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15 protocols using 4 oht tamoxifen

1

Colony Forming Assay for Murine and Human Cells

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CFU assay was performed as previously described73 (link). Briefly, for murine BM cells and MLL-AF9 transformed leukemia cells, 10,000 cells were plated on methylcellulose (Methocult M3434, Stem Cell Technologies), and colonies were scored 6-7 days after plating for murine BM cells. For Rbmxf/f Cre-ER cells, after 24 or 48 hours of 4-OHT Tamoxifen (Sigma-Aldrich) or ethanol treatment, 10,000 cells were plated on methylcellulose with 100 nM or 200 nM 4-OHT Tamoxifen (Sigma-Aldrich) or ethanol treatment. Colonies were scored 6 days after plating. For Rbmxl1 knockdown Rbmx deficient leukemic cells, 1,000 or 10,000 cells were plated with 3 μl/ml puromycin. For CB-CD34+ cells, 10,000 cells were plated on methylcellulose (MethoCult H4434, Stem Cell Technologies). Colonies (BFU-E, CFU-E, CFU-GM, and CFU-GEMM) were scored 14 days after plating.
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2

Colony Forming Assay for Murine and Human Cells

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CFU assay was performed as previously described73 (link). Briefly, for murine BM cells and MLL-AF9 transformed leukemia cells, 10,000 cells were plated on methylcellulose (Methocult M3434, Stem Cell Technologies), and colonies were scored 6-7 days after plating for murine BM cells. For Rbmxf/f Cre-ER cells, after 24 or 48 hours of 4-OHT Tamoxifen (Sigma-Aldrich) or ethanol treatment, 10,000 cells were plated on methylcellulose with 100 nM or 200 nM 4-OHT Tamoxifen (Sigma-Aldrich) or ethanol treatment. Colonies were scored 6 days after plating. For Rbmxl1 knockdown Rbmx deficient leukemic cells, 1,000 or 10,000 cells were plated with 3 μl/ml puromycin. For CB-CD34+ cells, 10,000 cells were plated on methylcellulose (MethoCult H4434, Stem Cell Technologies). Colonies (BFU-E, CFU-E, CFU-GM, and CFU-GEMM) were scored 14 days after plating.
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3

Rbmx Deletion in Cell Assays

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For deletion of Rbmx, cells were treated with 0 nM or 200 nM of 4-OHT Tamoxifen (Sigma-Aldrich). After 24- or 48-hours cells were plated for colony-forming unit assays.
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4

Rag1-deficient pro-B cell culture

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Rag1-deficient pro-B cells were cultured in OPTI-MEM in presence of 10% FSC, 2x Penicillin-Streptomycin-Glutamine (PSG), 50 μM beta-mercaptoethanol (β-ME) and IL-7 and SCF homemade cytokines. The GFP cassette from pRVGP and pRVGP-BB was replaced with hCD25 cassette to generate Ctrl-sh and Smarca4-sh. Retroviral supernatant was obtained through 293T transfection by the calcium phosphate method with Ctrl-sh and Smarca4-sh in conjunction with the packaging plasmid pCL-Eco. Two days post-infection, infected cells were enriched with hCD25 magnetic beads (Miltenyi biotech) on an autoMACS separator. Smarca4+/+ER-Cre and Smarca4fl/flER-Cre pro-B cells were cultured as the Rag1-deficient pro-B cells. The Cre recombinase was activated by adding 4-OHT tamoxifen (Sigma-Aldrich) at 0.33 μM to the medium.
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5

Rag1-deficient pro-B cell culture

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Rag1-deficient pro-B cells were cultured in OPTI-MEM in presence of 10% FSC, 2x Penicillin-Streptomycin-Glutamine (PSG), 50 μM beta-mercaptoethanol (β-ME) and IL-7 and SCF homemade cytokines. The GFP cassette from pRVGP and pRVGP-BB was replaced with hCD25 cassette to generate Ctrl-sh and Smarca4-sh. Retroviral supernatant was obtained through 293T transfection by the calcium phosphate method with Ctrl-sh and Smarca4-sh in conjunction with the packaging plasmid pCL-Eco. Two days post-infection, infected cells were enriched with hCD25 magnetic beads (Miltenyi biotech) on an autoMACS separator. Smarca4+/+ER-Cre and Smarca4fl/flER-Cre pro-B cells were cultured as the Rag1-deficient pro-B cells. The Cre recombinase was activated by adding 4-OHT tamoxifen (Sigma-Aldrich) at 0.33 μM to the medium.
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6

Angiogenesis Assay of Vegfr2 Mutant Embryos

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Vegfr2Y1212F/+ C57Bl/6: R26StopFLMYC allele mice and Vegfr2Y1212F/+ C57Bl/6: Cdh5‐CreER mice were put together for timed breeding. At E9.5, 100 μl of 4OHT‐tamoxifen (Sigma, H7904) (10 mg/ml dissolved in peanut oil) was injected intraperitoneally into pregnant females. At E11.5, embryos were harvested and stored on ice in PBS until prepared for collagen embedding by dissecting away the head and the tail of each embryo. Genotyping of the embryos was done using the embryonic tailpiece. The embryos were embedded between two layers of rat tail type I collagen (Life technologies) and cultured in DMEM supplemented with 15% FCS and 30 ng/ml VEGFA for 10 days. Samples were fixed in 4% PFA and analyzed by microscopy after immunostaining with antibodies. Tile scan z‐stack images were taken with a Leica TCS SP8 Confocal Microscope with PMT and HyD detectors and LAS X Navigator software (Leica). Image analysis was done using ImageJ software (NIH) on a 2,000 × 2,000 μm region of the sprouting front of each explant.
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7

Breast Cancer Xenograft Model with Tamoxifen and TCZ

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Female nude mice, aged 5 to 6 weeks, were used for this study. 1 × 107 cells were mixed with Matrigel (356234; BD Bioscience, Franklin Lakes, NJ, USA) at a ratio of 1:1 and the 100 µL cell mixture injected into the abdominal mammary fat pad of mice. When the tumors were palpable, mice were randomized into treatment and control groups where the treatment group received 0.5 mg of 4-OHT tamoxifen (H6278; Sigma, St. Louis, MO, USA) dissolved in ethanol and diluted in peanut oil (P2144; Sigma, St. Louis, MO, USA), and TCZ (1 mg/Kg and 2 mg/Kg) diluted in saline, given by subcutaneous injection. The mice were treated twice a week for 8 weeks.
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8

Rbmx Deletion in Cell Assays

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For deletion of Rbmx, cells were treated with 0 nM or 200 nM of 4-OHT Tamoxifen (Sigma-Aldrich). After 24- or 48-hours cells were plated for colony-forming unit assays.
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9

Inducible MYC Expression in Cell Lines

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Plasmid pBabepuro-myc-ER (#19128) was purchased from Addgene (Cambridge, MA, USA). U2OS, KMS27, and KMS28BM expressing MYC-ER (U2OS/MYC-ER, KMS27/MYC-ER, and KMS28BM/MYC-ER, respectively) were obtained through infection with the pBabepuro-myc-ER recombinant retroviral vector. Infected cells were selected using 1 µg/mL puromycin (Sigma-Aldrich, St Louis, MO, USA) and then cloned [17 (link),18 (link)]. U2OS/MYC-ER, KMS27/MYC-ER, and KMS28BM/MYC-ER were cultured with 1 µM 4OHT tamoxifen (Sigma-Aldrich, St Louis, MO, USA). Gene expression after 96 h (U2OS/MYC-ER), 72 h (KMS28BM/MYC-ER), or 6 h (KMS27/MYC-ER) of treatment was determined using real-time PCR.
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10

MCF10A Src-ER Cell Culture Protocol

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MCF10A Src-ER cells were grown as described previously (8 (link)). 293T and U2OS cells were grown in DMEM (Life Technologies), supplemented with 10% fetal bovine serum (Life Technologies), 100 units/ml penicillin, 100 μg/ml streptomycin, and 2 mml-glutamine (Life Technologies) at 37 °C in 5% CO2. For SILAC labeling, MCF10A Src-ER cells were grown for 7 days in arginine- and lysine-free F-12/DMEM (Thermo Fisher) supplemented with stable isotope-labeled arginine (R0 or R10) and lysine (K0 or K8) (CKGAS), dialyzed horse serum (Dundee Cell Products), and the same supplements as normal cell culture. The cells were treated with a final concentration of 1 μm tamoxifen (4-OHT; Sigma), for 48 h and 0.3 μm 5-AzaC (Sigma), 24 h prior to 4-OHT treatment.
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