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6 protocols using ipatasertib gdc 0068

1

Akt Inhibitor Evaluation in Cancer Cells

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RPMI1640 medium and penicillin‐streptomycin were purchased from Wako Pure Chemical Industries, Ltd (Osaka, Japan). FBS was obtained from Nichirei Biosciences Inc. (Tokyo, Japan). MTT was obtained from Sigma‐Aldrich (St. Louis, MO). Akt inhibitors afuresertib, Akti‐1/2, AZD5363, GSK690693, ipatasertib (GDC‐0068), MK‐2206, perifosine, PHT‐427, and TIC10 and PDPK1 inhibitor OSU‐03012 were obtained from Selleck Chemicals (Houston, TX). Propidium iodide (PI) was obtained from Merck Millipore (Billerica, MA). Annexin V (AxV)–FITC was obtained from MBL (Nagoya, Japan). All antibodies used in this study were purchased from Cell Signaling Technology Inc. (Beverly, MA).
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2

Synergistic effects of cell-cycle inhibitors

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Palbociclib was obtained from Pfizer (New York City, NY, USA). Danusertib (PHA-739358), alisertib (MLN8237), tozasertib (VX-680), CCT137690, everolimus (RAD001), MK-2206 2HCl, and ipatasertib (GDC-0068) were purchased from Selleckchem (Houston, TX, USA). For dose–response curves and synergy matrixes, cells were plated in triplicates in 96-well plates. ATP content was measured using CellTiterGlo (Fitchburg, WI, USA) according to the manufacturer’s instructions. IC50 determination was performed using GraphPad®. The percentage deviation from Bliss independency model [44 (link)] was determined via the following formula: Exy = Ex + Ey − (ExEy). E represents the effect on viability of drugs x and y, expressed as a percentage of the maximum effect. Cell cycle profiles were obtained by staining cells with propidium iodide (50 μg/mL) in hypotonic lysis solution (0.1% (w/v) sodium citrate, 0.1% (v/v) Triton X-100, 100 μg/mL RNAse) and incubating at 37 °C for 30 min before measurement via FACS.
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3

Characterization of B-ALL Cell Lines

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E2A-PBX1+ B-ALL cell lines RCH-ACV and 697, as well as E2A-PBX1- B-ALL cell lines REH and SEM were obtained from DSMZ (Braunschweig, Germany) in 2013, and were authenticated in 2020 in DSMZ. They were monitored to exclude mycoplasma contamination regularly. Culturing of human cells was performed as previously described [7 (link)]. RPMI-1640, IMDM, DMEM, and Opti-MEM mediums were obtained from Thermo Fisher (Waltham, MA, USA). Torin-1, everolimus (RAD001), ipatasertib (GDC-0068), alpelisib (BYL719), capivasertib (AZD5363) and idelalisib (CAL-101) were from Selleck Chemicals (Houston, TX, USA). FBS was from Sigma-Aldrich (St. Louis, WIS, USA).
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4

Cell Line Characterization and Drug Treatments

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Experiments were performed mostly using H1299 cells (non-small-cell lung carcinoma human cell line) [NCI-H1299 (ATCC® CRL5803™)], unless stated otherwise. Other cell lines used were MDM2/MDMX double KO H1299 cell line (44 (link)), A549 cells (Adenocarcinomic human alveolar basal cell line), U2OS cells (Human bone osteosarcoma epithelial Cell line), SAOS-2 cells (Human bone osteosarcoma cell line), A375 (p53WT), A375 (p53KO) (Human melanoma cell line) and Raji cells (type III latent Burkitt's Lymphoma). Cell lines were cultured in RPMI 1640 medium or in DMEM–Dulbecco's Modified Eagle Medium (for U2OS, A375 and A549 cell lines) supplemented with 10% fetal bovine serum, 2 mM L-glutamine, 100 U/ml penicillin, 100 μg/ml streptomycin (Invitrogen) and 5 μg/ml Plasmocin prophylactic (Invivogen). Cell lines were routinely checked for mycoplasma contamination using PlasmoTest kit (Invivogen). Drugs: MG132 (474790-5, Calbiochem), PI3Kδ inhibitor CAL-101 (S2226, Selleck Chemicals), PI-3065 (S7623, Selleck Chemicals), AKT kinase inhibitor Ipatasertib (GDC-0068) (SES22808, Selleck Chemicals), Doxorubicin (Sigma-Aldrich), Cycloheximide (C4859, Sigma-Aldrich).
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5

Triple-Negative Breast Cancer Cell Line Culture

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The TNBC cell line MDA-MB-231 was purchased by ATCC (Rockville, USA) and their brain-seeking subclone MDA-MB-231BR was a kind gift from Prof. Dr. Wikman-Kocher (Institute of Tumor Biology, University Medical Center Hamburg-Eppendorf (UKE), Hamburg, Germany). All cell lines were cultured in DMEM-medium (Gibco, ThermoFisher Scientific, Waltham, MA USA) supplemented with 10% (v/v) fetal calf serum (FCS) under standard conditions in a water-saturated atmosphere containing 5% CO2 at 37°C. Ipatasertib (GDC-0068) was purchased from Selleckchem (Cat.-No. S2808, Biozol, Eching, Germany, dissolved in Dimethylsulfoxide (DMSO)) and used in concentrations of 1 to 20 µM.
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6

Pharmacological Inhibition of PI3K/AKT/mTOR

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Recombinant human TNFα was purchased from R&D. The PI3K-inhibitors, Duvelisib (IPI-145) and Idelalisib (CAL-101), the AKT-inhibitor Ipatasertib (GDC-0068) and the mTOR-inhibitor Torin-1 were obtained from Selleckchem.
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