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Gcms qp2010 plus gas chromatograph

Manufactured by Shimadzu
Sourced in China, United States, Japan

The GCMS-QP2010 Plus is a Gas Chromatograph-Mass Spectrometer (GCMS) instrument manufactured by Shimadzu. It is designed to provide accurate identification and quantification of chemical compounds through the combination of gas chromatography and mass spectrometry technologies.

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5 protocols using gcms qp2010 plus gas chromatograph

1

Extraction and Analysis of Essential Oil

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Three portions of approximately 300 g of ground dried leaves were extracted for 2.5 h in a steam distillation glass distiller. The oil samples were pooled in ethyl ether, dried over anhydrous Na2SO4, filtered, and evaporated under vacuum and at low temperature, yielding 7.56 g (0.84% w/w) based on dry weight.
For the oil analyses by GC–MS (Shimadzu GCMS-QP2010 Plus Gas Chromatograph), a non-polar Rtx-5MS column (30 m × 0.25 mm × 0.25 μm) and the following analytical conditions were used: split ratio of 1/20, 250 °C for the injector, 250 °C for the ion source, and 280 °C for the interface. The oven temperature was programmed to 60 °C for the first 5 min, increasing at a rate of 3 °C/min to reach the final temperature of 240 °C. The components were identified based on the relative retention indices calculated using a series of n-alkanes (C8–C19) and the mass spectra from the apparatus database, followed by comparison with the published data [8 (link),17 ,18 ].
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2

Musk Dehydration and Chemical Analysis

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After microbial analysis, the rest of fresh musk was dried by exposure to phosphorus pentoxide (P2O5). We weighed the musk every 30 minutes until its weight ceased to change. Because a very small amount of musk remained for the mated group after bacterial DNA extraction and musk dehydration so we pooled three samples together (taking 0.07 gram of each sample, total 0.21 gram). After blending, each 0.1 gram of musk was dissolved in 2.5 ml absolute ethyl alcohol (purity > 99.7%) or 2.5 ml diethyl ether (purity > 99.5%), then extracted by ultrasonic for two hours. The dissolved samples were centrifuged at 13000g for 5 minutes and the liquid supernatant was used for chemical components analysis. The same method was applied for unmated (sample UM1, UM2 and UM3) males.
A Shimadzu GCMS-QP 2010 plus gas chromatograph (Shanghai, China), coupled to a Shimadzu QP 5000 mass spectrometer which was equipped with a split/split less injector and a DB5-MS column [(30 m × 0.25 mm i.d., 0.25 mm film thickness), (Agilent J&W, Agilent Technologies, CA, USA)] was used for the chromatographic analysis of the targeted compounds. The mass spectral data base NIST08.LIB was used to analyze the data. The confidence coefficient of the data above 80% was adopted.
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3

Volatile Organic Compounds Analysis by GC-MS

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Volatile organic compounds (VOCs) produced during the ozonation process were identified by thermal desorption unit ATD 650 (Perkine Elmer Corp., Shelton, CT, USA) combined with a GC-MS-QP2010 Plus gas chromatograph (Shimadzu, Kyoto, Japan) equipped with a DB-5MS 60 m × 0.32 mm × 0.5 µm column (Agilent Technologies, Santa Clara, CA, USA). ATD 650 was connected to GC-MS through a valve and a transfer line maintained at 210 and 215 °C, respectively. The conditions employed for the thermal desorption system were as follows: the desorption temperature and time were 250 °C and 10 min, respectively, the trap heat and cool temperature were 280 and −25 °C, respectively. Argon gas was used as the carrier gas with a flow rate of 1.5 mL min−1. The sequential programmed linear temperature was used in ATD 650 system as; (1) 5 °C min−1 to 120 °C (hold for 2 min); and (2) 10 °C min−1 to 260 °C (hold for 5 min). The ion source temperature was maintained at 200 °C and GC oven temperature was 40 °C (hold for 2 min).
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4

NMR and GC-MS Characterization Protocol

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The 1H (400 MHz) and 13C NMR (100 MHz) spectra were recorded using a 400 MHz Bruker NMR, Avance III 400 in CDCl3 containing tetra-methyl-silane (TMS; δ = 0.0) as an internal standard. Gas chromatography-mass spectrometry (GC-MS) was performed on a Shimadzu GC/MS-QP2010 Plus gas chromatograph mass spectrometer (Shimadzu Scientific Instruments, Inc., Columbia, MD). The GC2010 was equipped with an Rtx-5MS column (0.25 µm thickness, 30.0 meter, and diameter of 0.25 mm). The settings were as follows: column temperature was initially 40 °C with an injector temperature of 275 °C; the temperature was held at 40 °C for 4.0 min and then ramped at 10 °C min to 280 °C, and then to 300 °C at 2°C/min and held for 18 min. The ion source temperature was set at 250 °C and the interface at 275 °C. Mass was scanned from 50 – 750 m/z from 7.0 – 56.0 min with a scan speed set at 5000. High grade helium was used as the carrier gas and operated in the split-less mode with a pressure of 70.1 kPa, total flow of 14.4 mL/min, column flow was 1.03 mL/min, linear velocity was 36.7 cm/sec, and a purge flow of 3.0 mL/min. Final data were baseline corrected using an asymmetric least squares method implemented in Matlab [17 ].
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5

Essential Oil Extraction from P. substriata

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Fresh aerial parts (leaves and stems) of P. substriata (1.030 kg) were extracted for 5 hours using a Clevenger-type apparatus, to yield 4.2 g (yield of 0.41% m/m) of essential oil. The GC/MS analysis was performed using a Shimadzu GC/MS QP-2010 PLUS Gas Chromatograph (Shimadzu Corporation, Kyoto, Japan) coupled to a mass spectrometer operating at 70 eV, Rtx®-5MS Restek fused silica capillary column (5%-diphenyl-95%dimethylpolysiloxane) of 30 m × 0.25 mm i.d., 0.25 mm film thickness, and equipped with an autosampler AOC-20i (Shimadzu).
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