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2 protocols using goat anti rat igg h

1

Chromatin Immunoprecipitation (ChIP) Assay

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Antibodies used included anti-Flag (Sigma, F3165-5MG, clone M2), anti-MLL1C (Bethyl, A300-374A), anti-RbBP5 (Bethyl, A300-109A), anti-ASH2L (Bethyl, A300-112A), anti-WDR5 (Bethyl, A302-430A), anti-GFP (Clontech, 632377, clone JL-8), anti-trimethyl-Histone H3 (Lys4) (EMD Millipore, 07-473), anti-LANA LN53 (Millipore, MABE1109), goat anti-rat IgG (H + L) Alexa Fluor 488 (Invitrogen A11006), goat anti-rabbit IgG (H + L) Alexa Fluor 647 (Invitrogen A21245), human anti -LANA sera adsorbed against uninfected cell extract for western blot or affinity purified against carboxy-terminal LANA for ChIP, Anti-T7 tag® antibody (Abcam, ab9138), and anti-alpha-tubulin (Sigma T9026, cline DM1A).
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2

Immunolocalization of Cell Wall Epitopes

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Transverse sections (60 μm thick) of whole, debarked stems were treated with LM5 as described above, except incubations with MP-PBS and the antibodies were done at 30 °C and not at room temperature. Also the secondary antibody was goat anti-rat IgG (H + L chains) secondary antibody conjugated with alkaline phosphatase (0.2 mL; 1:100 dilution) (Invitrogen, New Zealand) in MP-PBS, and after the last PBS wash, the sections were treated for 15 min with substrate solution containing bromo-4-chloro-3-indolyl phosphate (BCIP), nitro-blue tetrazolium (NBT) and water (1:1:8 v/v) (BCIP/NBT substrate kit, Invitrogen). Alkaline phosphatase reacts with the substrate to produce an insoluble blue product. The sections were then washed in water (5×) before mounting in Aqua-Mount medium (Thermo Fisher, New Zealand). Control experiments were also done with the primary antibody omitted and the images recorded using a digital camera (see above).
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