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3 protocols using bca protein assay

1

Corneal Protein Expression Analysis

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Cornea tissues were collected and homogenized in RIPA (Beyotime, Shanghai, China) buffer with PMSF (Beyotime, Shanghai, China) (RIPA: PMSF = 100:1), and lysed on ice for 30 minutes. The supernatant was removed after centrifugation at 4°C (15 minutes as 12,000 rpm) and protein quantification was performed by BCA protein assay (ElabScience, Wuhan, China). Then transferred to an 0.22-µm polyvinylidene difluoride membrane (BioSharp, Tallinn, Harjumaa, Estonia) after separation by 12.5% sodium dodecyl-sulfate polyacrylamide gel electrophoresis. The membranes were blocked with 1% skim milk powder for 1 hour, the primary antibody against β-actin (1:5000 BioWorld, Nanjing, China), tumor necrosis factor (TNF)-α (1:1000; Abcam, Branford, CT) and IL-1β (1:1000 BioWorld) were applied sequentially with overnight incubations at 4°C, and the membranes were washed three times in Tris-buffered saline with Tween. The secondary antibody was incubated for 1 hour at room temperature, washed three times with -buffered saline with Tween, and blotted with chemiluminescence (ECL; Thermo Fisher Scientific, Waltham MA) for chemiluminescence observation.
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2

Western Blot Analysis of Apoptotic Pathways in HeLa Cells

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After being exposed to curdepsidone A, HeLa cells were collected and lysed in RIPA buffer (Biotech Well, Shanghai, China) on ice. After quantified with the BCA protein assay (Elabscience, Wuhan, China), each sample was added to 5 × loading buffer (Beyotime, Shanghai, China) and then heated at 100 °C to denature the protein. The proteins were electrotransferred to PVDF membranes (Millipore, Billerica, MA, USA) after the lysate proteins were separated via SDS-PAGE. The membranes were hybridized with the suitable primary antibodies in the blocking solution for an entire night at 4 °C after blocking for 2 h. After that, the membranes underwent three TBST washes, one hour of incubation at 37 °C with a suitable secondary antibody, and another three TBST washes. Lastly, the ECL Chemiluminescence Kit (Beyotime, Shanghai, China) was used to detect protein signals on BG-gdsAUTO 720 (Baygene, Beijing, China). The expression of GADPH is regarded as a loading control. The primary antibodies against p-PI3K and p-mTOR were purchased from Cell Signaling Technology. Caspase3, cl-Caspase3, caspase7, cyto-c, Apaf-1, LC3, PI3K, and mTOR were purchased from Abcam. GAPDH, CDK4, Cyclin D1, PARP, Bcl-2, Bax, Caspase9, Beclin-1, p62, AKT, and p-AKT were purchased from Proteintech.
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3

Measuring Fly Thorax ATP Levels

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The contents of ATP in the thoraces of flies were measured by a luciferin-luciferase system using the ATP Assay Kit (Biyuntian Co., Ltd., Shanghai, China). Protein content was determined using the BCA method (BCA protein assay, Elabscience, Wuhan, China). Thoraces of five 6-day-old flies were collected and homogenized in the lysis buffer, which was centrifugated at 12,000× g at 4 • C for 5 min. The supernatant was mixed with a luminescent solution and detected by a Luminometer (Molecular Devices, San Jose, CA, USA) [18] (link). ATP content was calculated as a percentage of total protein for each sample. Relative ATP contents were determined, and experiments were repeated at least three times.
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