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5 protocols using epr19828

1

Immunoblotting of Inflammasome Proteins

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Cell culture supernatant were precipitated with methanol and chloroform, as previously described, and resuspended cell extracts lysed in boiling lysis buffer [66 mM tris-Cl (pH 7.4), 2% SDS, 10 mM dithiothreitol, and NuPage LDS sample buffer; Thermo Fisher Scientific). Proteins were separated on 14% polyacrylamide gels and transferred onto nitrocellulose membrane using Trans-Blot Turbo (Bio-Rad). Antibodies for immunoblot were against GSDMD (1:3000; EPR19828, Abcam), caspase-1 p20 (1:1000; casper-1, AdipoGen), full-length caspase-8 (1:1000; 4927, Cell Signaling), cleaved caspase-8 (1:1000; 9429, Cell Signaling), caspase-3 (1:1000; 9662, Cell Signaling), pro–IL-1β (1:1000; AF-401-NA, R&D), IL-18 (1:1000; 5180r-100, BioVision), RIPK1 (1:1000; D94C12, Cell Signaling), c-FLIP (1:1000; Dave-2, AdipoGen), and alpha-tubulin (1:5000; DM1A, Abcam).
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2

Western Blot Analysis of Inflammasome Proteins

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Laemmli buffer (5x) was added to samples and boiled at 95°C for 10 min before resolving by SDS-PAGE. Resolved gels were transferred onto nitrocellulose or PVDF membranes using a Trans-Blot® Turbo Transfer System (Bio-Rad). Membranes were blocked in 5% (w/v) milk in PBS 0.1% Tween-20 (PBST) for 1 h at room temperature. Membranes were washed with PBST and incubated overnight with rabbit-anti-mouse IL-18 (1/1000 dilution; E9P50, Cell Signalling Technology, 57058), rabbit-anti-mouse capase-1 p10 (1/1000 dilution; EPR16883, Abcam, ab179515), mouse-anti-mouse NLRP3 (1/1000 dilution; Cryo2, Adipogen, AG-20B-0014), rabbit-anti-mouse gasdermin-D (1/1000 dilution; EPR19828, Abcam, ab209845), or goat-anti-mouse IL-1β (1/800 dilution; R&D Systems, AF-401-NA), primary antibodies were diluted in 5% (w/v) BSA in PBST. The membranes were washed and incubated at room temperature for 1 h with rabbit anti-mouse IgG (Agilent, P026002–2) or goat anti-rabbit IgG (Agilent, P044801–2), secondary antibodies diluted 1/1000 in 5% (w/v) BSA in PBST. Proteins were then visualized with Amersham ECL Prime Western Blotting Detection Reagent (Cytiva, RPN2236) and G:BOX (Syngene) and Genesys software. β-Actin (1/20000 dilution 5% (w/v) BSA in PBST; Sigma, A3854) was used as a loading control.
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3

Western Blot Analysis of Inflammasome Proteins

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Lysates and/or supernatants were assessed by western blot for NLRP3, IL-1β, caspase-1, and GSDMD. Samples were run on SDS polyacrylamide gels and transferred onto nitrocellulose or PVDF membranes using a semi-dry Trans-blot Turbo system (Bio-Rad) at 25 V. Membranes were blocked with 2.5% BSA in phosphate-buffered saline, 0.1% Tween 20 (Sigma) (PBST) for 1 h before overnight incubation at 4 °C with mouse anti-NLRP3 monoclonal antibody (Cryo2, Adipogen), goat anti-IL-1β polyclonal antibody (AF-401, R&D Systems), rabbit anti-caspase-1 + p10 + p12 monoclonal antibody (EPR16883, Abcam), or rabbit anti-GSDMD antibody (EPR19828, Abcam) in 2.5% BSA PBS-T. The following morning, membranes were washed (5 min, ×3) in PBST and subsequently incubated with either rabbit anti-mouse, rabbit anti-goat or goat anti-rabbit HRP antibodies (Dako) in 2.5% PBST for 1 h at room temperature. β-Actin was used as a sample loading control using a monoclonal anti-β-Actin-peroxidase antibody (Sigma). After washing, Amersham ECL prime detection reagent (GE Healthcare) was added to membranes and images were taken with a G:Box Chemi XX6 (Syngene) scanner.
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4

Quantification of IL-1β Secretion and Cell Lysis

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IL-1β secretion was quantified by ELISA (IL-1β Ready-SET-Go!; eBioscience), according to the manufacturer’s protocol. The release of LDH was quantified using the CytoTox96 nonradioactive cytotoxicity assay (Promega) and plotted as a percentage of total cellular LDH (100% lysis control). Cell lysates and cell-free methanol/chloroform-precipitated supernatants were analyzed by Western blot using standard methods (Gross et al., 2011 (link)) with antibodies against IL-1β (AF-401-NA, 1:1,000; R&D Systems), caspase-1 (casper-1, 1:1,000; AdipoGen), GSDMD (EPR19828; Abcam), and GAPDH (polyclonal rabbit antibody, 1:5,000; BioScientific).
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5

Immunoblotting for inflammasome activation

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Cell extracts were lysed in in boiling lysis buffer (66 mM Tris-Cl pH 7.4, 2% SDS, 10 mM DTT, 1x NuPage LDS sample buffer; Thermo Fisher) and resuspended with methanol/chloroform-precipitated supernatant. Mixed supernatant and extracts were separated on 14% polyacrylamide gels and transferred onto nitrocellulose membrane using Trans-blot Turbo (Bio-rad).
Antibodies for immunoblot were against caspase-1 p20 (casper-1; Adipogen; 1:1000), GSDMD (EPR19828; Abcam; 1:1000), pro-IL-1 (AF-401-NA, R&D; 1:1000), pannexin-1 (D9M1C; Cell Signaling; 1:1000) and alpha-tubulin (DM1A; Abcam; 1:5000).
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