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Tx 400 rotor

Manufactured by Thermo Fisher Scientific
Sourced in United States

The TX-400 rotor is a high-performance centrifuge rotor designed for Thermo Fisher Scientific's line of ultracentrifuges. It is capable of reaching a maximum speed of 100,000 RPM and can generate a maximum relative centrifugal force of 805,000 x g. The TX-400 rotor is suitable for a variety of applications that require high-speed separation and concentration of biological samples, such as proteins, nucleic acids, and organelles.

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5 protocols using tx 400 rotor

1

Isolation and Characterization of Exosomes

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Exosomes were isolated from the fresh or frozen cell culture supernatants as previously described 30 . Briefly, cells were removed by centrifugations at 300g for 10 min (TX-400 rotor, ST16R, Thermo Fisher, Massachusetts, USA). Subsequently, supernatants were centrifuged at 2,000g for 10 min to remove smaller cellular debris and at 10,000g for 30 min to remove apoptotic bodies (F15-6x100y rotor, ST16R, Thermo Fisher, Massachusetts, USA). Exosomes were then harvested by ultracentrifugation at 100,000g for 70 min in a swing rotor (SW32Ti, XPN-100, Beckman, California, USA). All centrifugation steps were performed at 4℃, and isolated exosomes were suspended in phosphate-buffered saline (PBS) and stored at -80℃. The protein content of exosome suspension was quantified using the bicinchoninic acid (BCA) assay (Beyotime, P0010, Beijing, China). The representative markers CD63 (1:1000, Abcam, California, USA) and CD81 (1:1000, Abcam, California, USA) of exosomes were assayed by Western blotting. Furthermore, the morphology and size distribution of exosomes were detected by transmission electron microscope (TEM) (JEM-1400, JEOL Ltd., Japan) and nanoparticle tracking analysis (Nanosight LM10, Malvern, Worchestershire, UK), respectively. The protein content of the MSC-Exo preparations was normalized to total protein content as quantified by BCA assay.
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2

Centrifugation Protocol for Unstable Batters

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Glassware: Kimax no. 45165 conical borosilicate glass centrifuge tubes (DWK Life Sciences, Millville, NJ, USA) (Fig. 1); graduation intervals: 0.5 mL (0–10 mL), 1 mL (10–50 mL); dimensions: 28.5 mm (O.D.) x 26 mm (I.D.) x 134 mm (length). These specific tubes were selected because (1) their internal diameter is similar to that of the top section of the Wierbicki tube (which facilitates entry of fritted glass disc and dispensing by syringe barrel), and (2) they begin to taper far enough away from their tip such that the fritted glass disc, when inserted, stops at near the 13-mL graduation mark, thus providing enough empty space below it for accumulation and measurement of released liquids. Prior experience has shown us that a minimum of 10 mL of empty volume below the fritted glass disk should be available to capture the liquids released by highly unstable batters. Tubes that begin to taper too close to the tip lack enough empty space and are, therefore, unsuitable for this method.
Sample size: 15.0 ± 1.0 g. Because this tube is smaller, it cannot accommodate a 25-g sample, like the Wierbicki tube can.
Centrifugation unit: Thermo Scientific Sorvall Legend X1R centrifuge (Thermo Electron LED GmbH, Osterode am Harz, Germany) equipped with a Thermo TX-400 rotor and Thermo 75003655 buckets.
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3

Formalin Fixation and Paraffin Embedding

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Fixed cells were pelleted using a Sorvall Legend X1R centrifuge mounted with a TX-400 rotor (Thermo Scientific) at 3000×g for 5 min. Supernatants were decanted and algal pellets resuspended in 1 mL of 10% neutral buffered formalin (Epredia™ HiPur™). Algal pellets were gross processed and embedded by HistoWiz Inc. using a Standard Operating Procedure and fully automated workflow. Paraffin blocks were sectioned in-house using a Leica microtome at a width of 4 μm followed by adhesion to charged slides (HistoBond®). Slides were stored at room temperature in the dark until further processing.
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4

Unrefined Green Lentil Fraction Extraction

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An unrefined fraction (UF) was obtained from green lentils after separation of soluble proteins as follows: 100 g of lentils were ground using a knife mill (RETSCH Knife Mill Grindomix GM200, Retsch, Haan, Germany) resulting in a coarse flour. Following grinding, 35 g of the lentil flour was slowly added to 350 mL distilled water while continuously adjusting the pH to 2.5 using 0.5 M HCl and stirred for an additional 60 min. The resulting suspension was centrifuged at 3600 rpm (2434×g) for 20 min (Heraeus Megafuge 16 R centrifuge equipped with a TX400 rotor, Thermo Scientific, MA, USA). The supernatant containing soluble protein was discarded, and the pellet collected and frozen (-80 • C) before freeze-drying (Alpha 1-2 LDplus freeze dryer, Martin Christ, Osterode, Germany). The preparation of the unrefined fraction was done twice to evaluate the reproducibility of the extraction method.
The obtained unrefined fraction was used for mechanical compression tests and microscopy. Due to the presence of few large particles (>0.5 mm), which could interfere with the rheological measurements, part of the unrefined fraction was sieved (Vibratory Sieve Shaker Analysette 3, Fritsch, Idar-Oberstein, Germany) through a 125 μm sieve, and used for rheology experiments and differential scanning calorimetry (DSC).
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5

Unrefined Green Lentil Fraction Extraction

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An unrefined fraction (UF) was obtained from green lentils after separation of soluble proteins as follows: 100 g of lentils were ground using a knife mill (RETSCH Knife Mill Grindomix GM200, Retsch, Haan, Germany) resulting in a coarse flour. Following grinding, 35 g of the lentil flour was slowly added to 350 mL distilled water while continuously adjusting the pH to 2.5 using 0.5 M HCl and stirred for an additional 60 min. The resulting suspension was centrifuged at 3600 rpm (2434×g) for 20 min (Heraeus Megafuge 16 R centrifuge equipped with a TX400 rotor, Thermo Scientific, MA, USA). The supernatant containing soluble protein was discarded, and the pellet collected and frozen (-80 • C) before freeze-drying (Alpha 1-2 LDplus freeze dryer, Martin Christ, Osterode, Germany). The preparation of the unrefined fraction was done twice to evaluate the reproducibility of the extraction method.
The obtained unrefined fraction was used for mechanical compression tests and microscopy. Due to the presence of few large particles (>0.5 mm), which could interfere with the rheological measurements, part of the unrefined fraction was sieved (Vibratory Sieve Shaker Analysette 3, Fritsch, Idar-Oberstein, Germany) through a 125 μm sieve, and used for rheology experiments and differential scanning calorimetry (DSC).
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