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23 protocols using alexa fluor 488 conjugated goat anti rabbit igg

1

Immunohistochemical Analysis of Neuronal Apoptosis

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Spinal cord sections prepared as described were fixed, blocked, and incubated with anti-NeuN (1:800, rabbit IgG; Abcam, USA) overnight at 4 °C. The sections were washed with PBS and incubated with Alexa Fluor 488-conjugated goat anti-rabbit IgG (1:200, Jackson ImmunoResearch, West Grove, PA, USA) for 2 h, and then reacted with the TUNEL reaction mixture (Promega) at 37 °C for 1 h. The nuclei were counterstained with DAPI. The proportion of TUNEL-positive neurons in each group of animals was counted under a fluorescence microscope.
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2

Immunofluorescent Staining of Cultured Neurons

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After washing in PBS for 5 min, cultured neurons were fixed in 4% paraformaldehyde for 30 min. Cells were then washed in PBS supplemented with 0.5% Triton for 15 min, incubated in 3% BSA for 30 min, and washed in PBS for 15 min. Cells were incubated overnight at 4°C with primary antibody (anti-MAP2, Sigma, 1:1,000) for 24 h followed by incubation with secondary antibody AlexaFluor 488-conjugated goat anti-rabbit IgG (1:500, Jackson, United States) for 1 h at RT. Cells were incubated with 4′,6-diamidino-2-phenylindole (DAPI, Life Technologies) for 5 min. Fluorescence images were observed using a microscope (Olympus, Tokyo, Japan).
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3

Immunofluorescence Staining for Hippocampal Neuron Purity

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After culturing, the purity of the hippocampal neuron was detected with neuron-specific enolase (NSE) overnight by immunofluorescence staining. Briefly, cells were fixed in 4% paraformaldehyde for 20 min. Cells were washed twice with PBS, permeabilized with 0.1% Triton X-100 (Sigma-Aldrich) in PBS for 5 min, and then blocked with 5% goat serum (Sigma-Aldrich) in PBS for 1 h. Subsequently, cells were incubated overnight at 4 °C with anti-NSE (1:300) antibody. Then they were washed with PBS and incubated with Alexa Fluor 488-conjugated goat anti-rabbit IgG (1:500, Jackson, West Grove, PA, USA) at 37 °C for 1 h. Coverslips were mounted to glass slides using ProLong Gold antifade reagent containing 4ʹ 6-diamidino-2-phenylindole (DAPI) and imaged using a fluorescence microscope (Zeiss, Jena, Thuringia, Germany).
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4

Immunofluorescent Staining of Paraffin Sections

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Immunofluorescent staining of paraffin sections was performed as described previously (Abler et al., 2011a (link); Mehta et al., 2011 (link)). Antibodies include: rabbit anti-CCND1 (Abcam #ab16663 Cambridge MA), mouse anti-CTNNB1 (BD Transduction labs # 610153, San Jose, CA), rabbit anti-KI67 (Abcam #ab15580), Alexafluor 488-conjugated goat anti-rabbit IgG (Jackson ImmunoResearch #115-547-003, West Grove, PA), Alexafluor 594-conjugated goat anti-mouse IgG (Jackson ImmunoResearch #111-516-045). Tissue sections were also stained with 4′,6-diamidino-2-phenylindole, dilactate (DAPI) to label cell nuclei.
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5

Immunohistochemical Analysis of ERα in Olfactory Brain

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Animals were anesthetized and transcardially perfused with phosphate buffer solution followed by 4% paraformaldehyde in phosphate buffer solution. Perfused brains were post-fixed in 4% paraformaldehyde for 1 day prior to being sectioned coronally at 100µm with a vibratome. Olfactory bulbs were sectioned on the parasagittal plane at 100 µm thickness. A subset of tissue sections was counter-stained for cell nuclei with TOPRO-3 prior to mounting on slides. Immunohistochemistry was performed on tissue sections as described above. Sections were bathed in 10% FBS in 0.5% TritonX-100/PBS blocking solution for one hour at room temperature. Sections were then incubated overnight at 4°C in rabbit polyclonal anti-ERα primary antibody (06–935, 1:1000; Millipore Sigma). Sections were then washed 3 times in 0.05% tritonX-100 in PBS (5 minutes; 20 minutes; 40 minutes) and incubated with an Alexa Fluor 488-conjugated goat anti-rabbit IgG (1:200; Jackson ImmunoResearch). Sections were then washed 3 times in 0.05% tritonX-100 in PBS (5 minutes; 20 minutes; 40 minutes) and mounted on slides for fluorescence microscopy. Analyses investigating the expression of ERα and sex differences in the number of arom+ neurons considered the entire contiguous population of arom+ neurons in the ventral MEA.
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6

Immunofluorescent Analysis of Lung Sections

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Lung sections were evaluated for proSP-C using a primary polyclonal anti-NproSP-C antibody and Alexa Fluor 488 conjugated goat anti-rabbit IgG (Jackson Immuno Research, 111-545-062, West Grove, PA, USA), as described previously [24 (link)]. Confocal images were acquired using a 488 nm laser line package of an Olympus Fluoview confocal system attached to an Olympus IX81 microscope (60× oil objective).
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7

Immunohistochemical and Western Blot Analysis of HBV Core Protein

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Tissues were fixed in 4 % paraformaldehyde for 1 h, then in 30 % sucrose solution overnight for cryoprotection. 10–12 μm thick sections were cut using a Leica cryostat. Immunohistological detection of HBcAg was performed on frozen sections using primary rabbit polyclonal anti-HBcAg antibody (1:200; Abcam, England) and Alexa Fluor 488-conjugated goat anti-rabbit IgG (1:200; Jackson ImmunoResearch, USA). Finally, the sections were stained with 4′,6-diamidino-2-phenylindole (DAPI) for nuclear indication. Immunofluorescence analyses were performed with a fluorescence microscope (Leica, German).
HBV core protein was also analyzed by a standard western blot procedure using primary polyclonal anti-HBcAg antibody (1:200; Abcam, England), anti-actin monoclonal antibody (1:1000; Santa Cruz Biotechnology, USA) and peroxidase-conjugated secondary antibodies. The image was digitized using a scanner and signal was quantified using of Quantity One software (Bio-Rad).
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8

Cystamine Dihydrochloride Assay for Fibrinogen

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Cystamine dihydrochloride was from Wako Pure Chemical Industries (Osaka, Japan) or Sigma (St. Louis, MO, USA); results were similar with both preparations. T101 was from Zedira (Frankfurt, Germany). Normal, pooled plasma was prepared from healthy donors as described [15 (link)]. Anti-fibrinogen polyclonal antibody from rabbit was from Dako (Carpinteria, CA, USA). AlexaFluor 488-conjugated goat anti-rabbit IgG was from Jackson ImmunoResearch Laboratories.
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9

Immunostaining of Retinal Explants

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After EF exposure, retinal explants were fixed with 4% paraformaldehyde (Polysciences, Philadelphia, PA, USA; 00380-1) for 30 minutes at room temperature and then rinsed twice with PBS. Retinal explants were then permeabilized with 0.3% Triton X-100 (VWR, Radnor, PA, USA) for 15 minutes, blocked with 5% horse serum (VWR) in PBS for 1 hour, and then incubated with mouse anti-MAP2 (1:500; Sigma-Aldrich Corp.; MAB3418) and rabbit anti-Tau (T6402, 1:200; Sigma-Aldrich Corp.) antibodies overnight at 4°C. Explants were rinsed with 0.05% Tween 20 (VWR, 97062-332) four times, then incubated with Alexa Fluor 488–conjugated goat anti-rabbit IgG (1:1000; Jackson ImmunoResearch, West Grove, PA, USA; 111-545-003) and rhodamine-conjugated goat anti-mouse IgG1 (1:1000; Jackson ImmunoResearch 115-295-205) secondary antibodies for 1 hour at room temperature. The explants were then rinsed six times with 0.1% Tween 20, stained with Hoechst for 10 minutes, rinsed twice again, and sealed under 1.5-mm coverslips with Antifade mounting medium (ProLong Gold; Life Technologies, Waltham, MA, USA) before imaging.
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10

Multiparametric Immunofluorescence Assay

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Anti-CD31 (1:500, M0834), anti-CD68 (1:50, M0876), anti-CD3 (1:50, M0742), anti-CD20 (1:50, CD20cy), and fluorescein isothiocyanate (FITC)-conjugated anti-fibrin (1:100, F0111) primary antibodies were purchased from Dako (Glostrup, Denmark); anti-SMA (1:1000, A5228) and β-tubulin III (1:1000, T5076) were obtained from Sigma-Aldrich (St. Louis, MO, USA); anti-collagen IV (1:50, 2150-0140) and anti-CD40 (1:100, MCA 1590) were purchased from AbD Serotec (Oxford, UK); anti-pERK1/2 (1:100, #9101) and anti-PTEN (1:500, #9559) were purchased from Cell Signaling Technology (Danvers, MA, USA); anti-HIF-1α (1:100, sc-10790) was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA); anti-MK2 (1:200, ADI-KAP-MA015) was obtained from Stressgen (Victoria, Canada). Alexa Fluor 488-conjugated goat anti-rabbit IgG, Alexa Fluor 488-conjugated goat anti-mouse IgG1a, Cy3-conjugated goat anti-mouse IgG2a and Alexa Fluor 647-conjugated donkey anti-rabbit IgG secondary antibodies were purchased from Jackson ImmunoResearch Laboratories (West Grove, PA, USA).
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