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9 protocols using deferoxamine

1

High-Purity Chemical Sourcing for Research

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All the chemicals were of high analytical grade and obtained from Sigma-Aldrich (St. Louis, MO, USA). Deferoxamine was purchased from Novartis Pharma AG (Basel, Switzerland).
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2

Ferrostatin-1 Inhibits Ferroptosis in Doxorubicin-Treated Cells

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Doxorubicin hydrochloride and ferritin from equine spleen were purchased from Sigma Aldrich (Shanghai, China). Erastin and ferrostatin-1 were obtained from Selleck (Shanghai, China). Deferoxamine was obtained from Novartis (Shanghai, China), glutathione reduced form (GSH) was purchased from Tokyo Chemical Industry (Shanghai, China). Fe3+(FeCl3·6H2O) was obtained from Sinopharm Chemical Reagent Co., Ltd, Float-A-Lyzer G2 Dialysis Cassettes (MWCO 3.5 kDa) and Tube-O-DIALYZER™ Micro Dialysis System (MWCO 50 kDa) were purchased from Sangon Biotech (Shanghai, China). PD-10 desalting columns were obtained from GE Healthcare. C11-BODIPY was obtained from Thermo Fisher. The kits for Cell Counting Kit-8 (CCK-8), enhanced BCA protein assay, and reactive oxygen species assay, anti-actin, goat anti-rabbit IgG (H + L)-HRP conjugate and goat anti-mouse IgG (H + L)-HRP conjugate were purchased from Beyotime Institute of Biotechnology (Jiangsu, China). Anti-GPX4 was obtained from Abcam. Anti-GPX4 and anti-actin were used as primary antibodies. Goat anti-rabbit IgG (H + L)-HRP conjugate and goat anti-mouse IgG (H + L)-HRP were used as secondary antibodies. All obtained chemicals were used without further purification.
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3

Preparation of Iron Chelation Agents

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Deferoxamine (Novartis Pharma SAS) was dissolved in sterile distilled water and deferasirox (Selleckchem S1712), was dissolved in dimethyl sulfoxide (DMSO) to a concentration of 300 and 50 mmol/L, respectively. Ironomycin was a kind gift of Raphaël Rodriguez team (11 (link)), this compound was dissolved in dimethyl sulfoxide (DMSO) to a concentration of 10 mmol/L. Other reagents: erastin (Selleckchem S7242, 10 mmol/L in DMSO), ferrostatin-1 (Selleckchem S7243, 50 mmol/L in DMSO), Q-VD Oph (SelleckChem S7311, 10 mmol/L in DMSO, 30′ pretreatment), iron(III) chloride hexahydrate (31232 Sigma Aldrich, 0.1 mol/L in water, 4 hours after treatment), reduced gluthatione GSH (Sigma Aldrich G4251, 0.1 M in PBS) H2O2 (Sigma Aldrich 216763), mafosfamide (surrogate of cyclophosphamide, Santa Cruz ChemCruz SC-211761, 10 mmol/L in saline water), gemcitabine (Sellekchem S1149, 50 mmol/L in saline water), doxorubicin (Sellekchem S1208, 20 mmol/L in DMSO), CldU (Abcam ab213715, 20 mmol/L), IdU (Abcam ab142581, 2 mmol/L), 3-methyl adenine (Merck, #189490), β-mercaptoethanol (Sigma, M3148), staurosporine (Selleckchem, S1421), ketokonazole (Sigma, UC280), Avasimibe (from Sigma, PZ0190), ibrutinib (from Sellekchem S2680), entospletinib (from Selleckchem, S7523), venetoclax (from Sellekchem, S8048), AZD-5991 (from Selleckchem, S8643), and A1155463 (from TargetMol, T6748).
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4

Murine Model for Neisseria meningitidis

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CB17/Icr-Prkdcscid/IcrIcoCrl female mice were grafted with human skin as described by Join-Lambert et al. [14 (link)]. Nm strains were grown overnight at 37°C on GCB agar plates prepared without iron and supplemented with deferoxamine (Desferal, Novartis) at a final concentration of 15 μM. Bacterial colonies were harvested and cultured in RPMI with 1% bovine serum albumin medium and 0.06 μM deferoxamine with gentle agitation to reach the exponential phase of growth. Bacteria were then resuspended in physiological saline. All mice received 10 mg of human holotransferrin (R&D Systems) administered intraperitoneally just before infection.
For the single infection model, six grafted mice were infected IV with 107 CFU of WT strain or the ΔMDA isogenic strain. The injected dose is just below the LD50. The numbers of CFU in blood and in the graft were determined at 1 and 18 hours.
To obtain a competitive index, three grafted mice were infected intravenously with a mix of 5.106 CFU of each strain. The numbers of CFU in the blood and in the graft were determined. The number of CFU corresponding to the ΔMDA strain was obtained by determining the number of spectinomycin resistant colonies. The competitive index was calculated by the ratio of [log (UFCZ5463ΔMDA)/log (UFCWT) in the blood or in the graft] on [log(UFCZ5463ΔMDA)/log(UFCWT) of the inoculum].
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5

Catecholamine and Iron Chelator Assay

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The catecholamines epinephrine (EPI, Figure 1(a)) and ISO (Figure 1(a)), copper chelator D-PA (Figure 1(c)), ferric chloride hexahydrate (FeCl3·6H2O), ferrous sulphate heptahydrate (FeSO4·7H2O), 3-(2-pyridyl)-5,6-diphenyl-1,2,4-triazine-4′,4′′-disulphonic acid sodium salt (ferrozine), sodium acetate, acetic acid, 4-(2-hydroxyethyl)-1-piperazineethanesulphonic acid (HEPES), HEPES sodium salt, hydroxylamine, salicylic acid, and 2,3-dihydroxybenzoic and 2,5-dihydroxybenzoic acids were purchased from Sigma-Aldrich (USA). Deferoxamine was purchased from Novartis (Switzerland), dimethyl sulfoxide (DMSO) was purchased from Avantor Performance Materials (USA), and methanol for HPLC was purchased from JT Baker (USA). The chemicals and solutions used for cellular cultivation (cultivation media, sera, etc.) were purchased from Sigma-Aldrich or Lonza Group (Switzerland).
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6

Precomplex Drugs Effects on Cells

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Drugs for precomplex experiment were first mixed with FeCl3 in 1:1 molar ratio and incubated at room temperature for 5 mins. Cells were treated at 70% confluence with the drugs or precomplexed drugs at their specified concentrations for 48 h in a 5% CO2, 37 °C incubator. Chemical compounds used: deferoxamine (Novartis NDC 0078-0467-91, Basel, Switzerland), deferiprone (ApoPharma, Toronto, ON, Canada), deferasirox (Novartis), Dp44mT (gift from Prof. Des Richardson, University of Sydney, Australia), C7, C7-1, C7-2, C7-3, C7-4, C7-5, C7-6 (ChemBridge, ID#5632947, ID#5636413, ID#6120380, ID#5631431, ID#5335854, ID#5630707, and ID#5636784, respectively), PD98059 (Merck 513000, Kenilworth, NJ, USA), romidepsin (Selleck S3020, Houston, TX, USA), 3-MA (Sigma Aldrich M9281, St. Louis, MO, USA), and chloroquine (Sigma Aldrich C6628).
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7

Phytochemical Isolation and Characterization

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Berberine Cl, isocorydine HCl, cupric sulfate pentahydrate (CuSO4 ∙ 5H2O), cuprous chloride (CuCl), DMSO, ferric chloride hexahydrate (FeCl3 ∙ 6H2O), ferrous sulfate heptahydrate (FeSO4 ∙ 7H2O), 3-(2-pyridyl)-5,6-diphenyl-1,2,4-triazine-4′,4′′-disulfonic acid sodium salt (ferrozine), hydroxylamine hydrochloride (hydroxylamine), hematoxylin, hydrochloric acid (HCl), BCS, sodium chloride (NaCl), sodium acetate, acetic acid, 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), HEPES sodium salt and trientine were purchased from Sigma-Aldrich (Czech Republic), while deferoxamine was from Novartis (Switzerland), boldine was from Carl Roth (Germany), glaucine was from Cayman Chemical (Ann Arbor, MI, USA) and galanthamine hydrobromide was from Changsha Organic Herb (Changsha, China). Chlidanthine and galanthamine were isolated from Chlidanthus fragrans herb [30 (link)], haemanthamine, lycorine and galanthine from Zephyranthes robusta (Herb. ex Sweet) [31 (link)], bulbocapnine, corydine, sinoacutine, canadine, corydaline, scoulerine, tetrahydropalmatine, allocryptopine and corycavamine from Corydalis cava (L.) [32 (link)], californidine iodide, eschscholtzine and protopine from Eschscholia californica [33 (link)], platycerine from Argemona platyceras [34 (link)] and sinactine, stylopine, cryptopine, fumaricine and parfumine from Fumaria officinalis L. [35 (link)].
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8

Organ Preservation Solutions for Transplant

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The HTK solution (Custodiol), the modified base solution, and the iron chelator LK 614 were donated by Dr Franz Köhler Chemie GmbH (Alsbach-Hähnlein, Germany). Glycine was obtained from Serva (Heidelberg, Germany), and deferoxamine (Desferal) was purchased from Novartis Pharma GmbH (Nürnberg, Germany). The composition of the respective solutions is presented in Table 1, and the assignment of groups and subgroups is summarized in Table 2.
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9

Iron Compounds Characterization Protocol

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All chemicals used were analytical grade and were used without further purification. Iron(iii) chloride (FeCl3), Iron(ii) chloride (FeCl2), sodium hydroxide, sodium nitroprusside dehydrate, potassium hexacyanoferrate(iii), tannic acid, ferrozine, HCl, nitric acid, n-BuOH, sodium borohydrate, sodium carbonate, aluminum chloride, potassium acetate, vitamin C, Na2EDTA and Folin–Ciocalteau, were purchased from Merck (Darmstadt, Germany). Quercetin, gallic acid and DPPH were purchased from Sigma (St. Louis, USA). Deferoxamine was purchased from Novartis Pharma AG, Basel, Switzerland. Iron dextran was purchased from Vifor Pharma, UK. Distilled deionized water was prepared using an Ultrapure™ water purification system, Millipore SAS 67120 (Millipore Inc., Molsheim, France). Fe3+ ion measuring kit was obtained from ZiestChem Diagnostics (Tehran, Iran). Normal saline was obtained from the Shahid Ghazi Pharmaceutical Company (Tabriz, Iran).
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