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28 protocols using 2 6 di tert butyl 4 methylphenol bht

1

Extraction and Analysis of Lipids

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All used reagents were GC or HPLC grade. Chloroform (cat no. 34854), methanol (cat no. 1.06018), hexane (cat no. 270504), acetonitrile (cat no. 20060.320), acetic acid (cat no. 45754), boron trifluoride in methanol (cat no. B1252), NaCl (cat no. S3014) and 2,6-Di-tert-butyl-4-methylphenol (BHT) (cat no. B1378), ethyl acetate (cat no. 34858), and hydrochloric acid (cat no. H1758) were purchased from Merck KGaA (Warsaw,Poland). Double-distilled water was obtained from a Milli-Q Water System (Millipore, Billerica, MA, USA). Buffers used for HPLC analysis were filtered through 0.22 µm nylon filters (Agilent).
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2

Synthesis and Characterization of Polymer Electrolytes

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4-Vinylbenzylchlorid ( 90 %, stabilized with 500 ppm tert-butylcatechol, Sigma Aldrich), 1-butylimidazole (> 99 %, Alfa Aesar, Haverhill, MA, USA), acetonitrile (> 99.7 %, VWR, Radnor, PA, USA), 2,6-di-tert-butyl-4-methylphenol (BHT, for synthesis, Merck, Darmstadt, Germany), diethyl ether ( 99.5 %, Acros Organics, stabilized with BHT), lithium bis(trifluoromethanesulfonyl)imide (LiTFSI, > 99 %, Acros Organics, Waltham, MA, USA), acetone (> 99.5 %, Acros Organics), n-pentane (>99%, VWR), 2,2′-Azobis(2-methylpropionitrile) (AIBN, 98 %, Merck), dimethylformamide (DMF, 99.8% , Acros Organics), methanol (> 99 %, Acros Organics), and tetrahydrofuran (THF, 99 %, Acros Organics) were used as received.
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3

Biochemical Reagents for Cell Research

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Urethane, ethyl carbamate, EC, CAS# 51-79-6; 3-methylcholanthrene, 3-methyl-1,2-dyhydrobenzo[j]aceanthrylene, MCA, CAS# 56-49-5; butylated hydroxytoluene, 2,6-Di-tert-butyl-4-methylphenol, BHT, CAS# 128-37-0; naphthalene, CAS# 91-20-3, and Hoechst33258 nuclear dye (CAS# 23491-45-4), were from Sigma-Aldrich (St. Louis, MO). Bleomycin A2, ((3-{[(2'-{(5S,8S,9S,10R,13S)−15-{6-amino-2- [(1S)−3-amino-1-{[(2S)−2,3-diamino-3-oxopropyl]amino}−3-oxopropyl] −5-methylpyrimidin-4-yl}−13-[{[(2R,3S,4S,5S,6S)−3-{[(2R,3S,4S,5R,6R)−4-(carbamoyloxy)−3,5-dihydroxy-6- (hydroxymethyl) tetrahydro-2H-pyran-2-yl]oxy} −4,5-dihydroxy-6-(hydroxymethyl) tetrahydro-2H-pyran-2-yl]oxy} (1H-imidazol-5-yl)methyl]−9-hydroxy-5-[(1R)−1-hydroxyethyl]−8,10-dimethyl-4,7,12,15-tetraoxo-3,6,11,14-tetraazapentadec-1-yl}−2,4'-bi-1,3-thiazol-4-yl)carbonyl]amino}propyl) (dimethyl)sulfonium; CAS #9041-93-4, was from Calbiochem (Darmstadt, Germany). D-Luciferin potassium salt, (4S)−2-(6-hydroxy-1,3-benzothiazol-2-yl)−4,5-dihydrothiazole-4-carboxylic acid, CAS #2591-17-5, was from Gold Biotechnology (St. Louis, MO).
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4

Lipidomic Analysis of Lp(a) and LDL

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Of the isolated Lp(a) and LDL, 20 µg of protein was diluted in 700 µL water and mixed with 800 µL 1 N HCl:CH3OH 1:8 (v/v), 900 µL CHCl3, 200 µg/mL of the antioxidant 2,6-di-tert-butyl-4-methylphenol (BHT; Sigma Aldrich), and 3 µL of SPLASH LIPIDOMIX Mass Spec Standard (# 330707; Avanti Polar Lipids). After vortexing and centrifugation, the lower organic fraction was collected and evaporated using a Savant Speedvac SPD111V (Thermo Fisher Scientific) at room temperature. The remaining lipid residue was stored at -20°C under argon. Lipid species were measured with a hydrophilic interaction chromatography (HILIC) liquid-chromatography tandem mass spectrometry (LC-MS/MS) method on a Nexera X2 UHPLC system (Shimadzu) coupled with hybrid triple quadrupole/linear ion trap mass spectrometer (6500+ QTRAP system; AB SCIEX), as described previously.24 (link) Lipids were quantified based on internal standard signals in accordance with the guidelines of the Lipidomics Standards Initiative (LSI; level 2 type quantification as defined by the LSI).25
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5

Quantitative Lipidomics Analysis Protocol

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The solvents n-hexane, 2-propanol (iPrOH), formic acid (FA), acetonitrile (ACN), and methanol (MeOH) of ultrahigh-performance LC/MS grade were purchased from Biosolve (Valkenswaard, Netherlands). Water was produced in-house with a Barnstead GenPure System from Thermo Scientific (Waltham, MA, USA). Methyl tert-butyl ether (MTBE) of pro analysis quality was obtained from Carl Roth (Karlsruhe, Germany). 2-Butanol of extra-pure quality was purchased from Thermo Fisher Scientific (Waltham, MA, USA). 2,6-Di-tert-butyl-4-methylphenol (BHT) of gas chromatography quality and EDTA of ACS reagent grade were purchased from Sigma-Aldrich (St Louis, MO, USA). Ethyl acetate and chloroform (CHCl3) of LC grade, zinc sulfate heptahydrate of pro analysis quality, and phosphate-buffered saline (PBS) of liquid, sterile-filtered, suitable-for-cell-culture grade were obtained from Merck Chemicals (Darmstadt, Germany). Tris (hydroxymethyl)aminomethane–HCl buffer was obtained from Bioanalytic (Umkirch, Germany). Unlabeled and deuterium-labeled PUFA and eicosanoid standards were purchased from Cayman Chemicals (Ann Arbor, MI, USA); the detailed information can be found in Table S1.
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6

Antioxidant Capacity Evaluation Protocol

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Absolute ethanol and hydrochloric acid were purchased from RCI Labscan Ltd. (Bangkok, Thailand). Trolox (6-hydroxy-2,5,7,8- tetramethylchroman-2-carboxylic acid), 2,2′-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) or ABTS, Folin-Ciocalteu reagent and 2,6-di-tert-butyl-4-methylphenol (BHT) was obtained from Sigma-Aldrich (St. Louis, MO, USA). Gallic acid, sodium carbonate, potassium persulfate and potassium chloride were procured from Merck (Darmstadt, Germany). Linoleic acid was purchased from TCI: Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan). Iron (II) chloride tetrahydrate was supplied from Qrec (Auckland, New Zealand). Ammonium thiocyanate was purchased from Ajax Finechem Pty Ltd. (Taren Point, NSW, Australia).
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7

Scallop-derived Plasmalogen Extraction

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The PUFA-plasmalogen (vinyl ether) derivative 1-(1Z-octadecenyl)-2-docosahexaenoyl-sn-glycero-3-phosphoethanolamine (PL-DHA-PE) and the fluorescent lipid 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-(lissamine rhodamine B sulfonyl) (ammonium salt) (18:1 Liss Rhod PE) were purchased from Avanti Polar Lipids, Inc. (Alabama). The composition of the scallop-derived plasmalogen extract was characterized by the provider as a mixture of ethanolamine vinyl ether phospholipid (49.4%), choline vinyl ether phospholipid (24.9%), cholesterol (16.0%), and ceramide aminoethyl phosphonate (9.7%). This natural plasmalogen combination with 70% vinyl ether phospholipid content is referred as scPL70. Monoolein (MO, C18:1c9, powder, ≥99%), retinoic acid (RA), vitamin E (VitE), 2,6-di-tert-butyl-4-methylphenol (BHT), and D-α-tocopherol polyethylene glycol-1000 succinate (TPGS-PEG1000) were purchased from Sigma-Aldrich. Water of MilliQ quality (Millipore Corp., Molsheim, France) was used for preparation of a phosphate buffer solution (NaH2PO4/Na2HPO4, 1 × 10−2 M, pH 7, p.a. grade, Merck).
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8

Lipid Extraction and Quantification

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700 μl of sample (4 μl of plasma diluted in water, or 700 μl of homogenized cells) was mixed with 800 μl 1 N HCl:CH3OH 1:8 (v/v), 900 μl CHCl3 and 200 μg/ml of the antioxidant 2,6-di-tert-butyl-4-methylphenol (BHT; Sigma Aldrich). 3 μl of SPLASH LIPIDOMIX Mass Spec Standard (#330707, Avanti Polar Lipids) was spiked into the extract mix. The organic fraction was evaporated using a Savant Speedvac spd111v (Thermo Fisher Scientific) at room temperature and the remaining lipid pellet was stored at - 20°C under argon.
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9

Lipidomics analysis of liver tissues

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Lipids were extracted from liver tissues by mixing 700 μL in water, homogenizing (Precellys, Bertin) with 800 μL 1 N HCl:CH3OH 1:8 (v/v), 900 μL CHCl3, 200 μg/ml of the antioxidant 2,6-di-tert-butyl-4-methylphenol (BHT; Sigma Aldrich) and 3 μL of SPLASH® LIPIDOMIX® Mass Spec Standard (#330707, Avanti Polar Lipids). After vortexing and centrifugation, the lower organic fraction was collected and evaporated using a Savant Speedvac spd111v (Thermo Fisher Scientific) at room temperature and the remaining lipid pellet was stored at - 20°C under argon. Just before mass spectrometry analysis, lipid pellets were reconstituted in 100% ethanol. Lipid species were analyzed by liquid chromatography electrospray ionization tandem mass spectrometry (LC-ESI/MS/MS) on a Nexera X2 UHPLC system (Shimadzu) coupled with hybrid triple quadrupole/linear ion trap mass spectrometer (6500+ QTRAP system; AB SCIEX). Detailed methods and data analysis are available in the supplemental methods. Lipidomics data is deposited at the NIH Common Fund’s National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org where it has been assigned Project ID (PR001085).
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10

Lipid Extraction and Methyl Esterification

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Chemicals used in this study were: Yeast Extract (Biokar Diagnostics, France); Peptone (Biokar Diagnostics, France); Glucose (Sigma, Germany); Chlormaphenicol (Biomatik, USA); Ethyl Methane Sulfonate (Sigma, Germany); Sodium Thiosulfate (Sigma, Germany); Sodium Phosphate (Sigma, Germany); Sodium Chloride (Sigma, Germany); 2,6-Di-tert-butyl-4-methylphenol (BHT) (Sigma, Germany); Methanol (Carlo-Herba, France); Hydrochloric acid 37% (Carlo Herba, France); n-Hexane (VWR chemical, France); Dichloromethane (VWR chemical, France); 2,2-dimethoxypropane (Sigma, Germany); Hydrochloric acid solution (Sigma, Germany); Sodium Methoxide solution (Sigma, Germany) and Nonadecanoic acid (Sigma, Germany).
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