The gene of invasion protein A (invA) was selected as the reference gene for amplification (GenBank accession no. NC_003197). Conventional LAMP primers were synthesized according to the previous report [32 (link)]. Inner primers incorporated with the recognition site (GAGTC) of nicking endonuclease, Nt.BstNBI, are termed as Nick-BIP and Nick-FIP. All the sequences were evaluated with IDT Oligo Analyzer 3.1 (Integrated DNA Technologies, Coralville, IA, USA). The oligonucleotides were synthesized by Sangon Biotech (Shanghai, China) Co., Ltd. Sequences used in this work are listed in
Scrfi
ScrFI is a Type II restriction endonuclease enzyme that recognizes and cleaves the DNA sequence 5'-CCNGG-3'. It can be used for a variety of DNA manipulation and analysis applications.
Lab products found in correlation
4 protocols using scrfi
Rapid LAMP Assay for Salmonella Detection
The gene of invasion protein A (invA) was selected as the reference gene for amplification (GenBank accession no. NC_003197). Conventional LAMP primers were synthesized according to the previous report [32 (link)]. Inner primers incorporated with the recognition site (GAGTC) of nicking endonuclease, Nt.BstNBI, are termed as Nick-BIP and Nick-FIP. All the sequences were evaluated with IDT Oligo Analyzer 3.1 (Integrated DNA Technologies, Coralville, IA, USA). The oligonucleotides were synthesized by Sangon Biotech (Shanghai, China) Co., Ltd. Sequences used in this work are listed in
Genotyping of IL-31 Gene Polymorphism
CCND1 G870A Genotyping by PCR-RFLP
Genotyping Polymorphism by PCR-RFLP
A 10 µl amount of specifically positive PCR products was digested overnight with 1 µl of ScrFI (New England Bio Labs, Beverly, MA) at 37°C, and the digested DNA fragments were resolved on 3% agarose gel. The randomly selected DNA samples amplified by PCR for each genotype were cross-checked by DNA sequencing, and the results were found to be 100% concordant [27] . The primers, length of PCR products and restriction enzymes are summarized in Table I. Genotypes were designated as follows: 99 bp and 201 bp for C/C; 99, 201 and 300 bp for C/G; and 300 bp for G/G. Figure 1 presents a representative electropherogram obtained after digestion of PCR products.
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