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Hrp conjugated streptavidin

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HRP-conjugated streptavidin is a protein complex consisting of streptavidin labeled with horseradish peroxidase (HRP). Streptavidin has a high affinity for biotin, and the HRP label enables colorimetric or chemiluminescent detection of biotinylated molecules.

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14 protocols using hrp conjugated streptavidin

1

Biotinylated Huntingtin Peptide Binding Assay

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A MaxiSorp 96-well plate was coated with a 50 μg/mL solution of purified antibody fragments in TBS, 50 μL per well, and incubated overnight at 4˚C. The wells were washed and blocked as above. The blocking solution was removed and the wells were incubated with serial dilutions of biotinylated htt peptide (MATLEKLMKAFESLKSFK(Biotin)-NH2; New England Peptide) in TBS for 1 h. The wells were washed 3x with TBST, then incubated with a 1:10,000 dilution of HRP-conjugated streptavidin (BioLegend) in TBS for 1 h. The wells were washed 3x with TBST, then developed, quenched, and absorbance read as above.
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2

ELISA Assay for Quantification of NPTX2

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Basically, the operation follows the regular process of ELISA. Briefly, 0.5 µg of rabbit anti-NPTX2 antibody in 50 mM Na2CO3 buffer (pH 9.5) was coated to the ELISA plate (Nunc) at 4°C for overnight. Next day, after treating with blocking solution (5% BSA in PBS) for 1 hr at RT, 100 ul of the series of diluted NPTX2 standard proteins or CSF samples were added into wells and incubated at RT for 1 hr with constant shaking. After washing with TBS, 100 ul of biotinylated mouse anti-NPTX2 antibody was added and incubated at RT for 1 hr. Then, 100 ul of HRP conjugated streptavidin (Biolegend, San Diego, USA) was added and incubated for 1 hr. After washing with TBS, 100 ul of DAB substrate (Biolegend) was applied and incubated for half hour at RT in dark. In the end, 100 ul of 4 M H2SO4 stopping solution was added and the absorbance was measured at 450 nm. The absolute levels of NPTX2 in CSF were determined by the calculation based on standard curve.
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3

Immunoprecipitation-based Protein Analysis

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Cells were lysed with TBS containing 1% NP-40 and a Protease Inhibitor Cocktail for Use with Mammalian cell and Tissue Extracts (Nacalai Tesque). After preclearing, cell lysate was incubated with TARM1-Fc- and IgG Fc (10 μg)-immobilized Protein A (10 μl)-Sepharose at 4 °C overnight. After washing, the slurry was boiled at 100 °C for 10 min with sodium dodecyl sulfate (SDS) sample buffer. The samples were centrifuged, and supernatants were subjected to SDS-polyacrylamide gel electrophoresis analysis followed by electroblotting analysis onto a polyvinylidene difluoride membrane. The membrane was blocked with 4% BlockAce (DS Pharma Biomedical Co., Osaka, Japan) and then incubated with 1 μg/ml biotin-conjugated anti-IIC antibody (clone, A2-10, F10-21, D8-6 and D1-2G; Chondrex, Redmond, WA; cat# 7006; lot# 150116) followed by HRP-conjugated Streptavidin (1:1000 dilution; BioLegend; cat# 405103; lot# 79004). Whole-cell lysate was also immunoblotted with anti-IIC (1 μg/ml) and anti-β-actin antibodies (1:5000 dilution; MBL, Aichi, Japan; cat# PM053; lot# 005). The membrane was incubated with ECL Prime Western Blotting Detection System (GE Healthcare, Little Chalfont, England), and chemiluminescent signal images were acquired using a digital imager, LAS4000 system (Fuji Film Life Science, Tokyo, Japan).
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4

Immunoprecipitation and Western Blot Analysis

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The sγc in supernatants of cultured cells were immunoprecipitated with α-mouse IL-2Rγ antibody (R&D systems) and protein A/G agarose beads (Santa Cruz Biotechnology). Immunoprecipitates were resolved by SDS-PAGE (Novex) under reducing by dithiothreitol (DTT) or non-reducing conditions and transferred to a polyvinylidene difluoride (PVDF) membrane (Amersham Biosciences). Blots were incubated with biotinylated α-mouse IL-2Rγ antibody (R&D systems), followed by HRP-conjugated streptavidin (BioLegend). The membranes were developed by enhanced chemiluminecence (ECL) reagents (GE Healthcare). The bands were detected using LAS-3000 Imaging system (Fujifilm).
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5

Quantifying Cytokine Levels in Cell Cultures

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Gas6, IL-10 and TNF-α levels were measured in supernatants of cell cultures using sandwich ELISA according to standard procedure [32 (link)]. Briefly, 96-well plates were precoated overnight with a capture antibody. Samples from cell culture supernatants were applied to precoated plates in duplicate. Serial dilutions of purified recombinant rhGas6 (R&D Systems) were used to construct a standard curve. Blank wells received serum-free X-Vivo™15 medium. A purified goat polyclonal anti-human Gas6 antibody (R&D Systems) was used for capture. Biotinylated goat polyclonal anti-human Gas6 antibody (R&D Systems), followed by HRP-conjugated streptavidin (Biolegend), was used for detection. The plates were developed with 3,3′,5,5′-tetramethylbenzidine substrate. The reaction was stopped with 2 N sulfuric acid. Absorbance was detected at 450 nm and read with a reference wavelength set at 570 nm using a VersaMAX ELISA microplate reader (Molecular Devices, Sunnyvale, CA, USA). The optical density for each point was the average of duplicate samples. Concentrations were determined using SoftMax software (Molecular Devices) by applying four-parameter logistic regression to the standard curve. IL-10 and TNF-α levels were measured using human IL-10 ELISA MAX Standard kit and TNF-α ELISA MAX Standard kit (Biolegend), following the manufacturer’s instructions.
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6

Cytokine Production Assay of Splenocytes

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Splenocytes were suspended in 1640 medium supplemented with 10% (v/v) fetal bovine serum (FBS) and penicillin–streptomycin (Thermo Fisher) at a final concentration of 1 × 107 cells/mL. Then, 1 × 106 cells were added to each well of a 96-well plate (Corning Inc., Corning, NY, USA). With 10 μL of PMA + ionomycin (stock solution concentrations: 500 ng/mL + 10 μg/mL; DAKEWE, Beijing, China) as positive control, gE was added to each well at a final concentration of 10 μg/mL. After incubation at 37 °C for 24 h in a 5% CO2 atmosphere, the supernatants of the cells were collected to test the contents of IL-2 and IFN-γ. Briefly, anti-IL-2 (3 μg/mL) and anti-IFN-γ (4 μg/mL) capture antibodies (Invitrogen, Carlsbad, CA, USA) dissolved in PBS were added to coat 96-well plates and incubated overnight at 4 °C. After blocking with 5% (w/v) skim milk at 37 °C for 1 h, 50 μL of cell supernatant was added to each well and incubated for another 3 h at room temperature. PBS-dissolved standard mouse IL-2 and IFN-γ proteins (PeproTech, Cranbury, NJ, USA) were used to generate standard curves. Biotin-conjugated detection antibodies specific for IL-2 or IFN-γ (2 μg/mL, Invitrogen, USA) and HRP-conjugated streptavidin (1 μg/mL, BioLegend, San Diego, CA, USA) were then added and incubated for 1.5 h. The results were detected as mentioned above in the ELISA analysis.
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7

Protein Extraction and Western Blotting

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Protein extraction and western blotting were performed as described (49 (link)). The following antibodies and dilutions were used: FLAG-BirA* fusion proteins were detected using mouse M2 anti-FLAG (1:1000; Sigma-Aldrich). Biotinylated proteins were detected using HRP-conjugated streptavidin (1:1000; BioLegend). Other antibodies used are BCL11A 382A (1:4000, Bethyl), NTHL1 (1:1000, Proteintech), anti-GST (1:1000, Abcam), anti-His (1:3000, Sigma), anti-HA (1:1000 Covance) and anti-γ-tubulin (1:10 000, Sigma). The AF3 BCL11A antibody was made by the McGill Animal Health Facility and raised against a His-tagged peptide of BCL11A (aa 370–509). The V5 antibody for Split Intein-Mediated Protein Ligation (SIMPL) was purchased from Protein Signaling and the Flag antibody was purchased from Sigma. Secondary HRP-conjugated antibodies are from Jackson Laboratories.
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8

Competitive ELISA for SARS-CoV-2 Spike RBD IgG

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Anti-SARS-CoV-2 Spike RBD IgG antibodies were tested in a competition ELISA to assess their ability to block the Spike protein RBD from binding to human ACE2 protein. In brief, the recombinant human ACE2 protein with a human Fc tag (ACE2-Fc) was coated onto the 96-well ELISA plates in coating buffer overnight at 4°C and blocked with 1% Casein. Then different concentrations of anti-SARS-CoV-2 Spike RBD IgG antibodies were pre-incubated with 0.5 nM biotinylated Spike protein RBD-mFc (Sino Biological, Cat#40592-V05H) for one hour at room temperature before they were added to the ELISA plates coated with ACE2-Fc. After one-hour incubation, the wells were washed with 0.05% PBST for five times and HRP conjugated streptavidin (Biolegend, Cat#405210) was added at a dilution of 1:3000, and incubated for another one hour before HRP activity was measured at 450 nm with addition of TMB substrate (Surmodics, BioFX®, Cat#TMBW-1000-01).
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9

Click-iT AHA Labeling for Measuring MYC Activity

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P493-6 cells were labeled with 50μM Click-iT AHA (L-azidohomoalanine) (Invitrogen) for 2 h at 37°C in methionine-free RPMI/1640 medium at two time points for MYC induction (0 h – MYC off, 24 h – MYC on). Manufacturer’s Click-iT labeling and protein detection protocols were followed with minor modification. Cells were lysed in 100 μL lysis buffer (1% SDS in 50 mM Tris-HCl, pH 8.0) for 15 min on ice, sonicated with a probe sonicator, and centrifuged at 19,400 × g at 4°C for 5 min. Supernatant containing protein was saved, and 60 μg of protein from each sample was added to the biotin alkyne detection reaction as specified in the protocol. A total of 30 μL (stock 200 μL) was run on an SDS-PAGE gel, and a Western blot was performed with probing using HRP-conjugated streptavidin (BioLegend) in 5% BSA for 1 h. Intensity was quantified using ImageJ.
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10

Repebody Binding Characterization by ELISA

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Binding property of designed and selected repebodies were analyzed by direct ELISA. Briefly, a 96-well Maxibinding plate was coated with extracellular domain of HER2 (10 µg/mL) at 4 °C overnight. PBST containing 1% BSA was used for blocking and dilution of repebodies and antibodies. PBST was used as washing buffer throughout the process. The repebody was detected by using HRP-conjugated anti-c-Myc antibody (1:500 dilution, Santa Cruz Biotechnology, Dallas, TX, USA) or biotinylated anti-repebody antibody (1 μg/mL, AbClon, Seoul, Korea) and HRP-conjugated streptavidin (1:1000 dilution, BioLegend, San Diego, CA, USA). For trastuzumab (Herceptin), HRP-conjugated anti-human Fc antibody (1:10000 dilution, Sigma Aldrich) was used. TMB solution was used for a signal generation and the reaction was stopped using 1 N H2SO4. The signals were measured at 450 nm by microplate reader, and absorbance from maximum concentration was converted to 100% for comparison. For binding specificity test against ErbB family proteins, EGFR, HER3 and HER4 proteins were used (10 µg/mL, Sino Biological).
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