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Cy3 coupled streptavidin

Manufactured by Jackson ImmunoResearch

Cy3-coupled streptavidin is a fluorescently labeled protein used in various biotechnological and research applications. Streptavidin is a tetrameric protein that binds strongly to the small molecule biotin. The Cy3 fluorescent dye is covalently attached to the streptavidin, allowing for the detection and visualization of biotin-labeled targets.

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3 protocols using cy3 coupled streptavidin

1

Apoptosis Detection via TUNEL and Caspase-3 Assay

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TUNEL assay: Detection of DNA fragmentation, a terminal deoxynucleotidyl transferase-mediated deoxyuridine triphosphate nick-end labeling (TUNEL) assay was performed by following the protocol of the TUNEL assay kit (Roche). Briefly, fixed cells or tissue samples were permeabilized with 0.2% TX-100 in PBS (30 min at room temperature), washed with PBS, incubated with 300 U ml−l TUNEL enzyme and 6 μmol l−1 biotinylated deoxyuridine triphosphate (Roche Diagnostics, Mannheim, Germany). The extremities of the biotin coupled DNA were revealed by using Cy-3-coupled streptavidin (1:1,000 in PBS, Jackson Immunoresearch). The slides were washed with PBS, DAPI-stained, then washed with PBS and finally, mounted with Fluoromount G (SouthernBiothec). Images were acquired with Zeiss Axiovision fluorescence microscopy and NIS element AR 4.20.01 Nikon fluorescence microscopy. Caspase-3 activity assay: Cells were first harvested by scraping. Cell pellets were obtained by centrifugation at 4 °C and lysed. The caspase 3 activity assay was performed according to the manufacturer’s instructions (Biovision caspase-3 colorimetric assay kit). Total protein concentrations were measured with the BCA assay kit using BSA as a standard (Pierce Biotechnology, Rockford, IL, USA). Absorbance readings were done on a TECAN infinite F500.
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2

Anterograde Neurobiotin Staining of OSNs

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Anterograde neurobiotin staining of OSNs was performed according to Ignell et al. (2005 (link)). Briefly, a glass capillary filled with dH2O was placed over the intact scapus for 2 minutes. The dH2O was then replaced with 4% neurobiotin in 1M KCl saline, and the capillary was put back over the scapus, and the open end sealed with Vaseline. The insect was kept in a humid chamber for 8 hours at 4°C to allow the neurobiotin to diffuse through the antennal nerve. Afterwards, each insect was dissected and all the brains were processed for sNPF immunocytochemistry as described above. Cy3-coupled streptavidin (1:300, Jackson ImmunoResearch), which was used to visualize neurobiotin, was added to the secondary antibody solution.
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3

TUNEL and Caspase-3 Apoptosis Assay

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P7 and P17 retinas were collected after fixation as described above. They were incubated for 2 h in 0.2% Triton X-100 PBS, washed three times with PBS and incubated for 10 min at room temperature in TdT buffer (30 mM Tris, 150 mM sodium cacodylate, 1 mM CoCl2, pH 7.5) and then for 120 min at 37 °C with the TUNEL enzyme (Roche, 1767305001; 6 μl per milliliter of TdT buffer) and Biotin-16 dUTP (Roche; 6 μM) in TdT buffer. The retinas were incubated in TB buffer (300 mM NaCl, 30 mM sodium citrate), washed in PBS and blocked in 2% BSA in PBS. Next, we incubated the retinas with Cy3-coupled streptavidin (Jackson Laboratory, 016-160-084) 1/1,000 in PBS and stained with Isolectin B4-FITC 0.01 mg/ml (Life Technologies, I21411). Retinal sections were incubated for 45 min in 0.2% Triton X-100 PBS and 1 h with TUNEL enzyme, Biotin-16 dUTP in TdT buffer.
We performed the in vitro apoptosis analysis using cleaved caspase-3 staining (Cell Signaling, 9661S) of confluent HUVEC monolayers. 24 h after siRNA transfection, the confluent cells were cultured for another 24 h with EBM2 or with EBM2 supplemented with 50 ng/ml VEGF-A, after which cleaved caspase-3 staining was performed.
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