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3 protocols using mouse anti fasn

1

Western Blot Analysis of Protein Expression

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Total protein from cells was extracted using radioimmunoprecipitation assay lysis buffer (Invitrogen; Thermo Fisher Scientific, Inc.) containing 60 µg/ml phenylmethylsulfonyl fluoride, according to the manufacturer's protocol. Protein concentration was determined using the Bradford assay. Proteins (10 µg) were separated by SDS-PAGE and transferred to polyvinylidene difluoride membranes. The membranes were probed with the following primary antibodies overnight at 4°C: mouse anti-NF-YA (1:500; catalog no. sc-17753; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), mouse anti-FASN (1:500; catalog no. sc-55580; Santa Cruz Biotechnology, Inc.) and mouse anti-β-actin antibody (1:2,000; catalog no. sc-47778; Santa Cruz Biotechnology, Inc.). Following incubation with a goat anti-mouse horseradish peroxidase-conjugated secondary antibody (1:5,000; catalog no. 610-103-043; Rockland Immunochemicals, Inc., Pottstown, PA, USA) for 1.5 h at room temperature, immunoreactive bands were visualized using an Enhanced Chemiluminescence reagent (Thermo Fisher Scientific, Inc.). The intensity of western blot bands was measured using ImageJ software version 1.48 (National Institutes of Health, Bethesda, MD, USA). Six independent experiments were performed over multiple days.
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2

Lentiviral Knockdown of Glut1 and Fasn

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Lentiviral vectors expressing the short hairpin RNAs (shRNAs) that target Glut1 (clone ID TRCN0000079328) or Fasn (clone ID TRCN0000075703) genes were obtained from Sigma (MISSION® TRC shRNAs). Lentiviruses were prepared in 293T cells by co-transfection of shRNA-encoding plasmids and helper plasmids such as pRSV-REV, pMDLg and pVSV-G (Addgene).
To generate knockdown (KD) macrophage cells, RAW 264.7 cells were infected with scramble (control, cat # SHC 201), Glut1, or Fasn shRNAs lentiviruses. After infection, cells were further incubated with puromycin (5 μg/ml, Invivogen), and KD of genes was confirmed by immunoblotting using rabbit anti-GLUT1 (Abcam) or mouse anti-Fasn (Santa Cruz Biotechnology) antibodies. GAPDH levels were detected as a loading control using anti-GAPDH antibody (Santa Cruz Biotechnology).
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3

Western Blot Analysis of Metabolic Regulators

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Equal amounts of proteins were separated by SDS-PAGE and electrotransferred to nitrocellulose membrane (GE-Healthcare Europe, Milano, Italy). Membranes were probed with rabbit anti-SREBP-1c (Abcam, Cambridge, UK), rabbit anti-SCAP (Abcam), rabbit anti-ACC and anti-pACCSer79 (Cell Signaling Technology, Danver, MA, USA), mouse anti-FASN (Santa Cruz Biotechnology, CA, USA), mouse anti-MHC I (Abcam), rabbit anti-MHC IIA (Novus Biologicals, Cambridge, UK), rabbit anti-MHC IIB (Proteintech, Chicago, IL, USA), rabbit anti-MHC (Abcam), mouse anti-CML (R&D System, Minneapolis, MN, USA), mouse anti-CEL (TransGenic, Kobe, Japan), mouse anti-RAGE (Abcam), goat anti-AGE-R1 (Santa Cruz Biotechnology) followed by incubation with appropriated HRP-conjugated secondary antibodies (BioRad, Hercules, CA, USA).
Proteins were detected with Clarity Western ECL substrate (BioRad) and quantified by densitometry using analytic software (Quantity-One, Bio-Rad). Results were normalized with respect to alpha-tubulin densitometric value.
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