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Purified calf thymus dna

Manufactured by Merck Group
Sourced in United States

Purified calf thymus DNA is a laboratory reagent used in various scientific applications. It is extracted and purified from the thymus gland of calves. The product provides a source of double-stranded DNA that can be used in experiments, assays, and research applications where a standardized DNA sample is required.

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3 protocols using purified calf thymus dna

1

Quantitative DNA Fluorescence Assay

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Five to 20 μl of each proteinase K-digested sample was loaded in technical triplicate on an ice-cold 96-well plate. After incubation with heparin (8.3 U ml−1 in PBS; Leo Pharma) and RNase solution (0.05 mg ml−1 in PBS; Sigma-Aldrich), 50 μl of ethidium bromide (25 μg ml−1 in PBS; GIBCO) was added to each sample. Using the Wallac 1420 VICTOR2 (PerkinElmer) apparatus, the ratio between the absorbance at 340 nm (extinction filter) and the absorbance at 590 nm (emission filter), corrected by the background (wells loaded with PBS only), was calculated. Purified calf thymus DNA (Sigma-Aldrich) was used to set the standard curve.
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2

Venom DNase Activity Assay Protocol

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0.05 µg/µl of crude venom in 1X phosphate buffered saline (PBS) was mixed with purified calf thymus DNA (Sigma-Aldrich, United States) and incubated at 37°C for 60 min to assess the DNase activity of N. sagittifera and N. naja venoms (Gerceker et al., 2009 (link); Senji Laxme R. R. et al., 2021 (link)). Post-incubation, these reaction mixtures were subjected to 0.8% agarose gel electrophoresis. GelRed (Sigma-Aldrich, United States) nucleic acid stain was used to visualise DNA in an iBright CL1000 gel documentation system (Thermo Fisher Scientific, United States). The percentage DNase activity of the venom samples, and that of the positive control, was calculated by densitometric analysis of the images using the ImageJ software (Schneider et al., 2012 (link))
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3

Assessment of Venom DNase Activity

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The DNase activities of the venoms were assessed using a method described by Gercerker et al. [25 (link)] with slight modifications [20 (link)]. A predefined concentration of crude venom (0.05 μg/μl) was incubated with purified calf thymus DNA (Sigma-Aldrich, USA), reconstituted in phosphate buffer saline (PBS), followed by incubation at 37°C for 60 mins. Reaction mixtures were then subjected to electrophoresis on a 0.8% agarose gel and visualised on an iBright CL1000 gel documentation system.
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