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2 protocols using cbdca

1

Evaluating BRCA2 Variant Sensitivity to PARP Inhibitors

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DLD1 BRCA2 (−/−) cells harboring 20 variants of BRCA2 cDNA and empty vector, untransduced DLD1 BRCA2 (−/ −) cells, and DLD1 parental cells were seeded in 96-well plates at a density of 2.0 × 103 cells/well with 100 µl of medium/well, and each drug was added at various concentrations: olaparib (50 nM–5 µM, Selleckchem), niraparib (10 nM–1 µM, Selleckchem), rucaparib (50 nM–5 µM, LC Laboratories), and CBDCA (50 nM–5 µM, Selleckchem). DMSO (Nacalai Tesque) was added to a final concentration of 0.01% (volume/volume) to wells without drugs. Ten microliters of PrestoBlue cell viability reagent (Thermo Fisher Scientific) was added to each well 144 h after exposure to these drugs, and fluorescence intensity was measured with a 2030 ARVO X3 microplate reader and PerkinElmer 2030 Software v4.0 (PerkinElmer) (excitation; 530 nm, emission; 590 nm)55 (link). Wells without cells were assessed as the negative controls, and survival data were graphically analyzed as a sigmoid curve by GraphPad Prism software v8.02 for Mac (GraphPad Software, Inc.).
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2

Evaluating Cytotoxicity and Apoptosis in HN-3 Cancer Cells

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The HN-3 cell line was obtained from the Asan Medical Center (Seoul, South Korea) (27 (link)). Hoechst 33342 dye, MTT and propidium iodide (PI) were purchased from Sigma-Aldrich (Merck KGaA, Darmstadt, Germany). CBDCA was purchased from Selleck Chemicals (Houston, TX, USA). Antibodies against cleaved caspase-3 (rabbit, cat. no. AB3623), cleaved poly(ADP-ribose) polymerase (PARP; rabbit, cat. AB3620) were purchased from Merck KGaA (Darmstadt, Germany); goat anti-epidermal growth factor receptor (EGFR; cat. no. sc-03-G; dilution 1:200) and phosphorylated c-Jun (p-c-Jun; cat. no. sc-99) were from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA); rabbit anti-GAPDH polyclonal antibody (cat. no. ab9485; dilution 1:2,000) was supplied by Abcam (Cambridge, UK). 2′,7′-dichlorodihydrofluorescein diacetate (H2DCFDA; D399) was purchased from Molecular Probes (Thermo Fisher Scientific Inc., Waltham, MA, USA).
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