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Apollo reaction cocktail

Manufactured by RiboBio
Sourced in China

The Apollo reaction cocktail is a laboratory reagent designed to facilitate the synthesis of specific molecular targets. It contains a proprietary blend of catalysts, cofactors, and other essential components required for the reaction process. The core function of this product is to provide a standardized and optimized mixture to support targeted molecular transformations in a controlled laboratory setting.

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44 protocols using apollo reaction cocktail

1

Quantifying INS1 Cell Proliferation

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INS1 cells were exposed to 10 mM 5-ethynyl-2′-deoxyuridine (EdU; (Cat No:C10310-3, RiboBio, China) for 2 h at 37 C° after transfection. Cells were then fixed in 4% PFA for 30 min and permeabilized with 0.5% Triton X-100. Next, the INS1 cells were incubated with the Apollo reaction cocktail (Cat No:C10310-3, RiboBio, China), then stained with Hoechst 33342 for 30 min for DNA content analysis. Finally, the EdU-stained cells were visualized under a fluorescence microscope (Nikon, Tokyo, Japan). The analysis of INS1 cells proliferation was performed using images of randomly selected fields obtained on the fluorescence microscope. The ratio of EDU positive INS1 cells were calculated using the following formula: EDU/Hoechst x 100%, and finally standardized to the control group.
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2

EdU Proliferation Assay in Myoblasts

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EdU assay was performed as previously described with the following modifications.29 (link) Twelve hours after transfection, primary myoblasts were exposed to 10 μM 5-ethynyl-2′-deoxyuridine (EdU; RiboBio) for 24 h at 37 °C, and the QM-7 cells were exposed to 50 μM EdU for 2 h at 37 °C. In addition, for primary myoblasts, 1 × Apollo reaction cocktail (RiboBio) was added to the cells and incubated for 30 min. Whereas, in QM-7 cells, 1 × Apollo reaction cocktail was added to the cells and incubated for 20 min. The EdU-stained cells were visualized under a Leica DMi8 fluorescent microscope. The proliferation rate was calculated by the number of EdU-stained cells normalized to the number of Hoechst 33342-stained cells.
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3

Myoblast Proliferation Assay Using EdU

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The primary myoblasts were exposed to 50 μM EdU (RiboBio, China) for 2 h at 37 °C after 48 h transfection. Subsequently, the cells were fixed in 4% paraformaldehyde for 30 min and neutralized using 2 mg/mL glycine solution, and then permeabilized by adding 0.5% Triton X-100. A solution containing EdU (Apollo Reaction Cocktail; RiboBio, China) was added, and the cells were incubated at room temperature for 30 min. The nuclear stain Hoechst 33,342 was then added, and incubation was continued for another 30 min. A fluorescence microscope (DMi8; Leica, German) was used to capture three randomly selected fields to visualize the number of EdU-stained cells.
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4

Quantifying Myoblast Proliferation by EdU Assay

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Myoblast cells were seeded in 12‐well plates. When the cells grew to a density of 50% confluence, they were transfected with overexpression plasmid, siRNA, or miRNA mimics. After transfection for 48 h, myoblasts were exposed to 50 μM EdU (RiboBio, China) for 2 h at 37°C. Subsequently, the cells were fixed in 4% paraformaldehyde for 30 min, neutralized using 2 mg/mL glycine solution, and then permeabilized by adding 0.5% Triton X‐100. A solution containing EdU (Apollo Reaction Cocktail; RiboBio, China) was added and the cells were incubated at room temperature for 30 min. The nuclear stain Hoechst 33342 was then added, and incubation was continued for another 30 min. A fluorescence microscope (DMi8; Leica, German) was used to capture three randomly selected fields to visualize the number of EdU‐stained cells.
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5

Visualizing HSV-1 Uptake in BMDCs

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EdU‐labeled HSV‐1 were obtained by propagating HSV‐1 in Vero cells cultured in DMEM containing 10% FBS and 25 µm EdU (C00052, RIBOBIO). The cells and the supernatants were collected for three freeze‐thaw cycles to obtain EdU‐labeled HSV‐1. The BMDCs were incubated with EdU‐labeled HSV‐1 and cell Mask Green at 4 °C for 1 h (attachment) or at 37 °C for 15–30 min (penetration). Subsequently, the cells were then fixed in 4% paraformaldehyde and stained with Apollo reaction cocktail (C00031, RIBOBIO) at room temperature for 30 min. Images were captured on a Leica SP8 fluorescence microscope and processed with the ImageJ software for quantitative analysis.
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6

EdU Incorporation Assay for DNA Synthesis

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Use 5-ethyl-2'-deoxyuridine (EdU) detection kit (EdU kit; Ribobio, Guangzhou, China) for determining DNA synthesis. Cells were firstly transfected, incubated with EdU for 2 h, and collected. Then, fix the cells in 4% formaldehyde for 20 min and permeabilize the cells. Wash the cells with PBS, treat the cells with 200 μl Apollo ® reaction cocktail (Ribobio) for 10 min, and permeabilize the cells. Stain the cells with 100 μl Hoechst 33,342 (5 μg/ml; Thermo Fisher Scientific). Observe the cells under a fluorescence microscope (Olympus, Tokyo, Japan).
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7

Granulosa Cell Proliferation Assay

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The GCs were seeded in 12-well plates (1× 106 viable cells/well in 12-wells). When the cells grew to a density of 50% confluence, they were transfected with overexpression plasmids or siRNA. After transfection for 24 h, GCs were exposed to 50 μM EdU (RiboBio, China) for 2 h at 37 °C. Subsequently, the cells were fixed in 4% paraformaldehyde for 30 min, neutralized using 2 mg/mL glycine solution, and then permeabilized by adding 0.5% Triton X-100. A solution containing EdU (Apollo Reaction Cocktail; RiboBio, Suzhou, China) was added, and the cells were incubated at room temperature for 30 min. The nuclear stain Hoechst 33,342 was then added and incubation was continued for another 30 min. A fluorescence microscope (DMi8; Leica, German) was used to capture three randomly selected fields to visualize the number of EdU-stained cells.
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8

Quantifying Adipocyte Proliferation

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After transfection for 48 h, intramuscular adipocytes were incubated at 37°C with 50 μM EdU (RiboBio, China) for 2 h, then cells were fixed with 4% PFA for 30 min and neutralized by 2 mg/mL glycine solution, permeabilized with 0.5% Triton X-100. Then cells were incubated with Apollo Reaction Cocktail (RiboBio, China) for 30 min at room temperature. The DNA was stained with DAPI (Beyotime) for 15 min. The EdU-positive cells were observation with a fluorescence microscope (Nikon, Tokyo, Japan).
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9

Measuring Cell Proliferation via EdU Labeling

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Cells were transfected with siRNAs (Mock-siRNA, siL21-1 and siL21-2) at a concentration of 40 nM for 72 h. The transfected cells were exposed to 50 μM of 5-ethynyl-2′-deoxyuridine (EdU) (RiboBio, Guangzhou, China) for 2 h at 37°C, and the cells were fixed in 4% paraformaldehyde for 30 min at room temperature, followed by the addition of 2 mg/ml glycine to neutralize the reaction. After permeabilization with 0.5% Triton-X, the cells were reacted with Apollo reaction cocktail (RiboBio, Guangzhou, China) for 30 min in the dark at room temperature. Subsequently, the DNA contents of the cells were stained with Hoechst 33342 for 30 min and visualized under a laser scanning confocal microscopy (Leica Microsystems, Buffalo Grove, IL, United States).
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10

Quantifying Cell Proliferation via EdU Assay

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A2780 cells were plated into 6-well plates at a density of 4x105 cells/well and incubated overnight at room temperature. Subsequently, each well was filled with 50 µM EdU solution (Beyotime Institute of Biotechnology) and further incubated for 4 h at 37˚C. After removing the working solution, cells were fixed with 4% paraformaldehyde for 15 min at room temperature and permeabilized with 0.5% Triton X-100 for 10 min at room temperature. Following addition of 100 µl Apollo® Reaction Cocktail (Guangzhou RiboBio Co., Ltd.), cells were incubated in the dark for 30 min at room temperature. The cells were observed under a fluorescence microscope (Olympus Corporation).
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