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5 protocols using na2s4

1

Quantification of Persulfide Species in Brain Cells

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After preincubation for 1 hr at 37 °C, 300 μl suspensions of brain cells were incubated for 15 min at 37 °C in the presence of 500 μM 3 MP (Sigma-Aldrich), or 500 μM Na2S (Wako). After the exposure to 3 MP or Na2S the suspensions of brain cells were centrifuged at 100 x  g for 30 sec, and the supernatant was removed. Cells were suspended in 300 μl basic medium containing 14 mM glucose in HBSS with Ca2+ and Mg2+, and removed the supernatant after centrifugation at 100 × g for 30 sec. This step was repeated three times to wash out 3 MP. Cells were sonicated in BHM solution and centrifuged at 15,000 × g for 10 min at room temperature. The supernatant was incubated in the presence of 125 mM CHES (pH 8.4) and 2 mM monobromobimane for 20 min at room temperature, and then acetic acid was added to the final concentration of 3% and incubated for 15 min on ice. The resulting reaction mixture was centrifuged at 15,000 × g for 10 min, and the supernatant was analyzed by LC-FL and LC-MS/MS. Na2S2, Na2S3, and Na2S4 for standard were obtained from Dojindo (Kumamoto, Japan).
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2

Sulfide Signaling Pathway Protocol

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SSP4 (3′,6′-di(O-thiosalicyl)fluorescein), Na2S2, Na2S3, and Na2S4 were purchased from Dojindo molecular Technologies Inc. (Rockville, MD, USA). MnTBAP, which is also a Mn porphyrin, but lacks appreciable SOD-mimetic activity [26 (link)] was purchased from Sigma–Aldrich (St. Louis, MO, USA), other MnPs were synthesized as previously reported [27 (link),28 (link)]. All other chemicals were purchased either from Sigma-Aldrich or ThermoFisher Scientific (Grand Island, NY, USA). Please note that we use H2S to denote the total sulfide added (sum of H2S + HS) usually derived from Na2S. Also, while S2− is often thought as part of the H2S + HS equilibrium, it does not exist under these conditions as the pK > 12 [29 (link)]. Phosphate buffer (PBS; in mM): 137 NaCl, 2.7 KCl, 8 Na2HPO4, 2 NaH2PO4. pH was adjusted with 10 mM HCl or NaOH to pH 7.4.
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3

Investigating Protein Interactions Using Biotin-Maleimide

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Dimethyl sulfoxide (DMSO), 1,4-NQ (98% purity determined by gas chromatography) and anti-GAPDH antibody were from Wako Pure Chemical Industries (Osaka, Japan), Tokyo Chemical Industries (Tokyo, Japan) and Santa Cruz Biotechnology (Santa Cruz, CA, USA), respectively. Biotin-PEAC5-maleimide (BPM) and Na2S4 were from Dojindo Laboratories (Kumamoto, Japan). Dynabeads M-280-sheep anti-rabbit immunoglobulin G (IgG) was from Invitrogen (Carlsbad, CA, USA). Anti-Akt, anti-CREB, anti-phosphorylated Akt (Ser473), anti-phosphorylated CREB (Ser133), horseradish peroxidase (HRP)-conjugated anti-biotin antibodies, anti-rabbit antibodies and anti-mouse IgG secondary antibodies were from Cell Signaling Technology (Beverly, MA, USA). Escherichia coli BL21 cells and trypsin were from Promega Co. (Madison, WI, USA). Glutathione 4B Sepharose was from GE Healthcare (Chicago, IL, USA). All other reagents were of the highest purity available.
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4

Synthesis of Sulfur-Infused Microporous Carbons

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A microporous carbon-supported cathode was prepared using the procedure reported previously.32 (link) After mixing sulfur (Wako Co.) and microporous carbon (Toyobo Co.), the mixture was heated to 155 °C for approximately 5 h to allow sulfur to diffuse into the microporous carbon. Finally, the temperature was increased to 300 °C and maintained for 2 h to sublime the extra sulfur on the outer surface of the microporous carbon. sulfur, Li2S6, Na2S4, Na2S2 and Li2S were used for the references of XAS. Li2S6 was synthesized through the previously reported procedure.26 (link) Stoichiometric ratio of sulfur and 1 M lithium triethylborohydride/tetrahydrofuran (3 : 1 mol%) was stirred for 1 hour and then the solvent was removed under vacuum inside Ar-filled glovebox. Na2S4 and Na2S2 were purchased from Dojindo Molecular Technologies Inc. sulfur and Li2S were purchased from Aldrich Co.
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5

Fluorescent Thiol Sensing Assay

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SSP4 (3',6'-Di(O-thiosalicyl)fluorescein), Na2S2, Na2S3 and Na2S4 were purchased from Dojindo molecular Technologies Inc. (Rockville, MD). Thioredoxin was purchased from ThermoFisher Scientific (Grand Island, NY). Carbon monoxide (CO, 1 mM), carbonyl sulfide (COS, 20 mM) and sulfur dioxide (SO2, 1.4 M) solutions were prepared by bubbling pure gas through a sintered glass aerator into buffer for 20–30 min. All other chemicals were purchased from Sigma-Aldrich (St. Louis, MO).
Phosphate buffer (in mM): 137 NaCl, 2.7, KCl, 8 Na2HPO4, 2 NaH2PO4, pH 7.4.
Sorensen's buffer in (mM): 200 Na2HPO4, 200 NaH2PO4, ratio sdjusted to pH 6, 7 or 8.
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