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11 protocols using cellular senescence detection kit spider βgal

1

Senescence Quantification in MSCs

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MSCs were seeded in confocal dishes. SA-β-gal staining of MSCs was performed with a Cellular Senescence Detection Kit-SPiDER-βGal (Dojindo, Shanghai, China) according to the manufacturer’s instructions. First, MSCs were treated with bafilomycin A1 for 1 h to block the activity of endogenous β-galactosidase. Then, cells were incubated with SPIDER-βGal working solution for 30 min in 37 °C, 5% CO2. After that, cells were co-stained with anti-p21 antibody (1:200, Proteintech, 27,296–1-AP). Thereafter, the dishes were viewed under a fluorescence microscope, and images were obtained using a Leica DMi8. SA-β-gal-positive and p21-positive cells were analyzed with ImageJ software 1.4.
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2

Cellular Senescence Detection via SA-β-Galactosidase

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SA-β-galactosidase staining was performed using a Cellular Senescence Detection Kit-SPiDER-βGal (Dojindo, Kumamoto, Japan) in accordance with the manufacturer’s protocol. Briefly, cells were incubated with Bafilomycin for 1 hour followed by SPiDER-βGal solution for 30 min. Cells were trypsinized and analyzed by flow cytometry (BD LSRFortessa Cell analyzer) and Flowjo software (FLOWJO, LLC). For cell sorting, samples were processed by BD FACSAria Fusion with 100 micron nozzle at 4°C.
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3

Senescence Induction and Quantification

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NHLF or SAEC were seeded at the density of 5 × 103 cells per well in 96-well plates. After 24-hour incubation, the medium was replaced with fresh complete DMEM, and the cells were treated with increasing concentrations of rGDF15 (62.5–500 ng/mL). After 1-hour incubation, a final concentration of 3 μM etoposide or the vehicle control (DMSO, 0.006% v/v) was added to the cells, and they were incubated for 24 hours. For RNA extraction using RNeasy 96 Kit (Qiagen), the cells were harvested by removing the medium and adding 100 μL of freshly prepared lysis buffer per well. The plates for immunostaining were fixed with 50 μL of 4% formaldehyde (VWR, 9713.1000) per well. After 15 minutes of incubation, the cells were washed 3 times with PBS and then sealed and stored at 4°C until staining. Prior to the SA–β-gal staining, the culture medium was discarded and the cells were washed with fresh cell culture medium. Then the cells were costained using Cellular Senescence Detection Kit–SPiDER-βGal (Dojindo, SG03-10) and Hoechst 33342 for nuclei detection. Next, the cells were directly imaged using ImageXpress Micro system, and the percentage of SA–β-gal+ cells was calculated using MetaXpress High Content Image Analysis Software.
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4

Flow Cytometric Analysis of Cellular Senescence

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SA-β-gal activity was analyzed using the Cellular Senescence Detection Kit—SPiDER-βGal (DOJINDO, Kumamoto, Japan) according to the manufacturer’s instructions. In brief, after treatment, cells were washed with HBSS (Sigma-Aldrich) and incubated with HBSS containing 0.1% Bafilomycin A1 for 1 h at 37 °C under a humidified atmosphere of 5% CO2/95% air. After incubation, the cells were further incubated with HBSS containing 0.1% Bafilomycin A1 and 0.1% SPiDER-βGal for 30 min at 37 °C under a humidified atmosphere of 5% CO2/95% air. After washing twice with HBSS, the cells were harvested, washed with HBSS, and suspended in HBSS. The fluorescence intensity of the SPiDER-βGal was analyzed using a flow cytometer (Cytomics FC500 with CXP software ver.2).
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5

Cellular Senescence Detection by Flow Cytometry

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Cellular senescence was evaluated using a Cellular Senescence Detection Kit SPiDER-β-Gal (Dojindo, Kumamoto, Japan) in conjunction with flow cytometry. Bafilomycin A1 working solution was added, after which the cells were incubated for 1 h in a 5 % CO2 incubator. Next, SPiDER-β-Gal working solution was added, and the cells were incubated for another 30 min. Staining for senescence associated-β-galactosidase (SA-β-gal) was evaluated by fluorescence microscopy, and assessed by flow cytometry.
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6

In-Chip Cellular Senescence Assay

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A cellular senescence assay was developed for in-chip measurements by adapting the Cellular Senescence Detection Kit – SPiDER-βGal (Dojindo Molecular Technologies, Inc SG04). Balifomycin A1 and SPiDER-βGal stock solutions were prepared in DMSO per manufacturer’s directions. The assay was performed by first incubating the chips with Balifomycin A1 (1:1000 dilution in media) for 1 hr at 37 °C. The solution was removed, replaced with 30 μL of media containing Balifomycin A1 (1:1000 dilution) and SPiDER-βGal (1:500 dilution), and incubated for 45 min at 37 °C. Chips were washed twice with media and imaged using a fluorescence microscope with a Texas Red filter (Excitation/Emission: 580 nm/604 nm).
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7

Senescence Analysis of Swine MSCs

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Cellular senescence of swine Obese- versus Lean-MSCs was evaluated by senescence-associated-β-Galactosidase (SA-β-GAL) staining (Cellular Senescence Detection Kit-SPiDER-βGal; Dojindo, Cat.#SG04) according to the vendor’s protocol. At least 20 fields/sample were captured under fluorescence microscopy at 40X magnification; SA-β-GAL + cells were counted and normalized to the number of DAPI-stained nuclei. p16/CDKN2A immunofluorescent staining (Abcam; Cat.#ab118459) was performed following standard protocol, and the percentage of positively stained area was quantified in fluorescence microscopic images (40X magnification) using ZEN® 2012 blue edition (ZEISS, Munich, Germany) [15 (link)].
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8

Immunohistochemical Analysis of p16Ink4a and p19Arf in Mouse Lungs

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Bacterially produced full-length mouse p16Ink4a was used to immunize rabbits, and antibodies were affinity purified. Frozen lung sections (8 μm in thickness) were immunostained using p19Arf (1:100 dilution, sc-32748, Santa Cruz Biotechnology) and p16Ink4a antibodies. Sections were visualized using Alexa Fluor 647-conjugated anti-rat IgG (1:1000 dilution, 712-606-150, Jackson ImmunoResearch) and Alexa Fluor 488-conjugated anti-rabbit IgG (1:1000 dilution, 711-545-152, Jackson ImmunoResearch). Sections were counterstained with DAPI. SA β-gal staining was performed using a Cellular Senescence Detection Kit—SPiDER βGal (SG03, Dojindo).
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9

Senescence Detection in BM-MSCs

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Senescence-associated β-galactosidase (SA-β-gal) activity was measured using a Cellular Senescence Detection Kit – SPiDER-βGal (Dojindo, Kumamoto, Japan) according to manufacturer’s instructions. Stained cells were analyzed using a CytoFLEX (Beckman Coulter, Brea, CA, USA). A positive control for the SPiDER-βGal assay was prepared by treating BM-MSCs with hydrogen peroxide (H2O2; Wako, Osaka, Japan) as follows: BM-MSCs (clone1) were treated with 25 μM H2O2 for 1 h at 37°C. The cells were washed with DMEM and cultured in culture medium (DMEM) with 10% FBS (HyClone), 1 ng/mL b-FGF (Miltenyi Biotec), 0.1 mg/mL kanamycin (Invitrogen), and 1% GlutaMAX (Invitrogen) at 37°C for 23 h. The H2O2 treatment was repeated 3 times.
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10

Cellular Senescence Detection via SA-β-Galactosidase

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SA-β-galactosidase staining was performed using a Cellular Senescence Detection Kit-SPiDER-βGal (Dojindo, Kumamoto, Japan) in accordance with the manufacturer’s protocol. Briefly, cells were incubated with Bafilomycin for 1 hour followed by SPiDER-βGal solution for 30 min. Cells were trypsinized and analyzed by flow cytometry (BD LSRFortessa Cell analyzer) and Flowjo software (FLOWJO, LLC). For cell sorting, samples were processed by BD FACSAria Fusion with 100 micron nozzle at 4°C.
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