The largest database of trusted experimental protocols

24 protocols using ab49945

1

Histological Analysis of Articular Cartilage Repair

Check if the same lab product or an alternative is used in the 5 most similar protocols
At different time points, the repaired knees (n = 5 in each group) were harvested and fixed in 10% neutral buffered formalin for 48 h. Subsequently, whole specimens were demineralized in a decalcifying solution (ZSGB-BIO, Beijing, China) for two weeks. The decalcified specimens were then trimmed, dehydrated in a graded ethanol series, and embedded in paraffin. Serial sections of 5-μm thickness were cut and stained with hematoxylin and eosin (H&E) and toluidine blue (TB). Immunohistochemistry analysis was performed using antibodies against type II collagen (Invitrogen, MA5-13026, Carlsbad, CA, United States), type I collagen (Sigma-Aldrich, C2456, St. Louis, MO, United States), and type X collagen (Abcam, ab49945). A modified scoring system (Supplementary Table S3) was used to assess the histological repair outcomes of articular cartilage defects (Wakitani et al., 1994 (link)). Histological evaluation was performed by the same 2 observers in a blinded manner.
+ Open protocol
+ Expand
2

Chondrocyte Marker Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunofluorescence staining was adopted to assess the expression level of chondrocyte markers type I collagen (Col1), type II collagen (Col2), and type X collagen (Col10). After differentiation of the cells at days 7, 14, and 21, the cells were fixed in 4% paraformaldehyde, followed by permeabilization with 0.5% Triton X-100 in phosphate-buffered saline (PBS). After being washed, the cells were blocked with 1% bovine serum albumin (BSA) in 0.3 M of glycine and incubated with primary antibody against Col1 (AB34710 at 1:500 dilution, Abcam, Cambridge, United Kingdom), Col2 (AB34712 at 1:250 dilution, Abcam, United Kingdom), and Col10 (AB49945 at 1:1,000 dilution, Abcam, United Kingdom) overnight at 4°C. An Alexa Fluor® 488-conjugated goat anti-rabbit IgG and an Alexa Fluor® 594-conjugated goat anti-mouse IgG were used as the secondary antibody. The cellular nuclei were counter-stained with DAPI (Sigma, USA). The immunofluorescence was observed with a Nikon-Ti inverted fluorescence microscope (Nikon, Tokyo, Japan).
+ Open protocol
+ Expand
3

Immunocytochemistry for Chondrocyte Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cultures were fixed in 4% (w/v) paraformaldehyde for 15 minutes. HIF-1α and Collagen Type II were then detected using h-206 (Santa Cruz) and ab34712 (Abcam) (respectively), overnight, following blocking with (10%) goat serum (Sigma Aldrich) for 60 min and permeabilisation in 0.1% (v/v) Triton X-100 solution (Sigma Aldrich) for 60 min, both at room temperature (RT). Collagen Type X was detected using ab49945 (Abcam) at a 1:250 dilution overnight. Rabbit-derived primary antibodies were visualised with ab150077 (Abcam) after staining for 60 min at RT at dilutions of 1:000 and 1:200 for Collagen Type II and HIF-1α, respectively. Mouse-derived primary antibodies were detected with biotin (ab6788, Abcam) and Streptavidin (S11223, Thermo Fisher Scientific) both at 1:350 for 60 min. Cultures were counterstained with 0.1μg/ml DAPI for 60 min to visualise nuclei and fluorescence was imaged on an Axiovert200M microscope (Zeiss). The images in Supplemental Figure 1 confirm that signal was due to each primary antibody and not background fluorescence or non-specific binding of the secondary antibody.
+ Open protocol
+ Expand
4

Immunohistochemical Evaluation of Collagen

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunohistochemical evaluation, primary antibody, rabbit anti-col II (abcam, ab34712), rabbit anti-col I (abcam, ab34710) and mouse anti-col X (abcam, ab49945) were used in the present study. The goat anti-rabbit IgG H&L (HRP) (abcam, ab6721) was used as secondary antibody. The sections were first incubated with 0.4% pepsin (Roche) at 37°C for 1 h for antigen retrieval. The 3% H2O2 solution was used to block the endogenous peroxidase, and 1% BSA (Sigma) was applied to block nonspecific protein binding. The sections were first incubated with primary antibody overnight at 4°C, followed by the incubation with secondary antibody for 1 h at room temperature. Then, the color was developed by using the DAB substrate system.
+ Open protocol
+ Expand
5

Immunohistochemical and Immunofluorescence Analysis of Cartilage Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
The paraffin sections were baked at 65 °C overnight. Slides were then deparaffinized and rehydrated. Dako endogenous blocking reagent (S2003, Dako, Carpinteria, CA, USA) was then used to quench endogenous peroxidase for 15 min. Non-specific binding sites were blocked with 1:10 normal horse/goat serum (S-2000, Vector Laboratories, Burlingame, CA, USA) for 30 min at room temperature. Primary antibodies: 1:400 dilution of MMP13 (ab39012, Abcam, Cambridge, UK), 1:1 000 dilution of ColX (ab49945, Abcam, Cambridge, UK); 1:400 dilution of Admts4 (ABT178, Millipore, Billerica, MA), and 1:500 dilution of Adamts5 (ab41037 Abcam, Cambridge, UK) were added, and the slides were incubated at 4 °C overnight. For IHC assays, the secondary biotinylated goat anti-mouse antibody (BA-9200, Vector Laboratories) at the dilution of 1:200 was added for 30 min on the second day, followed by incubation with 1:250 streptavidin (21130, Pierce, Rockford, IL, USA) for 30 min. Positive staining was detected by Romulin AEC Chromagen (Biocare Medical RAEC810L, Concord, CA, USA). For IF staining, an appropriate secondary antibody conjugated to a fluorescence probe was added, incubated at room temperature for 1 h, rinsed in PBS, and mounted in an anti-fading mounting media (Vector Laboratories, Burlingame, CA). Results were obtained using an Olympus BX43 upright microscope (Olympus Optical, Tokyo, Japan).
+ Open protocol
+ Expand
6

Cartilage Histological Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
After micro-CT scanning, samples were then dehydrated in graded alcohol, decalcified. Before sectioning, samples were embedded in wax. Finally, samples were sectioned for H&E, safranin O, and IHC staining ab34712 (Abcam) for collagen II and ab49945 (Abcam) for collagen X according to the vendor’s protocol.
+ Open protocol
+ Expand
7

Characterization of BM-MSC Engineered Constructs

Check if the same lab product or an alternative is used in the 5 most similar protocols
BM-MSC seeded constructs (Day 28) were analysed for DNA and sGAG content. Prior to performing assays, constructs were enzymatically digested with papain (125 ​μg/ml - Sigma) in a buffer containing 100 ​mM Sodium Phosphate (Sigma) with 5 ​mM Na2EDTA (Sigma) at pH 6.5 as previously described [42 (link)]. sGAG quantification was performed using a DMMB assay as described previously. Quantification of dsDNA in the digested constructs was performed using a Quant-iT Pico Green dsDNA kit (Invitrogen) according to the manufactures protocol. Calcium content of constructs was determined by a calcium liquid colormetric assay as per the kit manufactures instructions (Sentinel Diagnostics). For histological analysis, samples were fixed with 4% paraformaldehyde (Sigma). Samples were dehydrated and wax embedded. Embedded constructs were then sectioned at a thickness of 5 ​μm using a microtome. Sections were stained with 1% Alcian blue to examine sulfated glycosaminoglycan (sGAG) and picrosirius red to examine collagen deposition. To identify the specific collagen types present in the constructs, immunohistochemistry was performed to detect collagen type I (Abcam ab90395 1:400), collagen type II (Santa Cruz-sc52658 1:400), and collagen type X (Abcam ab49945 1:200) as previously described [28 ].
+ Open protocol
+ Expand
8

Immunostaining Protocol for Cartilage Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
H&E, immunofluorescence (IF) and immunohistochemistry (IHC) staining was performed using a standard protocol as previously reported [86 ]. Primary antibodies are as follows: mouse anti-rat Collagen type II (Col II; ab34712, 1:100, Abcam, UK), rabbit anti-rat Collagen type X (Col X; ab49945, 1:200, Abcam, UK), rabbit anti-rat CD68 (ab283654; 1:200, Abcam, UK), rabbit anti-rat CD11b (ab133357; 1:200, Abcam, UK), rabbit anti-rat CD44 (ab41478; 1:200, Abcam, UK), mouse anti-rat CD90 (ab181469; 1:200, Abcam, UK). A horseradish peroxidase-streptavidin detection system (Dako, USA) was used for IHC staining. ImageJ was used to perform the semi-quantitative and quantitative analysis of obtained pictures.
+ Open protocol
+ Expand
9

Immunofluorescence Analysis of Spinal Chondrocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Spine tissues of P7 CKO and WT newborn mice were collected, and 6-μm frozen sections were prepared. The sections were permeabilized with 0.1% Triton X-100 for 5 min and blocked in 5% BSA for 30 min at room temperature. Then, sections were incubated with primary antibodies against mouse MAPK7 (Cell Signaling Technology, 3372s; 1:200), COL10A1 (Abcam, ab49945; 1:500), RUNX2 (Abcam, ab192256; 1:400), MMP13 (Abcam, ab39012; 1:400), PTEN (Cell Signaling Technology, 9559s; 1:400), p-AKT (Cell Signaling Technology, 9018s; 1:200), MEF2C (Cell Signaling Technology, 5030s; 1:200), HIF1α (Cell Signaling Technology, 36169s; 1:200), and Cre recombinase (Abcam, ab216262; 1:500) overnight at 4 °C. The following incubation with the secondary antibody Alexa Fluor 594 goat anti-rabbit IgG (Invitrogen, S11227; 1:1000) was performed at room temperature for 1 h. Nuclei were labeled with DAPI (Sigma, SLCJ8103) for 5 min. The immunofluorescence staining images were captured with fluorescence microscopy (Olympus, BX63, Japan) and quantified using Image J software.
+ Open protocol
+ Expand
10

Chondrogenic Differentiation and Hypertrophy Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
After cell cultivation and pre-implantation, a number of grafts were
fixed in a 10% formalin solution and decalcified using a 0.5M EDTA
solution. Grafts were embedded in paraffin and sectioned in 5 micron slices.
Immunohistochemistry and histology were performed on the sections to ensure
first chondrogenic differentiation and then hypertrophic maturation. To
demonstrate chondrogenic differentiation, deposited GAG was visualized using the
typical alcian blue staining protocol widely available. Hypertrophic chondrocyte
maturation was demonstrated by collagen type × immunohistochemistry
staining. Staining occurred by first removing ECM components by incubating
slides in hyaluronidase (Hyaluronidase Type IV, H3884, Sigma, St. Louis, MO) for
45 minutes, followed by Pronase E (Pronase E, P5147, Sigma, St. Louis, MO)
treatment for another 45 minutes. Slides were then blocked with 0.3%
hydrogen peroxide in absolute methanol for 30 minutes before following the
Vectastain Elite Universal staining kit (Vector Laboratories, Burlingame, CA).
Anti-collagen × antibody was obtained from Abcam (ab49945, Cambridge,
MA), and incubated on slides overnight at 4 degrees Celsius. Pre-implantation
cellular confirmation of the tissue-engineered graft is shown in Figure 2 by hematoxylin and eosin
staining.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!