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10 protocols using ab2770

1

Immunofluorescence Imaging of Placental AhR

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Placental villi fixed in 4% paraformaldehyde were included in 5% agarose, sliced in 100 µm sections using a vibratome and permeabilized in 0.5% triton X-100 in PBS for 30 min. Sections were saturated with a solution of 3% bovine serum albumin (BSA) and triton 0.1% X-100 in PBS for 4 h and then incubated overnight at 4 °C under agitation either with the primary antibody, with non-specific rabbit IgG1, or with a mixture of the anti-AhR antibody at 1 µg/mL and the corresponding antigen at 10 µg/mL (APREST78064, Sigma-Aldrich) that correspond to the sequence between 721 and 820 amino acids (C-terminus) of human AhR. Primary antibodies used were: 1 μg/mL anti-AhR antibody #WH0000196-M2, #A9359, #HPA029722, and #HPA029723 (Sigma-Aldrich), #Ab2770 (Abcam, Cambridge, United Kingdom), and 0.75 µg/mL anti-Cytokeratin 7 (#M7018, Dako, Les Ulis, France). After washing, the sections were incubated with Alexa Fluor 555 donkey anti-mouse and Alexa Fluor 488 goat anti-rabbit antibodies in 1% PBS-BSA for 2 h at room temperature. Nuclei were stained with DAPI for 5 min and Vectashield was used as mounting media for confocal microscopy images (Leica TCS SP2 confocal microscope, Leica Microsystems, Nanterre, France).
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2

Quantifying AhR and pSmad2/3 in WI-38 Cells

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WI-38 cells were fixed with BD Cytofix/Cytoperm solution for 30 min and then incubated with specific first antibody or isotype control for 30 min at 4°C in the dark. Then the cells were washed and incubated with fluorescent-conjugated second antibody. The following antibodies were used: anti-AhR (ab2770, Abcam) and anti-pSmad2/3(cell signaling). The samples were then analyzed on a FACSCalibur flow cytometer (BD Biosystems).
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3

Antibody Validation in Cell Lines

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All the antibodies used in the study were purchased from Abcam: anti-NCOA7 (ab103993, 1/50), anti-Ki67 (ab15580, 1/100), anti-AHR (ab2770, 1/500), anti-CCND1 (ab6152, 1/500), and anti-beta Tublin (ab6046, 1/500).
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4

Immunoblot Analysis of HIF-1α and AhR

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Immunoblot analysis was carried out as previously described [21 (link)] using 3-5×105 cells. Rabbit anti-human HIF-1α (cat. # 3716S, Cell Signaling, Danvers, MA) and mouse anti-human AhR (cat. # ab2770, Abcam, Cambridge, MA) or aryl hydrocarbon receptor nuclear translocator (ARNT, clone # 775146, R&D Systems) primary antibodies were applied at 1/2,000, 1/5,000 and 2 μg/ml respectively. HRP-labeled goat anti-mouse (for AhR and ARNT, Thermo Fisher Scientific) and mouse anti-rabbit (for HIF-1α, Thermo Fisher Scientific) secondary antibodies (Thermo Fisher Scientific) were used at 1/50,000. Bands were visualized using Super Signal West Femto Sensitivity Substrate (Thermo Fisher Scientific) according to the manufacturer’s instructions. For immunoblot normalization, the same cell lysates were also tested for β-actin (cat. # ab8226, Abcam) antibodies at 1/10,000 and, subsequently, with an HRP-labeled goat anti-mouse antibody at 1/20,000 (Thermo Fisher Scientific). Band density was measured by Image J software.
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5

Immunofluorescence Staining of Cultured Cells

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Cultured cells were fixed with 10% formalin at room temperature (RT) for 10 minutes and permeabilized for 5 mins with PBS containing Triton X100 and BSA buffer (0.3% TTX, 1% bovine serum albumin: TTX/BSA buffer). The cells were further blocked in 10% blocking serum for 30 min and then incubated with first antibody for 1 hour at RT. After washing with PBS, cells were incubated with fluorescent labelled secondary antibodies for 30 minutes at RT. Nuclei were counterstained with DAPI. Sections were subsequently dehydrated, mounted, and observed under the fluorescent microscope. The following antibodies were used: anti-AhR primary antibody (Abcam, ab2770, 1 : 20); anti-α-SMA (Abcam, ab32575); and anti-vimentin (eBioscience).
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6

Duodenal AhR Expression in Celiac Disease

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Immunohistochemistry was performed on archival formalin-fixed paraffin-embedded duodenal sections of 4 patients with active CD and 4 controls. The sections were deparaffinized and dehydrated through xylene and ethanol and the antigen retrieval was performed in citrate buffer (pH 6.0) for 20 min in a microwave. Immunohistochemical staining was performed using a mouse monoclonal antibody directed against human AhR (ab2770, 1:150 final dilution; Abcam, Cambridge, MA, USA) at room temperature for 1 h followed by a biotin-free HRP-polymer detection technology with 3,3'diaminobenzidine (DAB) as a chromogen (UltraVision kit, Lab Vision, Fremont, CA, USA). The sections were counterstained with haematoxylin, dehydrated, and mounted. Isotype control IgG-stained sections were prepared under identical immunohistochemical conditions as described above, replacing the primary AhR antibody with a purified control isotype (R&D Systems).
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7

Immunoblot Analysis of HIF-1α and AhR

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This immunoblot assay involved antibodies against HIF-1α and AhR (with normalization to β-actin). The lysate proteins from the tumor samples were separated by electrophoresis in an SDS 8% polyacrylamide gel and transferred to a polyvinylidene difluoride membrane via semidry transfer in a Trans-Blot Turbo system (Bio-Rad). Antibodies against HIF-1α (cat. # ab16066, Abcam) and against AhR (ab2770, Abcam) served as primary antibodies. Peroxidase-labeled secondary antibodies were utilized too. The results were visualized by chemiluminescence using the ECL Kit (Bio-Rad Laboratories). The experiments were performed in triplicate.
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8

Immunofluorescence Assay for Caco-2 Cells

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The confluent Caco-2 mono-layers cultured on glass bottom cell culture dish were treated as described above and then rinsed three times in PBS, fixed with 4% paraformaldehyde at 4°C for 20 min, and then permeabilized using 0.2% Triton X-100 in PBS at room temperature for 30 min. Following blocking in 5% BSA at room temperature for 2 h, monolayers were incubated with mouse anti-AhR antibody (ab2770; 1:50; Abcam), rabbit anti-Notch1 intracellular domain (NICD1) antibody (D1E11; 3608; 1:50; Cell Signaling Technology, Inc.), rabbit anti-ZO-1 (21773-1-AP; 1:50) and rabbit anti-occludin (13409-1-AP; 1:50) antibodies (both from ProteinTech) at 4°C overnight. Monolayers were then washed three times and incubated with fluorescein isothiocyanate-conjugated goat anti-mouse (A0568; 1:300) or Cy3-conjugated goat anti-rabbit (A0516; 1:300) secondary antibodies (Beyotime Institute of Biotechnology) for 1 h. DAPI (1 mg/ml; Invitrogen; Thermo Fisher Scientific, Inc.) was used for nuclear staining at room temperature for 10 min. Following extensive rinsing, the images were captured using a laser scanning fluorescence microscopy (TCS SP5; Leica Microsystems GmbH).
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9

Western Blot Experiment Protocols

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Western blot experiments were performed as previously described (48 (link)) using the following antibodies: AhR (1:1,000, ab2770; Abcam, Paris, France), GPR30 (1:1,000, NBP1-31239; Novus Biologicals, Littleton, USA), α-tubulin (1:10,000, T5168; Sigma), phospho-p42/44 MAPK (1:1,000, 9106; Cell Signaling), p42/44 MAPK (1:1,000, 9102; Cell Signaling, Danvers, USA).
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10

Cytospin Immunostaining of Myeloid Cells

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Cytospin preparations of moDCs, LCs, MUTZ-3, THP-1 and U937 (~ 0.1 x 10 6 cells) were stained with monoclonal antibodies against CYP1A1 (ab3568), CYP1B1 (ab33586) and AhR (ab2770) (Abcam, Cambridge, UK) each for 1 h and protein expression was detected using a labeled streptavidin-biotin in Minimum Essential Medium alpha (MEM-α) + GlutaMAX™ (Gibco/Invitrogen, Darmstadt, Germany) supplemented with ribonucleosides and deoxyribonucleosides, 20% FCS (Biochrom, Berlin, Germany), 2 mM L-Glutamine (Life Technologies, Darmstadt, Germany), 50 µM β-mercaptoethanol (Sigma-Aldrich, Munich, Germany) and 10% of conditioned medium from the renal cell carcinoma cell line 5637 at 37°C in a 5% CO2 humidified incubator. Cells were subcultured at a split ratio of 1:2 twice per week. Cells were stimulated with benzo[a]anthracene on days 6 -7.
5637, a renal cell carcinoma cell line, was purchased from the German Collection of Microorganisms and Cell Cultures (Braunschweig, Germany, ACC35) and was cultured in RPMI medium supplemented with 10% FCS. The cells were subcultured at a split ratio of 1:4 to 1:5 and passaged every 3-4 days.
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