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8 protocols using il 36α

1

Renal Tissue Analysis Protocol

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Renal tissues were fixed in 10% buffered formalin, embedded in paraffin, and cut into 3-μm slices. Hematoxylin and eosin or Masson trichrome staining were used for histologic examination under light microscopy. Renal TILs were scored in 40 consecutive selected fields at a magnification of ×400, as described previously [5 (link)]. For IHC analysis, renal tissue sections were stained with antibodies against F4/80 (Bio-Rad, Hercules, CA, USA), CD3 (Dako, Glostrup, Denmark), collagen (Col)-I, Col-III (Southern Biotech, Birmingham, AL, USA), p-Smad2/3 (Santa Cruz, CA, USA) or IL-36α (R&D Systems, Minneapolis, MN, USA). Quantitative analysis was conducted at a magnification of ×400 in 40 selected consecutive fields from both cortical and outer medullary regions using PAX-it image analysis software (Pax-it; Paxcam, Villa Park, IL, USA), as described previously [5 (link)].
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2

Inflammatory Cytokine and Cigarette Smoke Exposure Protocol

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Recombinant IL-1α, IL-36α, IL-36β, IL-36γ, IL-36Ra, TNF-α, neutrophil elastase, cathepsin G, proteinase-3, and anti–IL-36γ antibody (catalog AF2320) were purchased from R&D Systems. Rabbit anti–goat Ig/HRP (P0449) was purchased from Agilent. Poly(I:C) was purchased from Sigma-Aldrich. Nontypeable H. influenzae were obtained from the National Collection of Type Cultures (strain no. 1269) and were heat-killed by incubation at 65°C for 10 minutes as described previously (55 (link)). CSE was generated as previously described (56 (link)) from full-strength Marlboro cigarette (Phillip Morris). Budesonide was purchased from Thermo Fisher Scientific.
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3

Comprehensive Immunohistochemical Analysis

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Air-dried cryosections were paraformaldehyde fixed and stained with H&E and the following primary antibodies (dilution 1:100): GluCer (Glycobiotech, catalog RAS_0011), Involucrin (Abcam, catalog ab98), NOS2 (R&D Systems, catalog MAB9502-SP), ABCA12 (Abcam, catalog ab98976), p-STAT1 (Cell Signaling Technology, catalog CST-9167), STAT1 (Cell Signaling Technology, catalog CST-9172), IL-37 (BioTechne, catalog NBP2-33712), IL-36α (R&D Systems, catalog AF1078), and IL-36γ (Thermo Fisher Scientific, catalog MA526240). Quantification was performed using CellProfiler software.
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4

DC-T Cell Interaction in Staphylococcal Infection

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Spleens from naïve wt and IL-36R−/− mice were obtained. After manually pushing them through a cell separation filter (40 μm), CD11c+ dendritic cells (DCs) were isolated using CD11c MicroBeads (Miltenyi Biotec). In 96 well plates, 2×104 DCs were stimulated with heat-killed S. aureus (log-phase bacteria incubated at 70°C for 1 h) (MOI 10) at 37°C for 16 h. CD3+ T cells were isolated from naïve and IL-36R−/− draining lymph nodes using Pan T cell isolation kit (Miltenyi Biotec). Heat-killed S. aureus were washed off, and DCs were further co-cultured for 72 h with purified CD3+ T cells (1×105) in complete RPMI 1640 containing extra L-Glutamine and 2-mercaptoethanol ± the exogenous recombinant murine IL-36α 1 μg/mL (R&D systems). During the last 4 h of co-culture, cells were restimulated with PMA (20 ng/mL), ionomycin (1 μg/mL) and GolgiStop (BD Biosciences), and intracellular cytokines were analyzed by flow cytometry.
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5

Protein Extraction and Analysis from Renal Tissues

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Protein extraction from renal tissues and cultured cells was conducted. Each target protein was analyzed by SDS-PAGE and immunoblotting using respective antibodies against NLRP3, caspase-1 (Adipogen, San Diego, CA, USA), IL-1β, IL-36α (R&D Systems), p-STAT3, p-JNK, p-ERK, p-p38 (Cell Signaling, Danvers, MA, USA) or b-actin (Santa Cruz), as described previously [5 (link)].
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6

Immunohistochemical Analysis of Inflammatory Markers

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Using formalin-fixed, paraffin-embedded specimens, hematoxylin and eosin and immunohistochemical staining were performed using antibodies against IL-36α(R&D Systems, Minneapolis, MN, USA), IL-36Ra (R&D Systems), nuclear factor kappa-light-chain-enhancer of activated B cells p65 (NF-κB; Abcam, Cambridge, UK), IL-23 (Biolegend, San Diego, CA, USA), IL-17 (Abcam), and IL-8 (Abcam). The immunohistochemical results were analyzed individually in the epidermis and dermis using Image Pro Plus Version 4.5 (Media Cybernetics Co., Silver Spring, MD, USA). The expressions of each immunohistochemical staining were determined by ratio of the stained area to measured epidermal area and dermal area on the representative area of each specimen as a blinded state. Dermal area was defined as the area within 200 µm from epidermo-dermal junction and representative area was defined as the area represents average stained area in consideration of overall tendency at each specimen. To determine the expression of NF-κB positivity, the ratio of NF-κB-positive cell count to the overall cell count within the epidermis or dermis was determined. For the NF-κB staining, positive findings were defined as strong nuclear staining, easily observed at the scanning magnification. For each frame, the tracing was repeated 3 times and the mean was determined.
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7

Assaying IL-36 Receptor Antagonist Activity

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IL-36Ra proteins used in activity assays were generated by transfecting HEK293 cells with wild-type or mutant myc-IL36RN, using Lipofectamine 2000. After 24 hours, cells were harvested and recombinant proteins were isolated from lysates, using the c-Myc tagged protein mild purification kit (MBL International Corporation, Woburn, MA; catalogue n:3305).
HeLa-IL36R cells were first starved in supplement-free RPMI media for 4 hours and then treated with 300 ng purified IL-36Ra protein (wild-type or mutant, generated as described above). After 30 minutes, cultures were stimulated with 10 ng/ml IL36α (RD Systems, MN; catalogue n: 6995-IL). Culture supernatants were collected after 4 hours and analyzed by ELISA.
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8

Inflammatory Cytokines Quantification

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IL-36α, IL-38 (R&D Systems, St Louis, MO, USA) and IL-36RA (MyBioSource, San Diego, CA, USA) levels in plasma and IL-8 (Thermo Fisher Scientific, Waltham, MA, USA) and IL-6 (Biolegend, San Diego, CA, USA) concentration in cells supernatants were determined according to the manufacturer’s instructions.
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