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2 protocols using cd38 pe texas red

1

Comprehensive B Cell Immunophenotyping

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Isolated B cells were washed and stained with Live/Dead viability discrimination dye (Life Tech #L34968). Cells were subsequently blocked in 2% BSA supplemented with Fc Blocker (BioLegend) for 15 min and then stained with antibodies against B cell surface makers for 1 h [all antibodies were from BD Biosciences except CD38-PE/Texas Red (Life Technologies #MHCD3817); CD19-BV510, #562847; CD20-BUV396, #563782; CD27-BV421, #560448; IgD-APC, #348222; IgM-PerCP/Cy5.5, #314512; CD138-PE, #552026; IgG-PE/Cy7, #409316; CD45-APC/Cy7, #368516]. After staining, cells were washed two times in PBS without Mg++ or Ca2+ and then fixed in 2% PFA before analysis on a BD Fortessa or BD LSR flow cytometer. Plasmablasts were defined as CD19+CD20+IgDCD27+CD38+ B cells. B cell activation was determined with CD86 surface staining (#562432). Ig production was determined by intracellular staining with anti-IgA (Life Tech #Z25002), anti-IgE (Biolegend #325510), and anti-IgG antibodies in plasmablasts; AID was detected with antibody #Z25302 (Life Tech). For intracellular IRF5 staining, after overnight fixation, cells were permeabilized the following day in 0.1% Triton X-100 and rinsed in PBS 2× before blocking in 2% BSA solution. IRF5 staining was performed using anti-IRF5 antibody conjugated to Alexa Fluor 488 (Abcam Catalog#: AB193245).
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2

Comprehensive Immune Phenotyping of PBMCs

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PBMC were thawed and stained with the LIVE/DEAD Aqua (Life Technologies, Grand Island, NY) viability dye according to the manufacturer protocol. Before fixation, cells were incubated with Human Fc Receptor Binding Inhibitor (eBioscience, San Diego, CA) then stained with the following monoclonal antibodies: CD38-PE-TexasRed (Life Technologies), IgD-FITC (BD Biosciences, San Jose, CA), IgM-Brilliant Violet 421, CD307d (FcRL4)-PE, CD3-Alexa Fluor 700, CD10-PE/Cy7, Streptavidin-APC/Cy7, CD19-PerCP/C5.5 (BioLegend, San Diego, CA), CD24-Biotin, CD21-APC, and CD27-650NC (eBioscience). Cells were then fixed in 2% formaldehyde and analyzed within 1-2 hours on an LSR Fortessa (BD Biosciences). An average of 8×105 events were collected (range of 2×105 to 2×106 events), which resulted in an average of 6.7×104 total B cells analyzed (range of 5×103 to 2×105 B cells). All flow cytometry data was processed using FlowJo Software (Tree Star Inc., San Carlos, CA). Percentages presented for total CD19+ B cell population (CD19+, CD3−) are derived from the percentage of cells within the live gate based on LIVE/DEAD Aqua staining that is within the lymphocyte gate. All B cell subset percentages are the frequency of the total B cell gate (CD19+, CD3−) described above, with the exception of the IgM+ memory B cell subset, which is presented as frequency of CD19+, CD3−, CD10−, CD27+, and IgD−.
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