The quantitative measurement of gene expression was performed using the cDNA samples with an
AB7500 Real-time PCR System and the
SYBR Green fluorescence dye (Takara) (Li et al., 2012 (
link)).
The genes analyzed were the following: Fe deficiency-induced transcription factor
MxFIT1 (NCBI: XP_008360009.1), Fe
2+ transporter
MxIRT1 (NCBI: AAO17059.1),
Malus ×
domestica zinc finger protein
MxZAT12c (NCBI: XM_008371622), putative E3 ligase BRUTUS
MxBTSa (NCBI: XP_008393323.1). The sequences of all of the genes in the apple genome were obtained from the website
http://genomics.research.iasma.it/ via its BLAST (basic local alignment search tool) service. Based on the BLASTP results in NCBI
4 for those proteins encoded by the genes examined, primers were designed using Primer Premier 5 (Primer, Co., Canada). The β
-Actin was used as the reference gene. The primer sets used are listed in Supplementary Table S1.
Sun C., Wu T., Zhai L., Li D., Zhang X., Xu X., Ma H., Wang Y, & Han Z. (2016). Reactive Oxygen Species Function to Mediate the Fe Deficiency Response in an Fe-Efficient Apple Genotype: An Early Response Mechanism for Enhancing Reactive Oxygen Production. Frontiers in Plant Science, 7, 1726.