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6 protocols using rosettesep nk cell enrichment cocktail

1

Isolation and Characterization of Primary Human NK Cells

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Buffy coats were obtained from healthy human donors from the blood bank at Oslo University Hospital according to the Declaration of Helsinki. The study was approved by the South-Eastern Norway Regional Ethical Committee (REK2012-1452). Primary NK cells were enriched through density gradient separation using RosetteSep NK cell Enrichment Cocktail according to the manufacturer’s protocol (StemCell Technologies), followed by B-cell depletion using anti-CD19 Dynabeads (ThermoFisher Scientific). The resulting NK cell population was > 90% CD56+ and CD3. The following tumor cell lines obtained from ATCC were used: NK-92 (NK cell line), HCT116 (colorectal carcinoma), HCT-15 (Dukes type C colorectal adenocarcinoma), DU145 (prostate carcinoma), PC3 (prostate adenocarcinoma), SK-BR-3 (breast adenocarcinoma), T-4D7 (mammary gland ductal carcinoma), OVCAR-3 (ovarian adenocarcinoma), WM9 (metastatic melanoma), and U87 (glioblastoma). The NK cell line KHYG-1 was obtained from the German Collection of Microorganisms and Cell Cultures (DSMZ). All cell lines were cultured in complete RPMI-1640 medium (cRPMI), supplemented with 10% FBS, 1% penicillin/streptomycin, 1% sodium pyruvate, and 50 mM 2-mercaptoethanol (NK-92 in cRPMI with 20% FBS). NK-92 and KHYG-1 cell cultures were supplemented with 500 IU/ml human recombinant IL-2.
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2

Isolation and Culture of Primary NK Cells

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Buffy coats from healthy human donors were obtained from the blood bank at Oslo University Hospital according to the Declaration of Helsinki. The study was approved by the South-Eastern Norway Regional Ethical Committee (REK2012-1452). Primary NK cells were enriched using RosetteSep NK cell Enrichment Cocktail according to manufacturer’s protocol (Stemcell Technologies), and B cells were depleted by using anti-CD19 Dynabeads (ThermoFisher Scientific). Final NK cell purity was >90% CD56+ and CD3-. The NK-92 cell line was obtained from ATCC (CRL-2407), and was cultured in complete RPMI medium (RPMI-1640 containing 20% FBS, 1% penicillin/streptomycin, 1% sodium pyruvate, and 50 mM 2-mercaptoethanol) supplemented with 500 IU/ml human recombinant IL-2 (R&D Systems). The HCT-116 colorectal carcinoma cell line was cultured in cPRMI with 10% FBS, and split every 2-3 days.
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3

Isolation and Culture of Human NK Cells

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For allogeneic assays, human NK cells were enriched from the peripheral blood of healthy donors (American Red Cross) with the RosetteSep NK-cell Enrichment Cocktail (StemCell Technologies, #15065 BC, Canada) and Ficoll-Paque Plus (Amersham, #17-1440-03) centrifugation. Isolated cells (1 × 106 cells/mL) were incubated in complete RPMI 1640 media at 37°C.
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4

Isolation and Culturing of NK Cells

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Our research was approved by the Institutional Review Board for human studies at Stanford University. Leukoreduction system (LRS) chambers were obtained from the Stanford Blood Center. NK cells were enriched using the RosetteSep™ NK Cell Enrichment Cocktail (STEMCELL Technologies) followed by centrifugation on Ficoll-Paque™ Premium (GE Healthcare). Then, CD56bright and CD56dim NK cells were sorted using the gating strategy showed on Supplemental Figure 1. NK cells were cultured on RPMI 1640 containing 10% FBS (Corning), 100U/mL Penicillin-Streptomycin, 55µM 2-Mercaptoethanol, 1x MEM Non-Essential Amino-Acids, 1mM Sodium Pyruvate, 10mM HEPES (Gibco). In order to stimulate AhR, before the culture, IL-2 100U/mL (NCI BRB Preclinical Repository) or IL-15 10ng/mL (Biolegend), and FICZ 200nM (Enzo Life Science) or CH-223191 3μM (Sigma-Aldrich) or DMSO (ATCC) as control were added to the media, as indicated.
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5

Isolation and Expansion of NK Cells

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NK cells were derived from healthy donors. Approval was obtained from the ethical committee of IRCCS Ospedale Policlinico San Martino (39/2012) of Genova (Italy), and informed consent was provided according to the Declaration of Helsinki. NK cells were purified from peripheral blood using the RosetteSep™ NK Cell Enrichment Cocktail (StemCell Technologies, 15025). Those populations displaying more than 95% of CD56+CD3CD14 NK cells were selected. Polyclonal NK cell lines were obtained by culturing purified NK cells at appropriate dilutions on irradiated feeder cells in the presence of 100 U/mL rhIL-2 (Proleukin, Novartis) and 1,5 ng/mL phytohemagglutinin (PHA, Gibco Ltd, 10576-015) in round-bottomed 96-well microtiter plates. After 3/4 weeks of culture the expanded NK cells were used for NK cell stimulation experiments.
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6

NK Cell Degranulation Assay

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NK cell degranulation assays were performed with freshly isolated and purified NK cells from six healthy individuals of which two were KIR2DL2+/C1+, three were KIR2DL2-3+/C1+ and one was KIR2DL2-3+/C1-2+. Primary NK cells were isolated by incubating whole blood with RosetteSep™ NK cell enrichment cocktail (Stem Cell) and performing a Histopaque®-1077 (Sigma) density gradient centrifugation. NK cells were subsequently incubated overnight in RPMI medium 1640 (Sigma-Aldrich) supplemented with 10% heat-inactivated fetal calf serum (FCS, Sigma-Aldrich), 2500 U/mL penicillin, 2500 ug/mL streptomycin, 100mM L-Glutamine (Cellgro), and 1.0 ng/mL IL-15 (Cellgro). Next, NK cells (1×105) were co-incubated with peptide-pulsed 221-ICP47-C*03:04 cells (5×105) at an effector-target-ratio of 1:5 in RPMI containing anti-human CD107a-PE-Cy7 (12.5 μL/mL). Cells were incubated for 30 minutes at 26°C in 5% CO2, after which monensin (1.5 μL/mL, BD GolgiStop™) was added, followed by an additional 5 hours of incubation at 26°C in 5% CO2. Cells were stained with anti-CD3-PB, anti-CD16-BV785, anti-CD56-BV605, anti-CD14/19-BV510, anti-KIR2DL2/3-PE, and anti-KIR2DL3-APC, washed, fixed with 4% paraformaldehyde, and analyzed by flow cytometry.
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