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Atto488

Manufactured by Proteintech

ATTO488 is a fluorescent dye that emits light in the green region of the visible spectrum. It is commonly used as a labeling agent for biomolecules and imaging applications.

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3 protocols using atto488

1

Immunostaining Embryonic Tissue Samples

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Embryos were fixed, stained, and mounted as previously described 42. Antibodies against the following antigens were used: Dlg (mouse, 0.4 μg/ml) 43, Arm (mouse M7A1, 0.4 μg/ml) 44, and Slam (rabbit, 1:5,000) 45. Secondary antibodies were labeled with Alexa dyes (Invitrogen, 0.4 μg/ml). GFP booster labeled with ATTO488 (ChromoTek, 1:500) was used for E‐Cad‐GFP.
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2

Nucleolin and B23 Quantification Protocol

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Nucleolin was detected with a rabbit polyclonal antibody raised against purified human nucleolin (pab0971-P Covalabs / dil. WB 1/1000) as previously described [15 (link), 19 (link)]. B23 was detected with a mouse monoclonal antibody (FC82291 Sigma-Aldrich #B0556 / dil. WB 1/1000). α-tubulin was detected with a mouse monoclonal antibody (DM1A Sigma-Aldrich #T9026 / dil. WB 1/1000). β-actin was detected with a mouse monoclonal antibody (AC-15 Sigma-Aldrich #A5441 / dil. WB 1/1000). Acetylated tubulin was detected with a mouse monoclonal antibody (611B1 Sigma-Aldrich #T7451 / dil. IF 1/300). GFP detection was boosted with an anti GFP antibody directly coupled to Atto488 (Chromotek / dil. IF 1/200). For Immunofluorescence, secondary antibodies were coupled to Alexa555 (Molecular Probes DaMAlexa555 #A31570 / dil. 1/2000). For WB, secondary antibodies were coupled to IRdye800 (Li-Cor #92632211 / dil. 1/2500) or Alexa680 (Li-Cor #92632220 / dil. 1/15000). EB3-tagRFP plasmid has been previously described [15 (link)].
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3

Multicolor Labeling of Synaptic Proteins

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Plasmids were kindly provided by our collaborators: pCMV–GFP–GPI and pCMV–HA-Nlg1 (Olivier Thoumine, Bordeaux/Peter Scheiffele, Basel), pCMV–Homer–GFP (Daniel Choquet, Bordeaux), pSyn5-HA-neurexin1ß (Markus Missler, Münster).
Primary antibodies used were the following: anti-GFP mouse IgG, monoclonal antibody (200 μg; clones 7.1 and 13.1; Catalogue number 11814460001; Roche Diagnostics) and anti-HA high affinity, rat monoclonal antibody (clone 3F10; 50 μg; Catalogue number 11867423001; Roche Diagnostics), anti-GFP nanobodies ATTO488 (Chromotek).
Secondary antibodies used were the following: Qdot655 goat F(ab′)2 anti-mouse IgG conjugate (H+L) (1 μM solution Q11022MP Lot729518; Invitrogen/Molecular Probes). For dual colour imaging the following were used: Qdot605 goat F(ab')2 anti-mouse IgG conjugate (H+L) (1 μM solution, Q11002MP; Invitrogen/Molecular Probes) plus Qdot655 goat F(ab')2 anti-rat IgG conjugate (H+L)(1 μM solution, Q11621MP; Invitrogen/Molecular Probes).
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