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36 protocols using ecl substrate

1

Western Blot Analysis of Protein Expression

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VICs were washed two times in PBS, solubilised and homogenised in RIPA buffer solution (Sigma) supplemented with protease inhibitor cocktail 1X (Roche). Cells were scraped with a rubber policeman; the lysate was transferred into a 1.5ml microtube and vortexed. Proteins were quantified with a Pierce BCA protein assay (Thermo Scientific) after a 10,000g centrifugation for 10 minutes at 4°C. Total protein homogenates (7.5 μg) were denatured and separated on 10% Bis-Tris gels (Invitrogen). Electrophoretically resolved bands were then transferred on nitrocellulose membranes (Hybond C, Amersham). Membranes were blocked for 1 hour in Phosphate-Buffered Saline (PBS) containing 0.1% Tween-20 (PBS-T) and 5% (w/v) non-fat powdered milk. Then, they were incubated for 1 hour with primary antibodies (Table 1) in PBS-T containing 5% (w/v) non-fat powdered milk. Membranes were then washed three times in PBS-T and incubated with corresponding horseradish peroxidase conjugate secondary antibody (Table 1) for 1 h at room temperature in PBS-T. Membranes were washed five times in PBS-T. Visualization of the protein bands was accomplished using enhanced chemiluminescence (ECL) substrate (Amersham) and positivity was captured on Hyperfilm (Amersham). Films were scanned and bands were quantitated using the QuantityOne program (Biorad). Levels of expression were normalised to GAPDH.
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2

Western Blot Analysis of PCV2 Antibodies

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The cellular proteins from cell suspension were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE, 12% acrylamide). After electrophoresis, proteins were transferred onto PVDF membranes (Millipore). The PVDF membrane was soaked in 5% milk before incubation with swine anti-PCV2 serum (1:100) overnight at 4 °C. Detection was achieved with a peroxidase-conjugated goat anti-swine Ab (KPL), followed by the addition of an ECL substrate (Amersham) and Chemiluminescence imaging was taken by ChemiDoc Touch (Bio-Rad, USA).
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3

Western Blot Analysis of Parasitic Proteins

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Ten μg each of ES-P and F3 fraction (Fig 3) or 10 μg ES-P and total extract from T. spiralis, TS 15-1c (Fig 5B) or 10 μg of purified TS 15-1c antibody (Fig 5C) or 15 μg of each ear tissue samples (Fig 7) were separated on 10% acrylamide SDS-PAGE gel at 100 V for 90 min. Sweden), The loaded proteins were transferred onto a nitrocellulose membrane (Amersham Biosciences, Little Chalfont, UK) and blocked with 5% skim milk in TBST at 4°C overnight. Then, the membrane was incubated with primary antibody (polyclonal α-F3, α-TS 15-1c (1:500); time-course sera (1:1,000), α-TGF-β1 (1:1000; abcam, Carlsbad, CA, USA),;p-Smad2/3 (1:1000; Thermofisher science, Waltham, MC, USA),;α-mouse type I collagen (1:1000; abcam), and actin (1:5000, abcam)) in 5% skim milk in TBST for 2 hrs at room temperature. The secondary antibody, α-mouse or α-rat IgG-HRP conjugate (Sigma, Seoul, Korea) was used at 1:5,000 dilution for 1 hr at room temperature. HRP was detected using an ECL substrate (Amersham Biosciences, Uppsala, Sweden), analyzed using the LAS 3000 machine. (Areas of the detected bands were determined and compared by Image J software).
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4

Profiling STAT3 phosphorylation in B cells

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B cells were negatively purified from WT mice and cultured under IL-35 producing B cells’ culture system. Then B cells were lysed and protein from 1 × 107 cells was resolved by SDS-PAGE and transferred to polyvinylidene fluoride (PVDF) membranes (Merck Millipore, Billerica, MA, USA), and blotted with anti-STAT3 (1:5000, Abcam) and anti-p-STAT3 (1:5000, Abcam). Bound antibodies were revealed with HRP-conjugated species-specific secondary antibodies using ECL substrate (Amersham Pharmacia Biotech, Station, NY, USA).
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5

SARS-CoV-2 RT-PCR and Western Blot Analysis

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Reverse transcription-PCR (RT-PCR) was performed using the PrimeScript RT Reagent Kit (TaKaRa). Quantification of mRNA level was performed in a 20 μl mixture consisting of 10 μl Q5 High-Fidelity 2X Master Mix (NEB), 0.2 μl RT-PCR product, 1 μl primer set mix at a concentration of 5 pmol/ml for each primer and 8.8 μl sterile water. The forward primer of SARS-CoV-2 5′ UTR is 5’ ATTAAAGGTTTATACCTTCCCAG 3’, and the reverse primer is 5’ CTTACCTTTCGGTCACAC 3’. Cells were collected and lysed in RIPA lysis buffer (Thermo Scientific) with complete protease inhibitor cocktail (Roche Applied Science). The protein levels were determined using Western blot analysis. Equal portions of the cell lysate were run on a 15% SDS-PAGE gel and blotted onto a PVDF membrane, which was subsequently probed with HRP Anti-Strep tag antibody (Abcam) and developed with an ECL substrate (Amersham Biosciences).
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6

Phosphorylation Analysis of Hippocampal Proteins

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Hippocampal tissues were homogenized for Western blot analysis. Phosphorylation of NMDA receptors (type 1) (Ser 897), ERK1/2 (Thr 202/Tyr 204), CREB (Ser 133), and β-actin was performed as previously described [14 (link), 15 (link)]. Antibody binding was detected via incubation with ECL substrate (Amersham Pharmacia Biotech, Piscataway, NJ, USA) and visualized using radiographic film.
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7

EGF-induced MAPK Pathway Activation

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SKOV3 and A549 cells were serum starved overnight and the cells were then treated with 100 ng/ml epidermal growth factor (EGF) for 20 mins following treatment with LLS2 (25 μM) for 2 hours. Cells were lysed in a RIPA lysis buffer (50 mM Tris-HCl pH 7.5, 0.5% sodium deoxycholate, 1% NP-40, 0.1% SDS, 150mM NaCl, 2mM EDTA, 50mM NaF, 1 mM DTT, 2 mg/mL aprotinin, and 2 mg/mL leupeptin) and incubated on ice for 20 min. After centrifugation at 12,000Xg for 20 min at 4°C, total cell lysates were collected. 20 μg of each lysate was boiled in 2X Laemmli SDS-PAGE sample buffer (126 mM Tris/HCl, 20% glycerol, 4% SDS, 0.02% Bromphenolblue) at 95°C for 10 mins followed by separation on 12% SDS-PAGE gels and transferred onto PVDF membrane (Bio-Rad). After blocking with 10% non-fat dried milk for 1 h, the membrane was incubated with the specific primary antibodies against phospho MEK, MEK, phosphor Erk, Erk, beta-actin (Cell Signaling) at 4°C overnight followed by incubation with corresponding secondary antibodies at 37°C for 1 hour. After addition of ECL substrate (Amersham), chemiluminescence signal was detected by CCD camera (Biorad).
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8

Western Blot Analysis of DDR2 and FAK

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Total cell lysates were collected in Tris-Glycine SDS sample buffer (Invitrogen, LC2676) and fractioned using Tris-Glycine polyacrylamide gels (Invitrogen, XP04125). The following primary antibodies were used at a 1:1000 dillution: phosphorylated DDR2 at Y740 (B&D system, MAB25382), total DDR2 (LifespanBio, LS-B15752), phospho-FAK at Y397 (Cell Signaling, 3283) and total FAK (Cell Signaling 3285), were used at 1:1,000 dilution. Secondary antibody (horseradish peroxidase–conjugated goat anti-rabbit IgG) was used at 1:10,000 dilution and blots were visualized using ECL substrate (Amersham). Chemiluminescence signals were detected using a ChemiDoc Imaging system (Bio-Rad, ChemiDoc MP) and analyzed using Bio-Rad software Image Lab 6.0.1.
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9

Western Blot Analysis of Rotavirus Strains

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Proteins were separated by SDS-PAGE in an 8%–20% gradient gel and transferred onto a Hybond-P polyvinylidene fluoride membrane (Amersham) using a Pierce Power Blotter electric transfer system (Thermo Scientific). The membranes were next treated with commercial polyclonal antisera to five RVA strains: Wa-G1P[8], Ds-1 G2P[4], Ito-G3P[8], Hochi-G4P[8], 69M-G8P[10] (Cat#MBS316568; MyBioSource Inc., San Diego, CA, USA), at a 1:500 dilution and then with secondary anti-species antibodies conjugated with horseradish peroxidase (Cat#713-035-003; Jackson ImmunoResearch Laboratories Inc., West Grove, PA, USA) in a 1:10,000 dilution. The membranes were next treated with ECL substrate (Amersham), and the chemiluminescence signals were registered using the ChemiDoc XRS+ system (Bio-Rad Laboratories).
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10

Western Blot Analysis of Phage Proteins

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Approximately 1 × 1012 phage particles were boiled in SDS-PAGE sample buffer for 3 min, separated by SDS-PAGE, and electrophoretically transferred onto a nitrocellulose membrane. The membrane was blocked overnight in 10% skim milk diluted in PBS/Tween 20 and probed with anti-DBPII MAbs. The membrane was then washed with PBS/Tween 20 before incubating with an HRP-conjugated anti-mouse secondary antibody. The bound antibody was detected by enhanced chemiluminescence (ECL) substrate (Amersham).
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