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Alexa flour secondary antibody

Manufactured by Thermo Fisher Scientific
Sourced in United States

Alexa Fluor secondary antibodies are a range of fluorescently-labeled secondary antibodies manufactured by Thermo Fisher Scientific. These antibodies are designed to detect and visualize primary antibodies in various immunodetection techniques, such as immunofluorescence microscopy and flow cytometry. The Alexa Fluor dyes provide bright, photostable fluorescence signals to enable sensitive and reliable detection of target proteins.

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15 protocols using alexa flour secondary antibody

1

Intestinal Barrier Integrity Assessment

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Intestinal alkaline phosphatase, LPS (E coli serotype 055:B5), and Ripa buffer were purchased from Sigma-Aldrich, and TRIzol was purchased from Invitrogen. The iScriptReverse Transcription Supermix for RT-qPCR and iQ SYBR Green Supermix Kit were obtained from BIO-RAD, and the Coomassie (Bradford) Blue Protein Assay Kit was from Fisher Scientific. Goat anti-human ZO-1 and rabbit anti-human Occludin were purchased from Santa Cruz Biotechnology, and Alexa Flour secondary antibodies were obtained from Lifetechnology.
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2

Immunostaining of Formalin-Fixed Samples

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Immunostaining was performed on formalin-fixed paraffin embedded sections as previously described [6 (link)]. IF utilized Alexa-Flour secondary antibodies (Life Technologies) with DAPI (100 ng/ml) for DNA counterstaining. IHC was completed with EnVision HRP antibody system (Dako, Carpinteria, CA). Antibodies: anti-FLAG pAb, 1:1000 (Sigma); anti-loricrin mAb, 1:1000 (Covance); anti-β-gal pAb 1:5000 (MP Biomedicals, Santa Ana, CA); 5E1 anti-Shh mAb 1:50 (DSHB, Iowa City, IA); anti-Phospho-Erk1/2 1:400 (Cell Signaling, Danvers, MA).
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3

Immunocytochemistry of Oligodendrocyte Markers

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After siRNA treatment, cells were blocked with 5% normal donkey serum (NDS) (Sigma‐Aldrich) supplemented with 0.1% Triton X‐100 (Sigma‐Aldrich) in PBS for 1 hr at RT. Then cells were incubated for 1 hr at RT with primary antibodies (Mouse anti‐CNPase antibody, 1:500 (C5922, Sigma‐Aldrich); Rabbit anti‐Olig2 antibody, 1:500 (AB9610, Millipore); or rat anti‐MBP antibody, 1:500 (MCA4095, Serotec)) in 5% NDS with 0.1% Triton X‐100. After three washes, the cells were incubated with the appropriate Alexa Flour secondary antibodies (1:500, Life‐technologies) diluted in 5% NDS with 0.1% Triton X‐100 for 1 hr at RT. Nuclei were stained with Hoechst (2μg/ml, Sigma‐Aldrich) for 10 min at RT, before the coverslips were mounted using Fluoromount G (Southern Biotech).
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4

Immunofluorescent Staining of Tissues and Cells

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For tissue immunofluorescent staining, sections were blocked with 10% goat serum followed by incubation with primary antibodies against Akt1 (1:100, rabbit anti-mouse, Cell Signaling, Danvers, MA) and CD31 (1:100, mouse anti-mouse, Abcam, Cambridge, MA) at 4 °C overnight. Immunofluorescent staining of HMEC monolayers was performed using the chamber slides. Cells were then washed twice with PBS, fixed using 2% paraformaldehyde for 30 min, permeabilized with 0.1% Triton X-100 for 15 min, and blocked with 2% BSA in sterile PBS. Cell monolayers were then incubated with antibodies against Claudin-5 (1:100, Rabbit antibody, Cell Signaling, Danvers, MA) at 4 °C overnight. Immunofluorescence was revealed using AlexaFlour secondary antibodies (1:2000 dilution of goat anti rabbit 488 and goat anti-mouse 594) obtained from Life Technologies, Grand Island, NY. Tissue sections or cells were mounted on to a glass slide using DAPI containing mounting medium (Vector Laboratories). Samples were observed under a confocal microscope equipped with argon and helium/neon lasers (LSM510, Zeiss, Germany). Controls were performed by omitting either one or both primary antibodies. All controls gave negative results with no detectable non-specific labeling.
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5

Immunoblotting Analysis of Insulin Signaling Proteins

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Samples were run on 4–20% precast SDS–PAGE gels (Novex, Life Technologies) and transferred to nitrocellulose membrane. Antibodies to HA and Myc (monoclonal mouse and polyclonal rabbit) and human Rlf were purchased from Santa Cruz Biotechnology. Mouse-FLAG antibodies were from Agilent Technologies. Anti-RFP antibodies were from Abcam (Cambridge, MA). AS160 and pAS160 (T642) antibodies were from EMD Millipore. Rabbit anti-Rlf serum described previously (Wolthuis et al., 1997 (link)) was affinity purified (Pacific Immunologies, Ramona, CA) and used for immunoblotting. RalA and caveolin3 antibodies were from BD Biosciences (San Jose, CA). Transferrin receptor antibody was from Zymed Labs. Glut4 and Sec8 antibodies were purchased from Alpha Diagnostics (San Antonio, TX) and Enzo LifeSciences (Farmingdale, NY). Rab10, Akt, pAkt (S473), pAkt-substrate, histone H3, and IRAP antibodies were from Cell Signaling (Danvers, MA). Horseradish peroxidase–conjugated secondary antibodies were obtained from Thermo Scientific (Waltham, MA), and Alexa Flour secondary antibodies were from Molecular Probes, Life Technologies. Insulin, GDP, GTPγS, and Optiprep gradient solution were purchased from Sigma-Aldrich (St. Louis, MO).
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6

Multicolor Immunofluorescence Labeling

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Alexa Flour 488–labeled donkey anti-goat, Alexa Flour 594–labeled donkey anti-mouse, Alexa Flour 647–labeled donkey anti-rabbit, IRDye 800CW donkey anti-goat, and IRDye 680LT goat anti-rabbit were used. Alexa Flour secondary antibodies were purchased from Invitrogen Molecular Probes, and IRDye conjugate secondary antibodies were from LI-COR Biosciences.
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7

Immunofluorescence Staining of Brain Tissue

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Immunofluorescence staining was performed according to described previously (Li et al., 2022 (link)). Briefly, mice were perfusion-fixed with 4% paraformaldehyde and soaked in PFA for 48 h, then brian was replaced with sucrose, and 30um brain tissue sections were prepared. Sections were washed with PBS for 15 min (5 min × 3). After washing, the sections were blocked with blocking buffer (10% normal goat serum in 0.3% Triton X-100 in PBS) for 1 h at room temperature and then incubated with primary antibodies overnight at 4°C, Rabbit anti-Iba1 (1: 1000, Wako,#019–19,741); Mouse anti-GFAP (1,1,000, Sigma-Aldrich, #MAB360). The next day, sections were incubated with secondary antibodies (Alexa Flour secondary antibodies, Thermo Fisher) at room temperature for 1 h; the hoechst was applied in the last 10 min. The sections were washed with PBS for 15 min (5 min × 3). After washing, sections were transferred onto glass slides, and glass coverslips were mounted using a mounting medium. Images were captured using a confocal microscope and were analyzed by ImageJ software.
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8

Brain Tissue Immunofluorescence Staining

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Immunofluorescence staining was performed according to previously reported protocols [56 (link)]. Briefly, brain tissue sections (20-μm thick) were washed with PBS for 15 min (5 min × 3). After washing, the sections were treated with blocking buffer (10% goat serum in 0.3% Triton X-100 in PBS) for 1 h at room temperature. After blocking, the tissue was treated with primary antibodies (Iba1, GFAP) for overnight at 4̊ °C. The next day, secondary antibodies (Alexa Flour secondary antibodies, ThermoFisher) were applied at room temperature for 1 h. The sections were washed with PBS for 5 min three times. After washing, the sections were transferred to slides, and glass coverslips were mounted using the mounting medium. The images were taken under inverted fluorescence microscope I X73 Olympus.
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9

Immunofluorescence Staining of Cell Lines

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Cell lines were grown at 1 × 104 cells/cm2 on PDL‐coated glass coverslips for 48 h, fixed with 4% paraformaldehyde, and exposed to primary antibodies O/N at 4°C and to secondary antibodies for 2 h at RT. The following antibodies were used: PECAM (polyclonal rabbit, 1:20, Abcam), PAI‐1 (polyclonal rabbit, 1:50, Sigma Prestige), SNAI1/2 (polyclonal rabbit, 1:500, Abcam), S100A4 (monoclonal mouse, 1:80, Sigma), αSMA (monoclonal rabbit, 1:500, Abcam; monoclonal mouse, 1:100, Sigma), and AlexaFlour secondary antibodies (1:1500, ThermoFisher Scientific). Hoechst 33342 was used to label cell nuclei. Slides were imaged using a Zeiss Axio Imager M2 microscope.
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10

Immunofluorescence Staining of Brain Tissue

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Immunofluorescence staining was performed according to previously reported protocols (Shah et al., 2017 (link)). Briefly, brain tissue sections (20 μm thick) were washed with PBS for 15 min (5 min × 3). After washing, the sections were treated with blocking buffer (10% Goat serum in 0.3% Triton X–100 in PBS) for 1 h at room temperature. After blocking the tissue was treated with primary antibodies with a dilution ratio of 1:500 μL (Iba1, GFAP) for overnight at 4°C. Next day secondary antibodies 1:400 μL (Alexa Flour secondary antibodies, ThermoFisher, Waltham, MA, United States) were applied at room temperature for 1 h. The sections were washed with PBS for 5 min three times. After washing, sections were transferred to slides, and glass coverslips were mounted using the mounting medium. The images were taken under inverted fluorescence microscope IX73 Olympus. ImageJ software was used to quantify the relatively integrated density of GFAP and Iba-1.
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