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2 protocols using trizol reagent 15596018

1

Immune Cell Activation Assay

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Ultrapure LPS, flagellin, nigericin, CpG oligonucleotide, and poly(dA:dT) were purchased from InvivoGen. Silica (MIN-U-SIL 15) was obtained from US Silica. ATP was from Sigma-Aldrich. Pam3Cys was from EMC Microcollections. X-tremeGENE HP DNA transfection reagent was from Roche. Transfection reagent Profect P1 was from Targeting Systems. Acridine Orange (L13159) was from Alfa Aesar. TRIzol reagent (15596018), BAPTA-AM (B1205), and Alexa Fluor 594-labeled zymosan particles (Z23374) were from Thermo Fisher Scientific. Antibodies for immunoblotting include anti-CHMP4B (13683-1-AP) from Proteintech; anti-IKKα (05-536) from Millipore; anti-Mcu (14997), anti-phospho-IkBα (S32), anti-phospho-IKKα/β (S176/180), anti-phospho-p65(S536), anti-p65, anti-phospho-ERK1/2 (T202/Y204), anti-phospho-JNK (T183/Y185), and anti-phospho-p38 (T180/Y182) from Cell Signaling Technology; anti-β-actin (sc-1615) from Santa Cruz Biotechnology; anti-NLRP3 (Cryo-2), anti-Asc (AL177), and anti-caspase-1 (AG-20B-0042) from Adipogen; and anti-IL-1β (AF-401-NA) from R&D Systems. Antibodies for the flow cytometry assay include anti-CD45-PE Cy7 (103114), anti-CD11b-FITC (101206), anti-Ly-6G-PB (127612), and anti-Ly-6C-PE (128008) from BioLegend.
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2

Immune Response Evaluation Protocol

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A reverse transcription kit (TAKARA, DRR037A) and real-time master kit (DRR014A) were purchased from Takara Bio Inc. (Otsu, Japan); Trizol reagent (15596018) and DNaseI (AM2235) were from Thermo Fisher Scientific Inc. (Waltham, MA, USA). Antibodies against CD markers (CD3, CD4, CD14, CD19, CD16, CD56, CD20, CD123, HLA-DR, CD11c, and CD38) were purchased from the eBioscience company (San Diego, CA, USA). An IFN-α ELISA kit (3425-1H-6) was provided by the Mabtech company (Cincinnati, Ohio, USA), and recombinant human IFN-α and TNF-α were purchased from PeproTech Inc. (Westlake Village, CA, USA). CpG2216 oligonucleotides were synthesized by Thermo Fisher Scientific Inc. (Waltham, MA, USA). Ig subset antibodies for IgA1, IgA2, and IgG ELISA were purchased from Abcam Inc. (Cambridge, UK), LifeSpan BioSciences Inc. (Seattle, WA, USA), and DAKO Inc. (Santa Clara, CA, USA). Anti-IFN-α and anti-TLR9 antibody for immunofluorescence staining were purchased from Thermo Fisher Scientific Inc. (Waltham, MA, USA) and Santa Cruz Biotechnology Inc. (Santa Cruz, CA, USA), respectively.
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