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9 protocols using acetyl coa assay kit

1

Quantifying Metabolic States in E. coli

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E. coli cells were cultured in M9 medium until early mid-log phase (OD600, 0.8 to 1.0) and collected for the quantitative determination of intracellular ATP/ADP ratios and acetyl-CoA levels using the ATP assay kit (Solarbio, Beijing, China), ADP assay kit (Solarbio, Beijing, China), and acetyl-CoA assay kit (Solarbio, Beijing, China). Extraction and quantification for intracellular ATP/ADP ratios were carried out according to the ATP and ADP assay kit instructions, and the analysis of ATP/ADP ratios was performed with an Agilent 1260 series HPLC system. The analytical column was a Thermo 250-mm by 4.0-mm ODS-2HYPERSIL C18 column. The intracellular acetyl-CoA level was analyzed according to previous publications (52 (link), 53 (link)).
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2

Metabolic Profiling of Cells under Hypoxia

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Cells were seeded into six-well plates at a density of 1 × 106 cells in 2 ml RPMI 1640 medium per well and cultured overnight. Cells were then treated with or without 10 μM KU60019 and maintained at 1% O2 for 10–12 h. Glucose consumption, lactate production, ATP production, citrate production, succinate production, fumarate production, and PFKP and CS activity were detected using glucose assay kit (Solarbio® BC2500), LA assay kit (Solarbio® BC2230), ATP content assay kit (Solarbio® BC0300), citric acid (CA) content assay (Solarbio® BC2150), micro mitochondrial citric acid content assay kit (Solarbio® BC2175), succinate colorimetric assay kit (Sigma® MAK184), pyruvate (PA) assay kit (Solarbio® BC2200), acetyl-CoA assay kit (Solarbio® BC0980), fumarate assay kit (Sigma® MAK060), PFKP test kit (Nanjing Jiancheng Bioengineering Institute A129), and citroyl synthetase kit (Nanjing Jiancheng Bioengineering Institute A108) according to instruction of the manufacturers, respectively. All experiments were performed at least three times and the data were normalized by the cell numbers or protein content.
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3

Isolation and Quantification of Mitochondrial Acetyl-CoA

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A mitochondria isolation kit (ab110170, Abcam) was used in this experiment16 (link),17 (link). In brief, cultured NSCs were frozen and thawed to weaken the membranes and suspended in Reagent A. Then, the cells were homogenized and centrifuged at 1000× g at 4 °C for 10 min. The supernatant was collected (SN1), and the pellet was resuspended with Reagent B. After homogenization and centrifugation, the supernatant was collected again (SN2). SN1 and SN2 were mixed thoroughly and centrifuged at 12,000× g for 15 min at 4 °C. The pellet was collected in Reagent C supplemented with protease inhibitors and used for acetyl-CoA quantification.
Acetyl-CoA quantification was conducted using an acetyl-CoA assay kit (Solarbio life sciences, Beijing, China). Briefly, 5×106 cells or isolated mitochondria were collected and incubated in extraction buffer for 30 min. The cells were subjected to sonication and centrifuged at 8000× g at 4 °C for 10 min. The supernatants were collected and supplemented with acetyl-CoA assay buffer. The 340 nm absorbance values were measured at 20 s (A20s) and 80 s (A80s). The difference between A80S and A20S was used to calculate the relative level of acetyl-CoA.
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4

Metabolic Profiling of Cells under Hypoxia

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Cells were seeded into six-well plates at a density of 1 × 106 cells in 2 ml RPMI 1640 medium per well and cultured overnight. Cells were then treated with or without 10 μM KU60019 and maintained at 1% O2 for 10–12 h. Glucose consumption, lactate production, ATP production, citrate production, succinate production, fumarate production, and PFKP and CS activity were detected using glucose assay kit (Solarbio® BC2500), LA assay kit (Solarbio® BC2230), ATP content assay kit (Solarbio® BC0300), citric acid (CA) content assay (Solarbio® BC2150), micro mitochondrial citric acid content assay kit (Solarbio® BC2175), succinate colorimetric assay kit (Sigma® MAK184), pyruvate (PA) assay kit (Solarbio® BC2200), acetyl-CoA assay kit (Solarbio® BC0980), fumarate assay kit (Sigma® MAK060), PFKP test kit (Nanjing Jiancheng Bioengineering Institute A129), and citroyl synthetase kit (Nanjing Jiancheng Bioengineering Institute A108) according to instruction of the manufacturers, respectively. All experiments were performed at least three times and the data were normalized by the cell numbers or protein content.
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5

Acetyl-CoA Quantification in Fungal Fruiting Bodies

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Acetyl-CoA in fruiting bodies was extracted and measured using an acetyl-CoA assay kit (Solarbio, China). Briefly, fruiting body samples (100 mg) were ground in a mortar in an ice bath according to the manufacturer’s protocol, and then centrifuged at 8000× g for 10 min. Acetyl-CoA content was then measured at 340 nm, using a spectrophotometer as described by the protocol.
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6

Intracellular Acetyl-CoA Quantification

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The measurement of the intracellular acetyl-CoA level was performed using an Acetyl-CoA Assay Kit (Solarbio, BC0980), and the total protein concentration was evaluated with a BCA Protein Assay Kit (TaKaRa, T9300A) according to the manufacturer’s instructions, as previously described [18 (link)].
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7

Measuring Acetyl-CoA Levels in Cells

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The method of the measurement of acetyl-CoA level was spectrophotometry, using acetyl-CoA Assay Kit from Solarbio Life Sciences. MDA-MB-231 cells were firstly harvested and lyzed using lysis buffer in the condition of ultrasound on ice. Then the supernatant was collected to determine the content of acetyl-CoA according to the instructions using a spectrophotometer (Thermo, Waltham, MA).
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8

Quantification of Acetyl-CoA and Protein in Aspergillus niger

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A total of 2 × 106 conidia/mL for each A. niger strain were inoculated into 50 ml of citric acid fermentation medium in 250 ml Erlenmeyer flasks at 28°C, and 200 rpm for 3 days. The obtained mycelia were washed and ground into powder in the presence of liquid nitrogen. The acetyl-CoA concentration was measured with an Acetyl-CoA Assay Kit (Solarbio, BC0980), and the total protein concentration was determined using a BCA Protein Assay Kit (TaKaRa, T9300A) according to the manufacturer’s instructions. Optical density at 340 nm and 562 nm was measured for Acetyl-CoA and protein contents quantification, respectively, with a UV-3600i Plus system (Shimadzu, Japan).
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9

Acetyl-CoA Quantification in HCC Cells

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Acetyl-CoA was measured in HCC cell lines by acetyl-CoA assay kit (Solarbio, China) according to the protocols provided by the manufacturer. Cells (1 × 104) were trypsinized, lysed with lysis buffer (the reagent 1 of the commercial kit.). After centrifuging at 13,000 × g for 10 min, supernatants were collected and used for acetyl-CoA measurements. Relative acetyl-CoA level (nmol/mg prot) = (1640 × ∆A + 0.012) ÷Cpr; ∆A = A2 − A1, A1: the absorbance value at 340 nm after 20 s, A2: the absorbance value at 340 nm after 80 s. Cpr: the protein value. The protein contents were determined using the BCA Protein Assay Kit.
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