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Ti microscope

Manufactured by Hamamatsu Photonics
Sourced in Japan

The Ti microscope is a high-performance optical microscope designed for a variety of laboratory applications. It features a titanium-alloy construction, providing durability and stability. The microscope offers a range of magnification options and high-resolution optics to enable detailed observation and analysis of samples.

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6 protocols using ti microscope

1

Multimodal Imaging of DREKA Embryos

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DREKA embryos were imaged on a Leica sp5 confocal microscope with a 20× water objective in GFP channel. All other fluorescent images were taken on a Nikon Ti microscope equipped with a Hamamatsu ORCA V2+ camera and a 10× plan fluo objective. Filter setting of CFP: excitation at 438 ± 24 nm, emission at 483 ± 32 nm; mEosFP and Alexa 488: excitation at 497 ± 16 nm, emission at 535 ± 22 nm.
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2

High-Resolution Microscopic Imaging

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Images were collected on a Nikon TI microscope with a Hamamatsu ImagEM (EM-CCD) camera (effective pixel size 160 nm) and Nikon 100x NA 1.45 TIRF objective. Z stacks were obtained at 0.2 μm slices. Total image depth was 3 μm. Only the top 3 slices of the cell were used in maximum intensity projections in Figure 3E.
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3

Imaging of Bacterial Cells in LB

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Phase contrast images were collected on a Nikon (Tokyo, Japan) Ti microscope equipped with a 6.5 μm-pixel Hamamatsu (Hamamatsu City, Japan) CMOS camera and a Nikon 100x NA 1.45 objective. Cells were collected by centrifugation at 6000 x g for 2 min and re-suspended in the original growth medium. Unless otherwise specified, cells were then placed on No. 1.5 cover glass, 24 × 60 mm, under a 1 mm thick agar pad (2–3% agar) containing LB supplemented with 20 mM magnesium chloride. Unless otherwise noted, all cells were imaged at 37°C on a heated stage.
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4

Quantifying Fluorescent Bead Dynamics

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The flowing beads were imaged using a Nikon Ti microscope equipped with a Hamamatsu CMOS camera. Images were captured at up to 100 Hz, which was several times faster than the frequency of beads ensuring that each bead was captured. The fluorescent intensity of the captured beads was measured using ImageJ (Bethesda, MD).
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5

Cell Orientation Experiments on Glass

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For the individual cell orientation experiments, cells were grown to mid-log (OD600 = 0.6–0.8) and a 50 μl droplet was placed on a 60 × 22 mm glass cover slip. After 5 min of attachment, treatment was added to the cells and incubated for 5 min. Cells were imaged using a Nikon Ti microscope using a Plan Apo λ 40X PH2, Hamamatsu Orca Flash 4, and Nikon NIS Elements imaging software.
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6

Conditional Depletion of Cell Wall Proteins

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TagO depletions in Figure 2A were conducted using strain BEG300 in liquid culture. Cells were prepared as overnights, as described above, then grown at the specified xylose concentration at 37°C in LB with 20 mM magnesium chloride for 4 hr. The cells were then imaged as described above in the ‘Imaging – MreB particle tracking’ section.
Pbp2A depletions shown in Figure 2 were conducted in liquid culture using strain BRB785 and BRB786 with an IPTG‐inducible Pbp2A fusion at the native locus with the redundant transpeptidase PbpH deleted. This strain was grown overnight in the presence of 2 mM IPTG, and then inoculated into CH media containing 2 mM IPTG, 0.015% xylose, and 20 mM magnesium chloride to stabilize the cells against lysis. At an OD600 of 0.6, cells were spun down in a tabletop centrifuge and washed three times in CH media lacking IPTG. Cells were placed under agar pads containing 20 mM magnesium chloride, and spinning disk confocal images were taken every 5 s on a Nikon Ti microscope with a 100 × 1.49 TIRF objective and a Hamamatsu ImagEM C9100-13 EM-CCD camera (effective pixel size of 160 nm).
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