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Transscript first strand cdna synthesis kit

Manufactured by Transgene
Sourced in China

The TransScript First-Strand cDNA Synthesis kit is a laboratory equipment product designed for the conversion of RNA into complementary DNA (cDNA). The kit provides the necessary reagents and protocols for this reverse transcription process, enabling the generation of cDNA from various RNA samples.

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14 protocols using transscript first strand cdna synthesis kit

1

Oxidative Stress Evaluation in Cells

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DMEM/F12, penicillin-streptomycin, fetal bovine serum, TRIzol reagent, SYBR Green, and RIPA buffer were supplied from Thermo Fisher Scientific (Waltham, MA, USA). Epidermal growth factor, and ITS (the mixture of insulin, transferrin, and selenious acids) were obtained from Corning Incorporated (New York, NY, USA), dimethyl sulfoxide, and genistein (synthetic product, purity ≥ 98%) were provided by Sigma-Aldrich (St. Louis, MO, USA). ROS assay kit was obtained from Beyotime Biotechnology (Shanghai, China). The cell counting kit (CCK-8) was bought from Med Chem Expression (Princeton, NJ, USA). The malondialdehyde (MDA), glutathione peroxidase (GSH-Px), catalase (CAT), and superoxide dismutase (SOD) assay kits were provided by Nanjing Jiancheng Bioengineering Institute (Nanjing, China). The Trans Script First-Strand cDNA Synthesis Kit was supplied by Trans Gen Biotech (Beijing, China). The VDF membranes, and ECL agent were provided by Bio-Rad Laboratories, Incorporated (Irvine, CA, USA).
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2

Quantitative Real-Time PCR Protocol for Cotton

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Total RNA of the cotton leaves and roots was isolated using the Plant Total RNA Extraction Kit (Sangon Biotech, Shanghai, China) according to the instruction manual. Two micrograms of RNA was reverse transcribed for first strand cDNA synthesized following the manufacturer’s protocol using the TransScript First-Strand cDNA Synthesis kit (TransGen).
According to the protocols of the Minimum Information for Publication of Quantitative Real Time PCR Experiments (Bustin et al., 2009 (link)), diluted cDNA was used for qPCR with SYBR green using the CFX96 TouchTM Real-Time PCR detection systems (Bio-Rad, Foster City, CA, United States). All gene expression was calculated using the dCt or ddCt algorithm. To normalize the gene expression, the UB7 gene was used as an internal standard. All the gene specific primers involved in this study were listed in Supplementary Table S1.
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3

Isolation and Characterization of Turbot Reproduction Genes

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Total RNA was extracted from the brains of immature turbot using the RNA Isolation Kit (Catalog No. 220011) (Fastagen Biotech, China). Quality and concentration of RNA were measured using 1.0% agarose gels electrophoresis and assessed by spectrophotometry (ND-2000, Nanodrop, USA). The first-strand cDNA was synthesized using a TransScript First-Strand cDNA synthesis kit (AT301-02) (Transgen, China) following the manufacturer’s instructions. Subsequently, cDNA fragments of turbot kiss1, kiss2, kissr2, and kissr3 were amplified with primers (Table 1). Finally, 5’-RACE and 3’-RACE were performed for full-length cDNAs using the SMARTer RACE cDNA Amplification Kit (Catalog No.634923) (Clontech, USA) with gene-specific primers (GSPs) (Table 1). The diluted first-round PCR products were used as templates for nested PCR with corresponding primers of GSP-nest (Table 1). All PCR programs were performed using a PTC-100 thermal cycle (Bio-Rad, USA). PCR was performed in a 25 μl reaction volume containing 1 μl of diluted cDNA, 1 μl of each primer (10 μM), 12.5 μl of Premix buffer (with dNTPs), and 9.5 μl ddH2O, with amplification procedure of denaturation at 94°C for 5minutes; 35 cycles of amplification at 94°C for 30 seconds, annealing with specific temperature of each primer (Table 1) for 45 seconds, elongation with 72°C for 30 seconds, an additional elongation at 72°C for 10 minutes.
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4

RNA Isolation and Real-Time PCR Analysis

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Total RNA was isolated from cells with RNeasy Mini Kit (QIAGEN) according to the manufacturer’s instructions. First-strand cDNA was synthesized using a TransScript First-Strand cDNA Synthesis kit (Transgen). Real-time PCR analysis was performed using SYBR Select Master Mix (Life technologies) in conjunction with an ABI Prism 7500 Sequence Detection System. The data were analyzed using the ΔΔCT method. Primer sequences used in this assay were as follows: TIF-IA, forward 5′-CATCCCGGCAGGGTATTGAA-3′, reverse 5′-CCTTCCGTGGAATCTGTCCC-3′; GAPDH, forward 5′-CGACCACTTTGTCAAGCTCA-3′, reverse 5′-AGGGGTCTACATGGCAACTG-3′.
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5

Transcriptional Profiling of Spinal Cord Injury in Zebrafish

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At 2 weeks after SCI or sham surgery, total RNA was extracted from the 2-mm segment of spinal cord directly caudal to the lesion site using an Eastep Total RNA extraction kit (Promega, Madison, WI, USA) in accordance with the manufacturer’s protocol. Then, 500 ng of total RNA was reverse transcribed using a TransScript First-Strand cDNA synthesis kit (TransGen Biotech, Beijing, China). RT-qPCR was subsequently performed with TransStart Green qPCR SuperMix (TransGen Biotech), and products were detected with a LightCycler 96 (Roche, Basel, Switzerland). The primers used are shown in Table 1. Relative expression of gene transcripts was assessed using the 2–ΔΔCt method, for which ΔΔCt = (Cttarget gene – CtGAPDH) injury – (Cttarget gene – CtGAPDH) sham. Three independent experiments were conducted for each condition, with 10 zebrafish in each group.
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6

Quantitative Real-Time PCR for Gene Expression

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Total RNA was isolated from cultured cells using an Eastep Total RNA Extraction Kit (Promega) according to the manufacturer's protocol. Then, total RNA was reverse transcribed using a TransScript First-Strand cDNA Synthesis Kit (TransGen Biotech). Real-time quantitative PCR was performed using TransStart Green qPCR SuperMix (TransGen Biotech) in a Real-Time quantitative PCR Detection System (Bio-Rad IQ2). A melting curve analysis was performed to ensure the amplification of a single product. All primers for cDNA amplification of various target genes were designed and optimized using Oligo 7.0 software (Molecular Biology Insights, West Cascade, CO, USA) and synthesized by Sangon Biotech (Shanghai, China). The relative expression levels of the target genes were calculated by normalizing the cycle threshold (Ct) values of the target gene to the Ct values of GAPDH (ΔCt) and determined using the 2−ΔΔCt method.
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7

Quantitative Analysis of miRNA and mRNA Levels

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Total RNA was isolated using TRIzol Reagent (ZYMO Research, Beijing, China) according to the manufacturer’s instructions. First-strand cDNA was generated using the TransScript First-Strand cDNA Synthesis Kit (TransGen Biotech, Beijing, China). Exon-exon qRT-PCR was performed using FastStart Universal SYBR Green Master Mix (Roche, Mannheim, Germany). U6 small nuclear RNA was used as an internal control for miR663a; the level of miR663AHG was normalized to that of GAPDH (for cultured cells) or Alu (for tissues). Similarly, the levels of TP53, JUNB, JUND, PIK3CD, P21, and TGFB1 mRNAs in cell lines were normalized to that of GAPDH. The relative mRNA levels further normalized to the control were further calculated using the typical 2-ΔΔCT method [7 (link)]. The relative level of pre-miR663a was calculated according to the formula [41 (link)]: pre-miR663a = 2-CT(pri-miR663a+pre-miR663a) − 2-CT(pri-miR663a). Sequences of these PCR primers are listed in Table S2.
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8

Transcriptome Analysis of Mouse Testis

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Reads generated by RNA-seq ranged from 12-24G per library. Qualified sequencing reads were mapped to the mouse genome GRCm38 using Bowtie2 and TopHat2. Aligned RNA-seq reads were assembled into transcripts using the Cufflinks program according to Gencode v.M8 (http://www.gencodegenes.org/), and transcript abundance was estimated in fragments per kilobase of exon per million fragments mapped (FPKM). Hypergeometric distribution was used to determine GO enrichment.
Total testis RNA was reverse transcribed using the TransScript First-Strand cDNA Synthesis Kit (TransGen, Beijing, China) according to the manufacturer’s instructions. Quantitative Real-time PCR (2 × SYBR Green Fast qPCR Master Mix; Biotool, Houston, TX, USA) and RT-PCR were performed using the primers listed in Supplementary Table 1s. Gene expression was normalized to actin.
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9

Bacterial RNA Isolation and qPCR Analysis

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Overnight bacterial cultures were 1:100 diluted and grown to OD600 of 1.0. Total RNA was isolated using the RiboPure RNA purification kit, bacteria (Thermo Fisher Scientific) following the manufacturer’s protocol and the purity and quality of RNA were determined by agarose gel electrophoresis. RNA concentration was measured by NanoDrop 2000C (Thermo Fisher Scientific). 2 μg RNA was used for cDNA synthesis by TransScript First-Strand cDNA Synthesis kit (TransGen Biotech) following the protocol provided by the manufacturer. Quantitative PCR (qPCR) was performed by using PowerUp SYBR green master mix (Thermo Fisher Scientific) in a QuantStudio 6 Flex real-time PCR system (Applied Biosystems). The rpoD gene was selected as the internal reference for data analysis. The results were presented as the mean of three independent biological repeats.
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10

RNA Extraction and RT-qPCR Analysis in Plants

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Total RNA of cotton or tobacco plants was extracted using the Plant Total RNA Extraction Kit (Sangon Biotech, Shanghai, China). For first-strand cDNA synthesis, 1 µg of total RNA was carried out the reverse-transcription reaction using TransScript First-Strand cDNA Synthesis kit (TransGen). All cDNA samples were diluted by 20-fold and stored at −70 °C until further analysis. RT/qRT-PCR was employed to monitor related genes expression level in plant tissues and treatment samples. For qRT-PCR analysis, the SYBR Green Real-Time PCR Master Mix (TsingKe, Beijing, China) was used on the CFX96 TouchTM Real-Time PCR detection systems (Bio-Rad, Foster City, United States). The Ntactin and GhUb-7 gene were used as internal control for normalization, respectively. All reactions were performed in three biological repeat with three technical repeats. The primers used are shown in Table 1.
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