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Superose 6 3.2 300

Manufactured by GE Healthcare

Superose 6 3.2/300 is a size exclusion chromatography column used for the separation and purification of biomolecules. It is designed for the fast and efficient fractionation of proteins, peptides, and other macromolecules based on their size and molecular weight.

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5 protocols using superose 6 3.2 300

1

Size Exclusion Chromatography and MALS Analysis

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TPX2, TPX2ΔN, TPX2mini and bovine serum albumin (Sigma-Aldrich) were buffer exchanged into SEC-MALS buffer containing 50 mM HEPES (pH 7.5), 150 mM KCl, 2 mM MgCl2, 50 mM arginine, 50 mM glutamate, 0.005% (vol/vol) Brij-35, 5 mM 2-ME and ultracentrifuged (278,088.3 × g, 10 min, 4°C). The samples (40 μl volume, at 2 – 3 μg/μl concentration) were then subjected to size exclusion chromatography using Superose 6 3.2 300 (GE Healthcare) in conjunction with MALS (DAWN8+/OptiLab t-REX; Wyatt) at room temperature. Three independent runs were performed for each construct.
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2

Purification of Phospholipase C Proteins

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The harvested cells were thawed on ice and resuspended in solubilization buffer: 20 mM HEPES–NaOH pH 7.4, 150 mM NaCl, 10 mM MgCl2, 1% (w/v) protease inhibitor mix, and 2% (w/v) GDN. 5 ml of the solubilization buffer was added per gram of cells. The lysate was homogenized and incubated at 4 °C for 1 h. The lysate was centrifuged at 100,000 ×g for 1 h at 4 °C, and the cleared supernatant was incubated with pre-equilibrated streptavidin agarose beads (ThermoFisher, Pierce). After washing the beads three times with washing buffer (20 mM HEPES–NaOH pH 7.4, 150 mM NaCl, 0.02% (w/v) GDN, and 2 mM PMSF), the protein was eluted with 2.5 µM biotin in 20 mM HEPES–NaOH pH 7.4, 150 mM NaCl, and 0.02% (w/v) GDN. The eluate was concentrated with a 100-kDa cut-off concentrator (Amicon-Ultra 0.5 ml, Merck, Millipore). The PLCs were isolated by size exclusion chromatography (Superose 6 3.2/300, GE), and the peak fraction harvested for further analysis.
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3

Size Exclusion Chromatography and MALS Analysis

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TPX2, TPX2ΔN, TPX2mini and bovine serum albumin (Sigma-Aldrich) were buffer exchanged into SEC-MALS buffer containing 50 mM HEPES (pH 7.5), 150 mM KCl, 2 mM MgCl2, 50 mM arginine, 50 mM glutamate, 0.005% (vol/vol) Brij-35, 5 mM 2-ME and ultracentrifuged (278,088.3 × g, 10 min, 4°C). The samples (40 μl volume, at 2 – 3 μg/μl concentration) were then subjected to size exclusion chromatography using Superose 6 3.2 300 (GE Healthcare) in conjunction with MALS (DAWN8+/OptiLab t-REX; Wyatt) at room temperature. Three independent runs were performed for each construct.
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4

Structural analysis of pol II-AuscFv complex

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10-subunit pol II (Liu et al., 2010 (link)) was incubated with 3-fold molar excess of recombinant Rpb4/7 (Sakurai et al., 1999 (link)) and 4-fold molar excess of each of the 4 AuscFvs against pol II, overnight on ice. The samples were diluted to a final pol II concentration of 1 μM and fixed with 0.04% glutaraldehyde per μg of pol II for 1 hour at 4°C, followed by quenching with 1M Tris-HCl. The complex (4AuscFvpolII) was purified by size exclusion chromatography on a Superose 6 3.2/300 (GE healthcare) column in 20 mM HEPES pH 7.5, and 100 mM potassium acetate.
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5

Lipid Membrane Reconstitution Protocol

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1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) was purchased from Avanti Polar Lipids (USA), sodium cholate hydrate, octylβ-D-glucopyranoside (OG) and n-Dodecyl β-D-maltoside (DDM) were purchased from Sigma-Aldrich. SM2 Bio-beads was obtained from Bio-Rad. Superose 6 3.2/300 and Superdex 200 PC 3.2/30 columns were purchased from GE Healthcare. Cu 300 mesh grids and C-flat grids were obtained from Agar Scientific and Protochips respectively.
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