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Cell quest pro software

Manufactured by Beckman Coulter
Sourced in United States

Cell Quest Pro software is a data acquisition and analysis system designed for flow cytometry. It enables users to collect and analyze data from Beckman Coulter flow cytometers.

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6 protocols using cell quest pro software

1

Apoptosis Quantification by FACS

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Trypan blue exclusion was used to assess cell viability. The induction of apoptosis was quantified by fluorescence-activated cell sorting (FACS) on treated cells stained with annexin V. Briefly, cells were washed, resuspended with annexin V binding buffer, stained with fluorescein isothiocyanate (FITC)–conjugated annexin V (Roche, Mannheim, Germany) for 15 min at room temperature in the dark, and then washed and counterstained with propidium iodide (PI). The analysis was performed by a FACSCalibur flow cytometer (Becton Dickinson, Franklin Lakes, NJ) at a wavelength of 488 nm using Cell QuestPro Software (Beckman-Coulter, Fullerton, CA).
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2

Apoptosis Analysis of RGC-5 Cells

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RGC-5 cells were treated for 16 hours with 100 μM PA with or without 50 ng/mL NGF pretreatment. Cells were then digested, washed twice with ice-cold phosphate buffered saline (PBS) then centrifuged for 5 minutes and re-suspended in 195 μL Annexin V-FITC binding buffer (Beijing 4A Biotech, China) as described previously (Zeng et al., 2016b). Annexin V-FITC (20 μg/mL) was added and the cells incubated away from light at 20–25°C for 10 minutes. Then cells were then washed with ice-cold PBS and resuspended in binding buffer. Propidium iodide (PI) (1 mg/mL) (Beijing 4A Biotech) was then added and the cells incubated in darkness. Apoptosis was quantified by flow cytometry using Cell Quest Pro software (Beckman Coulter, Brea, CA, USA).
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3

CD97 Expression in LPS-Treated Macrophages

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Macrophages were treated with LPS (from 0 μg/mL to 60 μg/mL) for 24 h. After being washed twice with phosphate buffer saline, cells were incubated with FITC-conjugated-anti-CD97 (BD, USA). Then, analysis was performed using a flow cytometer (Beckman, USA) with cell Quest Pro Software.
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4

Quantifying Microglial Apoptosis by Flow Cytometry

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The apoptosis of microglia was evaluated using an Annexin V-FITC/PI apoptosis detection kit (BD Biosciences, CA, USA) via flow cytometry analysis [38 (link)]. After washed with phosphate buffered saline, microglial cells with indicate treatments were resuspended in binding buffer and then stained with Annexin V-FITC (5 µL; 10 min) and propidium iodide (PI) (5 µL; 5 min) at room temperature in the darkness according to the manufacturer’s instructions. The apoptosis rate of stained microglia was analyzed by a flow cytometry (FACScan, BD Biosciences) using Cell Quest Pro software (Beckman Coulter, CA, USA). All experiments were repeated three times.
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5

Flow Cytometry Analysis of Th17 and Treg Cells

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Cells were aliquoted into tubes and washed once in phosphate buffered saline (PBS). For Th17 analysis, the cells were incubated with fluorescein isothiocyanate (FITC) anti-human CD4 (eBioscience, San Diego, CA, USA) at 4°C for 20 min. For Treg analysis, the cells were incubated with PerCP anti-human CD4 (eBioscience, USA) and FITC anti-human CD25 (eBioscience, San Diego, CA, USA) at 4°C for 20 min. After the surface staining, the cells were then fixed and permeabilized with Perm/Fix solution (Beckman Coulter) and were stained with PE anti-human IL-17A (eBioscience) for Th17 detection or PE anti-human Foxp3 (eBioscience, CA, USA) for Treg detection. All staining was performed according to manufacturer’s protocols. Isotype controls were used to enable correct compensation and confirm antibody specificity. Samples were analyzed using a FACS Calibur flow cytometer and Cell Quest Pro software (Beckman Coulter).
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6

Apoptosis Evaluation by Annexin V-APC/7-AAD

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Cells were transduced either with sh-ctrl-or sh-SZF1-expressing lentiviruses harboring the EGFP instead of the RFP reporter gene. To detect apoptotic cells, annexin V-APC/7-amino-actinomycin (7-AAD) staining was performed by using the Annexin V-APC Apoptosis Detection Assay from BD Biosciences according to the manufacturer's instructions. Results were acquired with a FACS Calibur flow cytometer, and data were analyzed with CellQuest Pro software (Beckman Coulter).
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