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Isopropyl β d 1 thiogalactopyranoside (iptg)

Manufactured by NZYTech

IPTG (Isopropyl β-D-1-thiogalactopyranoside) is a synthetic chemical compound used as an inducer in bacterial expression systems. It functions by binding to the lac repressor, thereby relieving repression and allowing transcription of downstream genes.

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2 protocols using isopropyl β d 1 thiogalactopyranoside (iptg)

1

Bacmid Recombination and Baculovirus Production

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For bacmid recombination [51 ], chemically competent DH10EmBacY cells were transformed with the expression construct of interest and incubated overnight in the shaker at 37°C in 2 mL of Luria-Bertani (LB) medium. Culture was plated on LB agar plates containing 50 μg/mL kanamycin (NZYTech), 10 μg/mL tetracycline (AppliChem), 10 μg/mL gentamycin (Sigma-Aldrich), 0.5 mM IPTG (NZYTech) and 40 μg/mL X-Gal (NZYTech), and incubated at 37°C. White colonies containing recombined bacmid were picked and cultured overnight in LB medium supplemented with kanamycin, tetracycline, and gentamycin in the shaker at 37°C. Bacmid DNA was isolated by alkaline lysis followed by isopropanol precipitation. For virus production [51 ], Sf21 cells in 6-well plates (106 cells/well) were transfected with bacmid DNA using X-tremeGene HP DNA Transfection Reagent (Roche). 50 hr after transfection, the supernatant containing initial virus V0 was collected and used to infect a 25-mL culture (SFM4 medium, Hyclone) of Sf21 cells (0.5 × 106 cells/mL) to produce V1 virus. Culture density was kept at 1 × 106 cells/mL (diluted with fresh medium when needed) until cell proliferation ceased. 48 hr after proliferation arrest, V1 was harvested by centrifuging the cell suspension (5 min at 800 × g) and collecting the supernatant. V1 stock was stored at 4°C in the dark.
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2

Phage Display Biopanning of SK-BR-3 Cells

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A commercial phage display library, Ph.D. TM -C7C library purchased from New England BioLabs (NEB), was used. The library consists of 1.2 × 10 9 electroporated sequences and a concentration of 1 × 10 13 plaque-forming units per milliliter (PFUs/ml). An adaptation of a biopanning protocol described by Giordano et al. (2001) (link) using SK-BR-3 cell line as target was followed as stated elsewhere (Nobrega et al., 2016; (link)Silva et al., 2016) (link). This procedure was repeated for a total of four rounds of panning. A final counter-selection step was included using the non-tumorigenic MCF-10-2A cell line. Due to titer losses, the phage pool was amplified in the last two rounds using a modified E. coli JM109 + strain (Silva et al., 2016) (link) which has a plasmid (pRARE) that encodes for six low abundance tRNAs, reducing the amplification bias (Umlauf et al., 2015) (link). The phage titer was determined for each round of selection using the double layer agar technique in LB plates (25 g/L Luria Bertani broth [Nzytech] with 20 g/L agar [VWR])
supplemented with 0.25 mM IPTG (Nzytech) and 0.05 g/L X-gal (Nzytech). The number of transducing units was calculated by counting the blue plaques after overnight incubation at 37°C.
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