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99 protocols using pv 9000

1

Immunohistochemical Analysis of Skin Tissue

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The prepared paraffin sections of skin tissues were heated in a 60°C oven for 30 min, dewaxed, and hydrated in a routine fashion followed by microwave antigen retrieval using 1 mM Tris-ethylenediamine tetraacetic acid (pH = 8.0) as well as endogenous peroxidase blocking with 3% H2O2-methanol.The sections were subsequently incubated with primary antibodies against EZH2 (1:250, ab191080, Abcam), IL-17A (1:600, ab214588, Abcam), Ki-67 (1:200, ab16667, Abcam), or SFMBT1 (1:1000, HPA036153, Sigma-Aldrich, St. Louis, MO, USA) in a 4°C refrigerator overnight. The next day, the sections were probed with polymer enhancer (PV-9000, ZSGB-Bio, Beijing, China) at ambient temperature for 20 min. The sections were incubated with enzyme-labeled anti-rat/rabbit polymer (PV-9000, ZSGB-Bio) at ambient temperature for 30 min and visualized with 3,3′-diaminobenzidine tetrahydrochloride for 5 min. The sections were then counterstained with hematoxylin, followed by the addition of ammonium hydroxide. Finally, the sections were routinely dehydrated, cleared, and sealed followed by observation and photograph under an inverted microscope (CX41, Olympus Optical Co., Ltd, Tokyo, Japan).
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2

Immunohistochemical Analysis of Tumor Samples

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The paraffin sections of transplanted tumor were baked for 30 min at 60 °C in an oven, dewaxed, hydrated, immersed in xylene I and II and gradient alcohol for 5 min, and finally rinsed under tap water for 2 min. Subsequently, microwave antigen retrieval was conducted with 1 mM Tris-ethylene diamine tetraacetic acid (pH 8.0). Following cooling to room temperature, the sections were then treated with 3% H2O2-methanol for 10 min to block endogenous peroxidase (POD) activity. The sections were subsequently immunostained with primary antibody against MEST (1: 100, ab230114) and ATGL (1: 500, ab207799, Abcam) overnight at 4 °C. Following three washes with 0.1% phosphate buffer solution Tween-20 (5 min/time), on the following day, the sections were further immunostained with polymer enhancer (PV-9000, ZSGB-Bio, Beijing, China) for 20 min and then with enzyme-labeled anti-rat/rabbit polymers (PV-9000, ZSGB-Bio) for 30 min. Subsequently, the sections were developed for 5 min with 3,3'-diaminobenzidine tetrahydrochloride (DAB), which was terminated by the addition of distilled water. The sections were then counterstained by hematoxylin, differentiated, blued, dehydrated, cleared and sealed with neutral gum. Finally, the sections were observed and photographed under an inverted microscope (CX41, Olympus Optical Co., Ltd., Tokyo, Japan).**
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3

Immunohistochemical detection of CCNO and RACK1

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The prepared paraffin sections were dewaxed and hydrated. After microwave antigen retrieval using 1 mM ethylenediaminetetraacetic acid (EDTA) (pH 8.0), the sections were added with 3% H2O2-methanol. Next, the sections were added with primary antibody against CCNO (ab47682, 1:500, Rabbit, Abcam, Cambridge, UK), and RACK1 (5432, 1:1000, Rabbit, Cell Signaling Technologies, Beverly, MA, USA), and incubation was carried out overnight at 4 °C. Thereafter, the sections were re-probed with polymer enhancer (PV-9000, ZSGB-Bio, Beijing, China) at room temperature for 20 min. Next, the sections underwent further incubation with enzyme-labeled anti-mouse/rabbit polymer (PV-9000, ZSGB-Bio, Beijing, China) at room temperature for 30 min, and developed using 3,3′-diaminobenzidine (DAB) for 5 min. After the development was halted by distilled water, the sections were counterstained with hematoxylin, differentiated and blued. The sections were conventionally hydrated, cleared and sealed. Finally, the sections were photographed and observed under an inverted microscope (CX41, Olympus, Tokyo, Japan).
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4

Immunohistochemical Analysis of ALOX5, ALOX12, and CISD1 in Pancreatic Cancer

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Immunohistochemistry was performed by two-step method according to the instructions (PV-9000; ZSGB-BIO, Beijing, China). Pancreatic cancer samples were fixed in 10% formalin, embedded in paraffin, and processed into 5-µm sequential sections. The samples were de-waxed with ethanol and blocked to inhibit the endogenous peroxidase activity. After this, samples were heated in a microwave for antigen retrieval, cooled to room temperature, and blocked using goat serum for 30 min at 37 °C. The samples were incubated overnight at 4 °C with rabbit anti-ALOX5 (ab169755), anti-ALOX12 (ab211506), and anti-CISD1 (ab203096) (Abcam, USA) (1:200), followed by incubation with horseradish peroxidase-coupled goat anti-rabbit secondary antibody (PV-9000; ZSGB-BIO, Beijing, China) at 37 °C for 30 min. The samples were then stained with 3,3′-Diaminobenzidine (DAB). Cell nuclei were stained blue with hematoxylin. The sections were then dehydrated, cleared with xylene, and mounted. ALOX5, ALOX12, and CISD1 expressions were determined by immunohistochemistry (IHC) using the streptavidin peroxidase method, with adjacent tissues serving as the controls. The experimental procedure was performed as per the manufacturer’s instructions. Image-Pro Plus 6.0 Software (Media Cybernetics, USA) was used to analyze protein expression and perform statistical analysis of the results obtained by IHC.
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5

Immunohistochemical Analysis of KDM5A and CD31 in FFPE Tissues

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Formalin‐fixed paraffin‐embedded 5‐μm tissue sections were incubated at 60°C for 30 minutes and then deparaffinized in xylenes, rehydrated through a graded series of alcohol concentrations for 5 minutes and rinsed by water for 2 minutes. After antigen retrieval by 1mM Tris‐EDTA (pH = 8.0) was performed, all sections were rinsed with phosphate buffer saline (PBS) for three times and left to block at room temperature in 3% H2O2‐methanol for 10 minutes, followed by the coating of antibodies at room temperature for overnight at 4℃. Afterwards, the sections were rinsed three times in 0.1% PBST, incubated with an Enhancer buffer (PV‐9000, Zsbio, Beijing, China) for 20 minutes and incubated with enzyme‐labelled anti‐mouse/rabbit secondary antibodies (PV‐9000, Zsbio) for 30 minutes. Subsequently, the proteins were subjected to diaminobenzidine (DAB) development and left to counterstain with haematoxylin for 1 minute. After the differentiation and addition of blue coloration, the sections were dehydrated by gradient concentration ethanol, transparentized and sealed by neutral resins. Immunohistochemistry images were obtained using an upright microscope (BX53, OLYMPUS, Japan) and analysed and scored by experienced pathologists. Primary antibodies used: KDM5A (1:400, Abcam, Cambridge, UK, ab217292) and CD31 (1:400, Abcam, ab9498).
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6

Immunohistochemical Analysis of USP22 in Osteosarcoma

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The paraffin sections of osteosarcoma tissues were placed in an oven at 60°C for 30 min, dewaxed, and hydrated with toluene I, xylene II, and gradient alcohol for 5 min each, successively. The antigens were retrieved using 1 mM Tris-ethylene diamine tetraacetic acid (pH 8.0) in a microwave and then cooled to room temperature. Endogenous peroxidase (POD) was blocked with 3% H2O2-methanol for 10 min at room temperature. Primary antibody against USP22 (1:500, ab195289; Abcam) was added into the sections, which were incubated overnight in a refrigerator at 4°C. On the next day, the sections were incubated with polymer enhancer (PV-9000; ZSGB-Bio, Beijing, P.R. China) at room temperature for 20 min. Enzyme-labeled anti-mouse/rabbit polymer (PV-9000; ZSGB-Bio) was dripped into sections, which were incubated for 30 min at room temperature and then developed with diaminobenzidine for 5 min. After the development was terminated by the addition of distilled water, sections were counterstained by hematoxylin and turned blue after differentiation. Finally, slides were dehydrated, permeabilized, mounted with neutral gum, and observed under an inverted microscope (CX41; Olympus, Tokyo, Japan).
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7

Vimentin Immunohistochemistry Protocol

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The paraffin-embedded sections from individual samples were permeabilized with 0.2% Triton and blocked with 5% bovine serum albumin (BSA) in 0.1 M phosphatebuffered saline (PBS) for 30 min to reduce nonspecific binding. Then, the samples were incubated with primary antibodies against Vimentin (15200, ab9547, Abcam, Cambridge, MA, USA) followed by a biotinylated secondary antibody (PV-9000, Beijing ZSGB-Bio, Beijing, China). The samples were incubated with the IgG K-light chain (15200, M0809-1, Hangzhou HuaAn Biotechnology Company, Hangzhou, China) at a similar concentration as the primary antibody controls, followed by the same biotinylated secondary antibody (PV-9000, Beijing ZSGB-Bio, Beijing, China). Immunoreactivity was visualized with diaminobenzidine (DAB), and brown staining was considered a positive result.
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8

Immunohistochemical Analysis of UCP1 Expression

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H&E staining was carried out as the standard protocol described. Paraffin sections were dewaxed, hydrated, and stained with hematoxylin and eosin, respectively, and then dehydrated and mounted. IHC was performed to measure the expression of UCP1 protein in mouse adipose tissues as described previously [47 (link)]. Section was dewaxed and hydrated, followed by antigen retrieval. Endogenous peroxidase was blocked by 3% hydrogen peroxide solution (PV-9000, ZSGB-Bio, Beijing, China). The section was incubated with the blocking goat serum (C0265, Beyotime, Shanghai, China) for 15 min and immunostained with anti-UCP1 antibody (ab10983, Abcam, Cambridge, UK) overnight at 4 °C. After three washes with PBS, the slides were stained with horseradish peroxidase-conjugated anti-rabbit IgG (PV-9000, ZSGB-Bio, Beijing, China) and DAB Chromogenic Kit (ZLI-9018, ZSGB-BIO, Beijing, China), followed by counterstaining with hematoxylin. The full section was scanned by using the Panoramic Scanning Microscope-VS120 (Olympus Life Science, Tokyo, Japan). Cell size and the density of UCP1-positive staining (brownish yellow) was analyzed by Image J.
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9

Immunohistochemistry Assay for KLRB1

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IHC was performed using a two-step method according to the manufacturer’s instructions (PV-9000; ZSGB-BIO, Beijing, China). BRCA samples were fixed in 10% formalin, paraffin-embedded, and sectioned into 5-µm slices. The samples were de-waxed with ethanol and blocked to inactivate the endogenous peroxidase activity. Subsequently, antigen retrieval was achieved by heating the samples in a microwave, followed by cooling to room temperature. Blocking was performed using goat serum for 30 minutes at 37 ℃. The samples were then incubated overnight at 4 ℃ with rabbit anti-KLRB1 (Thermo Fisher Scientific 17-5941-82) (1:200). Afterward, incubation with horseradish peroxidase-coupled goat anti-rabbit secondary antibody (PV-9000; ZSGB-BIO, Beijing, China) was conducted at 37 ℃ for 30 minutes. The samples were then stained with 3,3'-diaminobenzidine (DAB). Cell nuclei were stained blue with hematoxylin. The sections were then dehydrated, cleared with xylene, and mounted. KLRB1 expressions were determined by IHC using the streptavidin peroxidase method, with adjacent tissues serving as the controls. The experimental procedure was performed as per the manufacturer’s instructions. Image-Pro Plus 6.0 Software (Media Cybernetics, USA) was used to analyze protein expression and perform statistical analysis of the results obtained by IHC.
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10

Immunohistochemical Staining of RARRES2 in Tissue Sections

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The formalin fixation and paraffin embedding tissue sections were dried overnight at 60 ℃, deparaffinized in xylene for 30 min, rehydrated through a gradient alcohol solution, boiled for 15 min in antigen retrieval solution containing EDTA (ZLI-9066, Zsgb-Bio, China), treated for 10 min with endogenous peroxidase blocker (PV-9000, Zsgb-Bio, China), and incubated for 10 min with normal goat serum (ZLI-9022, Zsgb-Bio, China). The sections were incubated overnight at 4 ℃ with a rabbit monoclonal primary antibody against RARRES2 (10216-1-AP, Proteintech, China), then incubated for 25 min with biotinylated secondary antibodies (PV-9000, Zsgb-Bio, China). Color development was performed with 3,3N-diaminobenzidine tertrahydrochloride (ZLI-9019, Zsgb-Bio, China). The sections were counterstained with hematoxylin, mounted by slides with neutral balsam, and scanned by Aperio patholgy scanner (Leica, Germany).
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