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Dulbecco modified eagle medium (dmem)

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DMEM (Dulbecco's Modified Eagle Medium) is a cell culture medium formulation commonly used to support the growth and maintenance of various cell types in vitro. It provides a balanced salt solution, amino acids, vitamins, and other essential components required for cell proliferation and survival.

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18 protocols using dulbecco modified eagle medium (dmem)

1

Culturing Confluent Mesenchymal Stem Cells

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Confluent MSCs, at passages 3–5, were washed in DMEM and cultured for 24 h in minimal base medium consisting of DMEM (Stem Cell Technologies, London, UK) supplemented with 1% insulin-free Sato (containing 100 μg/ml bovine serum albumin, 100 μg/ml transferrin, 0.06 μg/ml progesterone, 16 μg/ml putrescine, 0.04 μg/ml selenite, 0.04 μg/ml thyroxine, 0.04 μg/ml tri-iodothryonine), 1% holo-transferrin, 1% penicillin/streptomycin and 0.5% L-glutamine (Sigma-Aldrich, Gillingham, UK). The medium was then removed prior to being used within culture experiments. MSC conditioned medium in this study was prepared from >10 independent MSC samples.
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2

Isolation of Mammary Tumor Cells

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Mammary tumors developed in PyMT/+ and CIRP/PyMT mice were isolated from the mice at necropsy (14 weeks of age). The tumors were washed in PBS, cut into 6–8 roughly equal pieces, and placed in a 10 mL digestion solution of DMEM/F12 + 5% fetal bovine serum with 1× collagenase/hyaluronidase in DMEM (Stemcell Technologies Cambridge, MA, USA), 0.05 U/mL Dispase (Stemcell Technologies Cambridge, MA, USA), and DNase I Solution (Stemcell Technologies Cambridge, MA, USA). The tumors were incubated at 37 °C for 100 min and briefly vortexed at 60% power every 10 min. The resulting cell suspension was then vortexed at full power for 30–45 s and then strained through a 70 μm cell strainer. The cells were then pelleted and washed in PBS twice. The cells were then resuspended in flow cytometry staining buffer containing PBS with 2 mM EDTA and 5% FBS.
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3

Isolation and Characterization of Decidual NK Cells

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Whole implantation sites on GD 9.5 were collected in sterile saline and placed under a dissection microscope. After removing the nascent embryo and placenta, decidual tissue was isolated, minced, and then digested in Gentle Collagenase/Hyaluronidase in DMEM (07919, StemCell Technologies) for 2 h at 37°C with moderate agitation as per the manufacturer’s instructions. Digested tissue was passed through a 100 μm cell strainer, and the resulting single cell suspension was layered over Lymphoprep (StemCell Technologies). After centrifugation, the buffy coat containing platelets, leukocytes, and other mononuclear cells was carefully aspirated, washed, and resuspended in RPMI-1640 medium supplemented with 1% fetal bovine serum (FBS) and 10 ng/mL rat recombinant IL-15 (PeproTech). Cells were then placed in cell culture plates at 1.0 × 106 cells/mL in a gas and temperature-controlled incubator (5% CO2, 37°C) for 24 h. After the incubation, conditioned media containing suspended cells were removed and centrifuged at 300 × g for 10 min. The supernatant was aliquoted and stored at −20°C as a source of decidual conditioned media and to measure levels of OPN. RNA was isolated from both the pelleted cells and the cells that adhered to the cell culture plate to evaluate expression of NK cell markers and Spp1.
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4

Multilineage Differentiation of Mesenchymal Stem Cells

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Passage 2/3 MSCs (n = 5 matched donor–derived cultures for BML and non‐BML bone tissue digests) were induced toward osteogenesis, chondrogenesis, and adipogenesis, using standard protocols 21. For osteogenesis and chondrogenesis, we used StemMACS OsteoDiff and ChondroDiff medium, respectively (Miltenyi Biotec); adipogenic cultures were grown in DMEM with 10% FCS, antibiotics, 10% horse serum (StemCell Technologies), 0.5 mM isobutylmethylxanthine, 60 μM indomethacin, and 0.5 μM hydrocortisone (all from Sigma).
Differentiation assessment was performed as previously described 21. Briefly, alkaline phosphatase activity was visualized on day 14 postinduction. Calcium deposits were stained using alizarin red on day 21, and total calcium produced by cultures was measured using a Calcium Detection Kit (Sentinel Diagnostics). Biochemical assessment of the glycosaminoglycans (GAGs) was performed on 3 of 4 chondrogenic pellets grown for 21 days. The remaining pellet was used for histologic analysis; 4‐μm sections were cut using a Leica CM1950 cryostat, fixed, and stained with toluidine blue. Adipogenic cultures were stained with oil red O on day 21 postinduction.
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5

B16F10 Melanoma Cell Culture

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The B16F10 melanoma cell line (Mus musculus) used in the tumor model was obtained commercially from ATTC (CRL-6475). The cell line was confirmed pathogen-free by the IMPACT 1 mouse profile test (IDEXX BioResearch). Cells were cultured in Dulbecco's Modified Eagle's Medium (DMEM, StemCell Technologies) supplemented by 10% FBS, 100 U/mL penicillin and 100 μg/mL streptomycin at 37°C in a humidified incubator containing 5% CO2. Cells grown to approximately 90% confluence were washed with sterile 1× PBS (pH 7.4), followed by trypsinization.
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6

Monitoring Leukemic Cell Transformation

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Bone marrow from 5-fluorouracil-treated C57BL6/J mice was harvested and transduced with NUP98-NSD1-GFP and NRASG12D-BFP vectors. Four days after transduction, cells were assessed for NRAS-BFP+, NUP98-NSD1-GFP+, and NUP98-NSD1+NRAS-GFP+BFP+ population expression by flow cytometry. Cells were grown in Dulbecco’s modified Eagle medium (DMEM) (STEM cell Technologies, Cologne, Germany) supplemented with 15% fetal bovine serum (FBS) (Sigma-Aldrich, Munich, Germany), 10 ng/mL human interleukin-6 (hIL-6), 6 ng/mL murine interleukin-3 (mIL-3), and 20 ng/mL murine stem cell factor (mSCF; all from PeproTech, Hamburg, Germany). Changes in fluorochrome expression in NRAS-BFP+, NUP98-NSD1-GFP+, and NUP98-NSD1+NRAS -GFP+BFP+ cells were monitored until day 12 of in vitro culture using the BD LSRII flow cytometer (BD Biosciences, Heidelberg, Germany).
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7

Differentiation of iPSCs into Myoblasts

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Human induced pluripotent stem cell (iPSCs) lines ND41865, ND35662, ND39032 were obtained from the Coriell Institute for Medical Research. iPSCs were passaged a maximum of 12 times per recommended NIH passaging protocols. Cells from passages 6 to 12 were used in myoblast differentiation experiments. Myoblast differentiation was performed strictly following a protocol published by Chal et al.21 (link). Briefly, iPSC cultures were maintained in mTESR1 (Cat# 85850, StemCell Technologies) or TESR-E8 (Cat# 05990, StemCell Technologies) on matrigel-coated (Cat# 354230 Corning Life Sciences) surfaces to a 15–20% confluence before commencing myoblast differentiation. Cultures were maintained until 35–40 days of differentiation and harvested. At the end of myoblast differentiation, the cultures were re-plated at 1:6 in MyoCult serum free supplemented 1000 mg/L DMEM (Cat #05982; StemCell, Technologies) for myoblast expansion. Medium was refreshed every other day until 50–60% confluence. Myogenic progenitors were harvested and cryopreserved for downstream applications. All cultures were maintained in humidified air supplemented with 5% CO2, at 37 °C.
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8

Lentiviral Particle Production in 293T and H9M Cells

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293T cells for the production of lentiviral particles were maintained in DMEM with 4,500 mg/L glucose (STEMCELL Technologies) supplemented with 10% Performance Plus fetal calf serum (PP-FCS), 100 U/mL penicillin + 100 μg/mL streptomycin (Pen/Strep), and 0.1 mg/mL sodium pyruvate (all Gibco; DMEM+++). H9M cells were maintained in 36SF medium consisting of DMEM supplemented with 15% FCS (STEMCELL Technologies, product #06250), Pen/Strep, glutamine and 100 ng/mL murine stem cell factor (mSCF; R&D Systems), 10 ng/mL human interleukin-6 (hIL-6), and 6 ng/mL murine IL-3 (mIL-3) (both STEMCELL Technologies).
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9

Tumor Sphere Formation Assay

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Sorted cells (1 × 103 cells) were seeded in a 24-well ultra-low adherent plate (Corning) in 0.5 mL of mixed medium to perform sphere formation detection. The medium contained 32% MethoCult medium, 20% MammoCult basal human medium with a final concentration of 2% MammoCult proliferation supplements and 48% DMEM supplemented with final concentrations of 100 pg/mL EGF, 50 ng/mL bFGF, 5 ng/mL stem cell factor, 1 μM hydrocortisone, and 5 mg/mL insulin, all obtained from STEMCELL Technologies. The cells were cultured at 37 °C in a 1% O2 and 5% CO2 humidified atmosphere for 14 d. The number of tumor spheres was counted under microscope.
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10

Isolation of Testicular Cells

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Testes were obtained, and tunica albuginea membrane was removed. Released seminiferous tubules were gently separated in PBS. Roughly separated tubules were incubated in collagenase type IV in 1 mg/mL DMEM (5 mL for one testis pair; Stem Cell Technologies, Inc., 07909) at 37°C while rotating. After an initial 10-min incubation, the collagenase solution with released interstitial cells was removed, and the same volume of fresh collagenase solution was added to the seminiferous tubules. Tubules were further dissociated by incubating for another 10 min at 37°C with occasional stirring and pipetting up and down. Dissociated tubules were centrifuged at 300g for 3 min. The supernatant was removed, and trypsin (Thermo Fisher Scientific 12605010) solution was added to make a single-cell suspension. After 5 min of trypsin incubation at 37°C with occasional mixing, dissociated cells were passed through 40-µm-wide cell strainers. One volume of 4°C DMEM (Thermo Fisher Scientific 11960044) with 10% fetal bovine serum (Sigma-Aldrich F2442) was added, and the single-cell suspension was centrifuged at 400g for 6 min. Cell pellets were resuspended in 4°C DMEM with 10% FBS.
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