The largest database of trusted experimental protocols

Anti cd3 percp cy5

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Anti-CD3-PerCP-Cy5.5 is a fluorescent-labeled antibody that binds to the CD3 antigen, a cell surface marker expressed on T cells. It is designed for use in flow cytometry applications to identify and quantify T cell populations within a sample.

Automatically generated - may contain errors

18 protocols using anti cd3 percp cy5

1

Characterizing Tumor Immune Landscape

Check if the same lab product or an alternative is used in the 5 most similar protocols
The effect of IM@ZP on the content and proliferation of CD4  +  and CD8  +  immune cells in tumor was elucidated. On the 2, 4 and 15 day after treatment, the tumor was collected from mice and digested with 1500 U/mL collagenase (Sigma-Aldrich), 1000 U/mL hyaluronidase (Sigma-Aldrich) and DNase (Sigma-Aldrich) for 30 min at 37 °C. Tumor-infiltrating lymphocytes (TILs) were separated by filtration through a nylon mesh filter and then enriched. After washing with PBS containing 1% FBS, TILs were incubated with anti-CD3-PerCP Cy5.5, anti-CD8a-PE10 and anti-CD4-FITC antibodies (eBioscience) at 4 °C for 30 min. The content of immune cells was then detected by a flow cytometer. For Ki67 analysis, TILs were fixed, dissolved in FoxP3 buffer, and immunostained with anti-Ki67-FITC (eBioscience). The proliferation of TILs was analyzed by a flow cytometer. For cytokine detection, serum samples were collected and analyzed with a TNF-α ELISA kit. NK cells stained with anti-CD3-PerCP Cy5.5 (eBioscience) and anti-CD49b-FITC (eBioscience) antibodies were analyzed using a flow cytometer.
+ Open protocol
+ Expand
2

Multiparametric Flow Cytometry Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were stained with anti-CD3-PerCP Cy5.5 (eBioscience), anti-CD8-APC (BD Bioscience, San Jose, CA), anti-TLR2-PE (eBioscience), anti-TLR7-FITC (eBioscience), anti-lymphocyte activation gene-3 (LAG-3)-PerCP (BD Bioscience), and anti-CD279 (programmed death-1, PD-1)-FITC (BD Bioscience) following manufacturer’s instructions. Acquisitions were performed using CellQuest Pro Software by FACS Calibur (BD Bioscience), and data were analyzed using FlowJo V10 (TreeStar, Ashland, OR).
+ Open protocol
+ Expand
3

Intracellular Cytokine Staining for Th17 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were stimulated with phorbol 12-myristate 13-acetate (50 ng/ml) and ionomycin (1 μg/ml) in the presence of monensin (10 μg/ml) for 6 h. Cells were transferred to FACS tubes, and anti-CD3-PerCP Cy5.5 (eBioscience), anti-CD4-FITC (eBioscience), anti-CD25-APC (eBioscience), and anti-CD127-PE Cy7 (eBioscience) were added for a 20-min incubation in darkness at 4°C. Cells were fixed by 100 μl of Fixation & Permealization Medium A (Invitrogen, Grand Island, NY, U.S.A.) for a 15-min incubation, and then were resuspended in 100 μl of Fixation & Permealization Medium B (Invitrogen) containing anti-IL-17A-PE (eBioscience) for a 20-min incubation in darkness at room temperature. Cells were analyzed with FACS Calibur analyzer (BD Biosciences Immunocytometry Systems, San Jose, CA, U.S.A.). Acquisitions were performed using Cell Quest Pro Software (BD Biosciences), and data were analyzed using FlowJo Version 7.6.2 (Tree Star Inc., Ashland, OR, U.S.A.).
+ Open protocol
+ Expand
4

Single-Cell Isolation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
To isolate single cells, tissue samples were minced and incubated in DMEM containing collagenase, type 4 (2 mg/ml, Worthington Biochemical, LS004188) and dispase II (1 mg/ml, SIGMA, D4693) for 100 min, with shaking at 37 °C. The digestion was stopped with DMEM containing 10% FBS and filtered through a 70-μm cell filter (BD). The cells were then diluted 1:100 with Zombie Aqua™ dye in PBS, resuspended, and incubated for 15 min at RT in the dark. The single-cell suspension was incubated with Fc Block for 15 min at 4 °C. After washing, a mixture of cell surface antibodies was added, followed by incubation for an additional 30 min at 4 °C in the dark. We used the following antibodies: anti-CD45-FITC (eBioscience, California USA), anti-CD3-PerCP-Cy5.5 (eBioscience, California, USA), anti-CD11b-Pacific Blue (eBioscience, California, USA), anti-CD11c-PE-Cy7 (eBioscience, California, USA), anti-F4/80-PE (eBioscience, California, USA), and anti-ly6G-PerCP-Cy5.5 (eBioscience, California, USA). Cells were then fixed and permeabilized using the BD Cytofix/Cytoperm kit (BD Biosciences, San Jose, CA, USA) according to the manufacturer's instructions and detected using flow cytometry (FACSCalibur, BD, San Jose, CA).
+ Open protocol
+ Expand
5

Comprehensive Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
3x106 PBMCs were stained with Live/Dead Aqua (Life Technologies) and antibodies specific for the following human markers: anti-CD3-PercP-Cy5.5 (eBioscience), anti-CD20-Brillian Violet (BV)421 (eBioscience), anti-CD4-AlexaFluor700/PercP-Cy5.5 (eBioscience), anti-CD8-APC (eBioscience), anti-CD25-PE (BD), anti-CD14- AlexaFluor647 (BioLegend), anti-CD16-PE (eBioscience), anti-CXCR3-FITC (BioLegend), anti-CCR4-PECy-7 (BioLegend), anti-CCR6-BV605 (BioLegend) anti-CD161-BV421 (BioLegend), anti-CD45RA APCy-7 (BioLegend), anti-HLA-DR PECy7 (eBioscience), anti-CD80 CCR6-BV650 (BioLegend), CD86-FITC (Invitrogen) and CD163-APC/Cy7 (BioLegend) for 30min at 4°C. Cells were acquired on an LSR-Fortessa (BD) with consistent application settings, internal assay-control, fluorescence minus ones (FMO) control, isotype controls and/or biological control. Data was analysed using FlowJo (Tree Star, Inc. OR, USA) with gating strategies provided in the supplemental material.
+ Open protocol
+ Expand
6

Multiparametric Flow Cytometry of Placental Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
As described previously,25 (link) placental MNCs were incubated with fluorochrome-conjugated monoclonal antibodies for 40 minutes at 4°C. MNCs were pre-incubated with an anti-human BD Fc blocker (BD Pharmingen, San Diego, CA, USA), followed by staining with the live/dead marker anti-FVD-APC-Cy7 (eBioscience, San Diego, CA, USA). The antibodies used in this study were anti-CD3-PerCP-Cy5.5, anti-CD3-PE-Cy7, anti-CD4-AF700, anti-CD8-PE, anti-CD8-APC, anti-CD28-APC, anti-CD45RA-FITC, anti-CD45RO-PE-Cy7, anti-CD57-FITC, and fixable viability dye-APC-Cy7 (all supplied by eBioscience). MNCs were stimulated with phorbol-myristate acetate/ionomycin/brefeldin A/monensin for 5 hours. Cells were fixed and permeabilized using a Fixation/Permeabilization Buffer kit (eBioscience). The permeabilized cells were washed and resuspended in 1% formaldehyde and further stained for intracellular cytokines with anti-interferon gamma (IFN-γ)-PE-Cy7 and anti-IL-17A-APC. Multicolor flow cytometry was performed using a BD LSRFortessa flow cytometer (BD Biosciences, San Jose, CA, USA), and data were analyzed using FlowJo software (FlowJo, LLC, Ashland, OR, USA).
+ Open protocol
+ Expand
7

Isolation and Analysis of Intestinal Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Gastrointestinal biopsies were immediately transferred to a dithiothreitol/EDTA solution (Sigma, Hamburg, Germany, and Life Technologies, Darmstadt, Germany) and incubated for 15 min at 37 °C. The samples were finely sliced and digested in a collagenase A solution (Roche, Mannheim, Germany) for 1 h at 37 °C. The resulting cell suspension was passed through a 70-µm cell strainer (BD Biosciences, San Jose, CA, USA) and collected in a cRPMI-10 filled tube (Life Technologies, Darmstadt, Germany). After centrifugation, the pellet was resuspended in PBS (Life Technologies, Darmstadt, Germany) and cell viability was confirmed by staining an aliquot with 0.4 % trypan blue (Sigma, Hamburg, Germany) for microscopy.
For the quantification of CD3+CD4CD8+ T cells (CD8+ T cells) in lamina propria by flow cytometry, the following monoclonal antibodies were used: anti-CD3 PerCP-Cy5.5 (eBiosciences, USA) and anti-CD4 PE and anti-CD8 V500 (BD Biosciences, San Diego, CA, USA). Positive signals were defined by the use of isotype controls and the fluorochrome minus one (FMO) method.
+ Open protocol
+ Expand
8

Antibody Panel for ULBP4 Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-ULBP4 mAb (clone 709116) was purchased from R&D (Minneapolis, MN, USA). The ULBP4-specific mAb DUMO1 was previously described [32 (link)]. Anti-CD3-PerCP-Cy5.5 and fixable viability dye(FVD)-eFluor506 were from eBioscience (SanDiego, CA, USA), anti-CD19-APC-Cy7, anti-CD14-FITC, anti-NKp46-PE-Cy7, streptavidin-BV421 (SA-BV421) and goat-anti-mouse-IgG-PE (GaM-PE) were from Biolegend (SanDiego, CA, USA).
+ Open protocol
+ Expand
9

Tumor-Infiltrating Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
The number of MDSCs, NKT cells, and T cells subsets were detected using FCM. Tumor tissues were cut into small fragments, digested with 0.25% Trypsin for 30 min, and then filtered using 70 μm cell strainers. This single-cell suspension was then centrifuged at 1500 rpm for 5 min. The supernatant was discarded and the cell concentration was adjusted to 5 ×108/ml. The cell suspension was then washed using a mouse tumor-infiltrating lymphocyte separation medium (CW0049S; CWBIO, Jiangsu, China) and centrifuged at 1500 rpm for 15 min to obtain the lymphocytes. Lymphocytes with a concentration of 2 × 106/ml were collected and washed with PBS, followed by staining with anti-CD11b FTIC (No. 557397; BD, USA), anti-LY6G (No. 553989; BD, USA) and LY6C PE (No. 553126; BD, USA) (Gr-1), anti-CD3e FTIC (No. 46003 280; eBioscience, USA), anti-CD49a PE (No. 130107632; BD, USA), anti-CD4 FTIC (No. 11004282; eBioscience, USA), anti-CD8a PE (No. 11008182; eBioscience, USA), and anti-CD3 PerCP-CY 5.5 (No. 46 003280; eBioscience, USA), along with the appropriate isotype controls. The cells were analyzed using a flow cytometry FACSCalibur (BD, USA).
+ Open protocol
+ Expand
10

Comprehensive Murine Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse cells were preincubated with purified antimouse CD16/CD32, and human cells were incubated with FcR-blocking reagent (BD Biosciences). Isolated cells were stained with labeled antibodies in phosphate-buffered saline (PBS) with 1% bovine serum albumin (BSA). Dead cells were excluded based on staining with Live/Dead fixable dye (eBioscience). Forkhead box P3 (FOXP3) fixative solution (eBioscience) was used for FOXP3 staining. Prepared samples were analyzed using a flow cytometer (FACSCalibur or FACSAria; BD Biosciences). Data were analyzed using FlowJo software (TreeStar, Ashland, OR, USA). The following beads and antibodies were used: OneComp eBeads (eBioscience), antimouse CD11c Brilliant Violet 421 (BioLegend), antimouse CD11b PE-cy7 (eBioscience), GR1-APC (eBioscience), LY6C-APC-eFluor (eBioscience), F4/80 PE (eBioscience), NK-1.1 Percp-Cy5.5 (eBioscience), anti-CD45 FITC (eBioscience), Live/Dead Aqua (eBioscience), anti-CD4 eFluor 450 (eBioscience), anti-CD8 APC eFluor 780 (eBioscience), anti-CD3 Percp-Cy5.5 (eBioscience), anti-CD19 PE-CY7 (eBioscience), anti-CD25 APC (eBioscience), anti-Foxp3 PE (eBioscience), and anti-CD3 APC (BioLegend).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!