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Phosphate buffered saline pbs

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Phosphate-buffered saline (PBS) is a widely used buffer solution in biological research and laboratory procedures. It is an isotonic solution that maintains the physiological pH and osmolarity of biological samples. PBS is primarily used to wash, dilute, and suspend cells and tissues while preserving their integrity and function.

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21 protocols using phosphate buffered saline pbs

1

Nanostar Incubation Protocol for Cells

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Human colorectal carcinoma cell line HCT-116 (LGC Standards, Wesel, Germany), Swiss albino mouse macrophage cell line J774, and fibroblast cell line 3T3 (both from DSMZ, Braunschweig, Germany) were cultured in Dulbecco’s Modified Eagle Medium (DMEM; Biochrom, Berlin, Germany) supplemented with 10% fetal calf serum (FCS; Biochrom, Berlin, Germany) in a humidified environment at 37 °C with 5% CO2.
For SERS experiments, cells were grown on glass cover slips for 24 h prior to nanostar incubation. Then, a dilution of gold nanostars in DMEM-FCS of 1:10 (nanostar concentration ~5 × 10−12 M) was added and cells were incubated with the nanostars for different times. Prior to SERS measurements, the cells adhering to the glass cover slips were rinsed two times with phosphate-buffered saline (PBS, Biochrom, Berlin, Germany) to eliminate remaining culture medium and nanostars, and kept in PBS. For cryo soft X-ray nanotomography, cells were grown on Formvar-coated gold grids and incubated in a similar fashion as described for SERS experiments. After the stipulated incubation time, each grid was rinsed three times with PBS, the excess of buffer was removed with a filter paper, and the grids were plunge-frozen in liquid ethane.
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2

Multiomics Profiling of Neurodegenerative Diseases

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Venous blood and lumbar cerebrospinal fluid (CSF) samples (n = 117) were obtained from control individuals (n = 21) or patients with AD (n = 18), MCI (n = 7), HD (n = 46), depression (n = 11), FTLD (n = 5) and SCZ (n = 9) (Supplementary Table 1). PBMCs were isolated from EDTA-blood (20 ml) within 1 h of the blood draw through Biocoll (Biochrom GmbH, Berlin, Germany) density centrifugation at 1200 × g for 20 min at room temperature. The blood mononuclear cell fraction was recovered and washed twice in phosphate-buffered saline (PBS; Biochrom GmbH) at 300 × g for 10 min. For the isolation of CSF cells, CSF was centrifuged once at 300 × g for 10 min (4 °C). The cell pellet (PBMCs or CSF cells) was then fixed with fixation/stabilization buffer (SmartTube) and frozen at –80 °C until analysis by mass cytometry. PBMCs and CSF cells of a total of eleven CON, eight AD, seven MCI and twelve HD out of those 117 samples were used for CyTOF analysis.
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3

Adipogenic Differentiation Protocol

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PrestoBlue, fetal bovine serum (FBS), high glucose medium (4.5 g/L), and Dulbecco’s Modified Eagle’s medium (DMEM/F-12) were obtained from Life Technologies (Life Technologies, Carlsbad, CA, USA). Collagenase (type I) was purchased from Worthington Biochemical Corp. (Worthington Biochemical Corp., Lakewood, CA, USA). Paraformaldehyde (PFA), trypsin–EDTA, penicillin–streptomycin, and Tween®20 were obtained from Sigma (Sigma Aldrich, St. Louis, MO, USA). Acetic acid and crystal violet were bought from Roth (Carl Roth GmbH, Karlsruhe, Germany). Basic fibroblast growth factor (bFGF) was obtained from PeproTech (PeproTech GmbH, Hamburg, Germany). Isopropyl alcohol Oil Red O from Merck (Merck KGaA, Darmstadt, Germany) was used. phosphate buffered saline (PBS) was bought from Biochrom (Biochrom GmbH, Berlin, Germany). Rosiglitazone was from LKT Laboratories Inc. (LKT Laboratories Inc., St Paul, MN, USA). The study protocol was approved by the regional ethics committee (Ethics Committee of the RWTH Aachen University Faculty of Medicine, Aachen, Germany; EK163/07).
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4

Astrocyte Viability Assay via MTT

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After exposure of astrocytes in 96‐well plates to hyperoxia or normoxia, measurements of reduction in 3‐(4,5‐dimethylthiazol‐2‐yl)‐2,5‐diphenyl tetrazolium bromide (MTT; Sigma‐Aldrich) were performed to estimate cell viability. MTT is reduced by active mitochondria in vital cells and consequently, the amount of formazan is proportional to the number of living cells. MTT was prepared as a 5 mg/mL stock solution in phosphate‐buffered saline (PBS; Biochrom). A quantity of 50 μL of each well was collected and transferred to a corresponding microtiter plate for LDH release assay.
A quantity of 5 μL of MTT was added to each well (final concentration 0.5 mg/mL) for 3 h. The reaction was stopped by 50 μL 10% Sodium Dodecyl Sulfate (SDS; Sigma‐Aldrich). Absorbance was measured after incubation in a microplate reader (Bio‐Rad, Munich, Germany) at 570 nm, with a reference wavelength of 630 nm.
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5

Prussian Blue Staining of Nanoparticle Uptake

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To verify internalization of unlabeled nanoparticles, cells were stained with Prussian Blue and counterstained with nuclear fast red. Briefly, cells were fixed with 4% paraformaldehyde (PFA; AppliChem, Darmstadt, Germany) for 10 min at room temperature (RT) and washed twice with phosphate buffered saline (PBS; Biochrom, Berlin, Germany). Cells were incubated for 20 min in a mixture of 1% HCl (Carl Roth, Karlsruhe, Germany) and 2% potassium ferrocyanide (AppliChem) at equal volumes, washed twice with PBS and counterstained using 1% nuclear fast red (VWR International GmbH) in 5% aqueous aluminium sulfate (AppliChem) solution for 20 min. Cells were washed twice with PBS and once with distilled water. Finally, cells were embedded in mounting medium consisting of 12% poly(vinyl alcohol) (w/v; Sigma-Aldrich Chemie GmbH), 30% glycerol anhydrous (w/v; AppliChem), 0.53 mM phenol (Sigma-Aldrich Chemie GmbH) and 60 mM TRIS (pH 8.5; AppliChem). After polymerization of mounting medium, stained cells were investigated using the microscope Zeiss Axiovert 40 CFL (Carl Zeiss Microscopy GmbH, Jena, Germany).
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6

Cytoskeleton Visualization in Osteoblasts

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Actin staining with diamidino-2-phenylindole dihydrochloride (DAPI) counterstain was used to analyze changes in the structure of the cells’ cytoskeleton after particle exposure. For this purpose, the medium was removed, and the cells were washed with phosphate-buffered saline (PBS; biochrom, Berlin, Germany). The following steps were performed protected from light and at room temperature. Before staining, cells were fixed with 4% paraformaldehyde (PFA; pH: 7.0). After 10 min, cells were rinsed with PBS for 30 seconds. Then, the cell membrane was permeabilized by adding a permeabilization buffer containing 0.05% Triton-X (Merck KGaA, Darmstadt, Germany) for 5 min. Osteoblasts were rewashed with PBS for 30 seconds before 100 nM actin staining solution (100 nM Acti-Stain 488 Fluorescent Phalloidin, Cytoskeleton, Denver, CO, USA) was added to the cells for 30 min. After washing three times with PBS, osteoblasts were incubated with DAPI (Merck KGaA, Darmstadt, Germany) for 5 min to counterstain the nuclei of the cells. The staining solution was removed, and cells were washed with PBS and stored at 4°C until microscopic examination.
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7

Biofilm Preparation and Imaging

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Biofilms grown on poly-L-lysine-coated glass slides (BD biosciences) were mock treated or treated with 100 μM AI-2 in growth medium in 12-well-plates and carefully washed with 2 x 1 ml phosphate-buffered saline (PBS) (Biochrom) to remove medium and fixed for 1 h with 2% (v/v) glutaraldehyde (Sigma) in PBS at room temperature. Samples were washed twice with PBS to remove excess fixative and subsequently serially dehydrated by consecutive incubations in 1 ml of 25% (v/v) and 50% (v/v) ethanol-PBS, 75% (v/v) and 90% (v/v) ethanol-H2O, and 100% ethanol (2x), followed by 50% ethanol-hexamethyldisilazane (HMDS) and 100% HMDS (Sigma). The glass slides were removed from the 100% HMDS and air-dried overnight at room temperature. After overnight evaporation of HMDS, samples were placed on specimen mounts (Ted Pella Inc.) and biofilms coated with 80% Pt-20% Pd to 4 nm using a Cressington 208HR sputter coater at 40 mA prior to examination with a Phenom Table-top scanning electron microscope.
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8

Antioxidant and Anti-inflammatory Assays

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All the chemicals and reagents used were of analytical grade. 2, 2–Diphenyl-1-picrylhydrazyl (DPPH), and butylated hydroxytoluene (BHT) were purchased from Fluka, Germany. Acetic acid was purchased from Merck, Germany. 2,2′-Azino-bis (3-ethylbenzo-thiazoline-6-sulfonic acid) diammonium salt, 6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid, potassium persulfate, dimethyl sulfoxide, lipopolysaccharide from E.coli O55:B5 (LPS), phosphoric acid, N-(1-Naphthyl) ethylenediamine dihydrochloride, sulfanilamide,3-(4,5-Dimethyl-2-thiazolyl)-2,5-dipheyl-2H-tetrazolium bromide or thiazolyl blue tetrazolium bromide (MTT) were purchased from Sigma-Aldrich, USA. Dulbecco’s modified eagle medium (DMEM), Foetal bovine serum (FBS), Trypan blue stain 0.4% and Trypsin-EDTA were obtained from Gibco, USA. Hydrochloric acid and isopropanol were obtained from RCI Labscan, Thailand; Phosphate-buffered saline (PBS) was provided by Biochrom, Germany and mouse TNF-α and IL-6 ELISA kits were purchased from ImmunoTools, Germany.
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9

Physicochemical Characterization of Cationic Polymers

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CS (2,900 kDa, degree of substitution dS=2.87) was purchased from Acros Organics (Geel, Belgium). DEAE (500 kDa) and sodium DS (500 kDa, degree of substitution dS=2.93) was from Carl Roth GmbH & Co. KG (Karlsruhe, Germany). Fluorescein isothiocyanate isomer I (FITC)–DEAE–Dextran (DEAE–FITC) (150 kDa), FITC, PEI (750 kDa), PLL (58.9 kDa), and FITC-labeled PLL (PLL–FITC) (30–70 kDa) were purchased from Sigma-Aldrich (St Louis, MO, USA). The FITC-labeled PEI (PEI–FITC) was prepared from PEI (750 kDa) incubated with FITC, and in modification to the published protocol for PLL–FITC,25 water was used instead of Tris buffer. The anionic sodium poly(ethylenesulfonate) and cationic poly(diallyldimethylammonium chloride) PEL solution, which were used for particle charge detector (PCD) titration, were purchased from BTG Instruments GmbH (Herrsching, Germany).
Twenty-four-well tissue culture polystyrene (TCPS) plates were purchased from Nunc A.S. (Roskilde, Denmark). α-Minimal Essential Medium (α-MEM) with nucleosides, penicillin/streptomycin (10,000 U/10,000 µg/mL), L-alanyl-L-glutamine (200 mM), and phosphate buffered saline (PBS) without Ca2+ or Mg2+ were from Biochrom AG (Berlin, Germany). Fetal calf serum was purchased from BioWest (via Th. Geyer & Co. KG, Hamburg, Germany).
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10

Therapeutic Potential of AD-MSC Derived Extracellular Vesicles and sTRAIL in Pancreatic Cancer

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Male and female NOD.CB17-Prkdcscid/J mice (Charles River, Lecco, Italy) were kept in accordance with guidelines and under approved protocols by the Local Ethical Committee on Animal Experimentation and by the Italian Ministry of Health. Four groups of mice (n = 7/each) were established as follows: (1) sub-cutaneously flank injected (s.c.f.i) with 2 × 106 BxPC-3 (tumor only control group, CTL) in 200 μl Phosphate Buffered Saline (PBS, Biochrom, GmbH, Berlin, Germany); (2) s.c.f.i with 2 × 106 BxPC-3 and, as soon as an appreciable tumor burden appeared (6 days, 0.4–0.5 mm3), treated with multiple (n = 3) peri-tumoral injections of 106 AD-MSC EV (EV group) in 200 μl PBS every 10 days; (3) tumor injected as in (2) but treated with multiple (n = 3) peri-tumoral injections of 106 AD-MSC sTRAIL (sTRAIL group) in 200 μl PBS, (4) tumor injected as in (2) but treated with multiple (n = 3) tail intra-venous (i.v.) injections of rhTRAIL/Apo2 Ligand (Peprotech Inc.): 5 mg/Kg, (125 μg/mouse) in 200 μl PBS (rhTRAIL group). Parameters such as survival and weight were monitored. In all groups, weights were weekly recorded, tumor sizes were measured with a calliper and volumes were calculated as reported37 (link): volume = length × width2/2. After 38 days, animals were sacrificed and tissues were harvested for histology.
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