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Z gly pro amc

Manufactured by Bachem
Sourced in Switzerland

Z-Gly-Pro-AMC is an amino acid derivative that serves as a fluorogenic substrate for the detection and measurement of prolyl endopeptidase enzyme activity. It can be used in various biochemical and enzymatic assays.

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5 protocols using z gly pro amc

1

Tissue Homogenization and PREP Activity Assays

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For the preparation of tissue homogenates, 20 mg of N2‐pulverized rat brain were suspended in 250 μL PREP lysis buffer (0.1 mol/L Tris‐HCl pH 7.4, 1 mmol/L EDTA, 1% octyl glucoside, 50 μg/mL aprotinin, 5 mmol/L DTT). The samples were left on ice for 1 hour and centrifuged at 4°C at 12 000 g for 15 minutes. PREP activities were measured kinetically on the clarified supernatants using Z‐Gly‐Pro‐pNA (Bachem, Bubendorf, Switzerland) (250 μmol/L, 5% dimethyl sulfoxide [DMSO]) in 0.1 mol/L Tris‐HCl pH 7.4, 1 mmol/L EDTA, 3 mM DTT as described.38For determining PREP activity in rat plasma, the fluorescent substrate Z‐Gly‐Pro‐AMC (Bachem, Bubendorf, Switzerland; 250 μmol/L in 5% DMSO) was used. The activities were determined kinetically for 60 minutes at 37°C by measuring the velocity of AMC release (λex = 380 nm, λem = 460 nm). Fluorescence intensity was related to an AMC standard curve in the same buffer. One unit of activity was defined as the amount of enzyme catalyzing the conversion of 1 μmol of substrate in 1 minute under reaction conditions. All activities were normalized to the protein content in the lysates as determined in a Bradford assay.
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2

PREP Enzyme Kinetic Assay

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Human recombinant His-tagged PREP and KYP-2047 (UAMC-714) were kindly provided by Dr. Anne-Marie Lambeir (University of Antwerp, Belgium). Purified PREP was incubated with DMSO or a serine hydrolase inhibitor for 15 min at 37°C. Subsequently, 200 μM of z-Gly-Pro-AMC (Bachem), a fluorogenic substrate of PREP, was added. The reaction was performed in 50 mM phosphate buffer (pH 8) supplemented with 1 mM DTT. Fluorescence was measured with a FLUOstar Galaxy microplate reader (BMG Labtech) at excitation and emission wavelengths of 390 and 460 nm respectively.
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3

Recombinant Enzyme Storage and Validation

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Recombinant human enzymes [rhFAP (R&D Systems), rhPREP (R&D Systems) and rhDPPIV (Biolegend)] were stored in stocks at -70°C and diluted as required to be used at final concentration of 0.1 µg/ml. Enzymes were aliquoted upon receipt from the supplier and new stocks made from a fresh aliquot as required. Stocks were made at [4x] and control substrates of Z-Gly-Pro-AMC and H-Gly-Pro-AMC (Bachem) were used to confirm activity for each new stock of enzyme.
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4

Fluorometric Assay of FAP Activity

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Recombinant human FAP (R&D Systems, Minneapolis, MN, USA) was incubated with dye quenched (DQ) type I collagen or type IV collagen (100 μg/ml; Life Technologies, Carlsbad, CA, USA) in assay buffer according to manufacturer’s instructions. Proteolytic cleavage of each DQ substrate was assessed by measuring fluorescence in a Synergy-2 plate reader (Biotek, Winooski, VT, USA) using excitation/emission wavelengths of 485/528 nm. Baseline fluorescence was determined by incubation of DQ substrates in assay buffer in the absence of FAP. As a control for proteolytic activity, FAP was incubated with its synthetic substrate Z-Gly-Pro-AMC (Bachem, Bubendorf, Switzerland) according to manufacturer’s instructions.
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5

Inhibition of Tc80 Prolyl Oligopeptidase Activity

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Recombinant Tc80 (4 nM) was pre-incubated with 1/10 dilutions of sera from immunized mice. Then, residual prolyl oligopeptidase activity was determined in the presence of the dipeptide Z-Gly-Pro-AMC (Bachem), the fluorogenic substrate. The formation of the 7-amino-4-methyl coumarin (AMC) product was monitored by fluorometry (λexcitation = 355 nm and λemission = 460 nm). Reactions were carried out at 37°C in a final volume of 100 μl reaction buffer (25 mM Tris, 250 mM NaCl, 2.5 mM DTT, pH 7.5) in a 96-well black plate (Costar Corning). Fluorescence measurements were made on a PerkinElmer Victor3 fluorimeter.
The AMC formation was recorded over time in relative fluorescence units (RFU) and the slope (ΔRFU/Δtime) from the linear region of the curve was used for the calculation of initial reaction velocity (Vi).
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