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14 protocols using ab181114

1

Placental Tissue Histology and Immunohistochemistry

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Placental tissues embedded in wax were sliced at a thickness of 5 μm. For the hematoxylin and eosin (H&E) assay, the slides were stained with hematoxylin for 5 min and eosin Y for 30 s (C0105S, Beyotime, Beijing, China). Images were captured using an Olympus DP71 microscope. For immunohistochemistry assay, antigen retrieval was carried out in citrate buffer pH 6.0 (P0083, Beyotime, Shanghai, China) using a pressure cooker for 3 min, followed by blocking endogenous peroxidases using 0.3% H2O2 for 15 min. After blocking 20 min by blocking buffer (P0260, Beyotime, Shanghai, China), the slides were incubated overnight at 4°C with an anti-CPT2 antibody (1:150, ab181114, Abcam, Cambridge, UK), anti-CPT1b antibody (1:150, 22170-1-AP, Proteintech, Wuhan, China). On the next day, the slides were washed and then incubated with a secondary antibody (PV9001, Zhongshan Gold Bridge Biotechnology Co, Beijing, China) for 20 min at room temperature. The slides were incubated with DAB (ZLI9018, Zhongshan Gold Bridge Biotechnology Co, Beijing, China) to detect side-specific antigen-antibody binding, followed by staining with hematoxylin. Then, the slides were dehydrated and sealed with neutral gum. Images were captured using an Olympus DP71 microscope. Five random views per tissue section were used to quantify the mean IOD (IOD/area) using Image-Pro Plus 6.0.
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2

Immunohistochemical Analysis of EOC

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IHC assay was performed to determine the protein expression of NKX2–8 (Abcam, ab125040), CPT1A (Abcam, ab128568) and CPT2 (Abcam, ab181114) in 144 EOC samples. The detailed processes of IHC assay were carried out according to previously published paper [22 (link)]. Axio Imager.Z2 system (Carl Zeiss Co. Ltd., Jena, Germany) was used to capture the immunohistochemistry images.
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3

Immunohistochemistry of Kidney Proteins

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Kidney slices were fixed in alcohol–formalin–acetic acid, dehydrated with ethanol and xylene, embedded in paraffin, and cut into 3 μm sections. Samples were then deparaffinized, rehydrated, and heated for 20 minutes at 97°C in citrate buffer. Endogenous peroxidase was inactivated by incubation for 10 minutes at room temperature in 0.3% H2O2. Sections were incubated with PBS containing 1:50 anti-Hspa5 (catalog sc-1050, Santa Cruz Biotechnology) and anti-Cpt2 (catalog ab181114, Abcam). Next, sections were incubated with anti-rabbit or anti-goat antibodies conjugated with peroxidase-labeled polymer [Dako, Agilent Technologies, EnVision+ Dual Link System-HRP (DAB+) catalog K4065], then visualized with a peroxidase kit (Dako). Finally, the tissue sections were counterstained with hematoxylin.
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4

Protein Extraction and Western Blot Analysis

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The extraction of the total protein was carried out from the targeted cells by employing RIPA buffer which contains protease inhibitors and BCA protein assay was used to measure the protein concentrations of supernatants. SDS-PAGE was carried out with a total of 30 μg protein. The earlier researches also highlighted the procedure [21 (link)]. Anti-CPT2 (1:1000, ab181114, Abcam, UK) and anti-GAPDH (1:5000, 60,004–1-Ig, proteintech, China) were used as primary antibodies. The secondary antibodies used in this study were as follows: Anti-Mouse IgG(H + L) (1:5000, SA00001–1, proteintech, China) and Anti-Rabbit IgG (H + L) (1:5000, SA00001–2, proteintech, China).
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5

Colorectal Cancer Cell Metabolism Profiling

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Protein lysates of the human colorectal cancer cell lines were used for immunoblotting analysis. FFAR2-shRNA constructs to knockdown FFAR2 were purchased from OriGene Technologies, Inc. (Rockville, MD, USA), as indicated previously [23 (link)]. Antibodies to carnitine palmitoyltransferase 2 (CTP2) (ab181114), acyl-CoA dehydrogenase, long-chain (ACADL) (ab152160), acyl-CoA dehydrogenase, C-2 to C-3 short chain (ACADS) (ab156571), and hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase, alpha subunit (HADHA) (ab203114) were purchased from Abcam (Cambridge, MA, USA) and were used to identify their respective proteins. Antibody to β-actin (691001) was purchased from MP Biomedical (Santa Ana, CA, USA) and was used as a loading control.
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6

Protein Expression Analysis in Liver Tissue

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Liver was lysed in RIPA buffer supplemented with Halt Protease and Phosphatase Inhibitor Cocktail (Thermo-Fisher, Waltham, MA) and 1 mM PMSF. Protein concentrations were determined using Pierce BCA Protein Assay Kit (Pierce, Rockford, IL). Twenty-five micrograms of protein per lane were loaded onto a 4–12% Criterion TGX Precast Gel (Bio-Rad, Hercules, CA) then transferred to PVDF membranes using a Trans-Blot Turbo Transfer System (Bio-Rad, Hercules, CA). Membranes were blocked in 5% non-fat milk followed by overnight incubation with primary antibody at 4 °C. Primary antibodies used are as follows: anti-ACADM (55210, Proteintech, Rosemont, IL) and anti-CPT2 (ab181114, Abcam, Cambridge, MA). Following primary antibody incubation, the blots were washed and incubated with an anti-rabbit IgG HRP-conjugated secondary antibody (#7074S, Cell Signaling Technology, Danvers, MA). Blots were stripped with Restore Western Blotting Stripping Buffer (Thermo-Fisher, Waltham, MA) and re-probed with anti-ACTB for normalization (ab8227, Abcam, Cambridge, MA). Blot imaging was performed on a ChemiDoc™ MP System (Bio-Rad, Hercules, CA) after exposing blot to Clarity Western ECL Blotting Substrate (Bio-Rad, Hercules, CA).
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7

Mitochondrial Isolation and Immunoblotting

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Mitochondria-enriched fraction was prepared as described previously10 (link). BMDMs were cultured in a six-well plate (1.0 × 106 cells per well) and the cells were washed with PBS and re-suspended in 100 ml of mitochondrial isolation buffer (70 mM Tris, 0.25 M sucrose and 1 mM EDTA, pH 7.4), 100 ml of MES buffer (19.8 mM EDTA, 0.25 M D-mannitol and 19.8 mM MES, pH 7.4) and 4 ml of 10 mg ml−1 digitonin. After 10 min of incubation, the cells were scraped and collected from three wells and centrifuged at 900g for 2 min. The supernatant was collected and centrifuged at 13,000g for 5 min to pellet the mitochondria-enriched fraction. The pellet was washed in PBS and centrifuged at 16,000g for 5 min. This fraction was then directly re-suspended in 30 ml of 1× loading buffer and boiled. The samples were then loaded into 4–20% Mini-PROTEAN TGX Precast Protein Gel (Bio-Rad), and transferred to Trans-Blot Turbo Nitrocellulose Transfer Pack (Bio-Rad). Anti-CPT2 (1:1,000 dilution; ab181114; Abcam) and anti-COX4 (1:2,000 dilution; A21348; Thermo Scientific) were used as primary antibodies and the blots were acquired and analyzed by Odyssey CLx imager (LI-COR).
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8

Comprehensive Immunoblotting of Mitochondrial and Cellular Markers

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Immunoblotting was performed with anti-CPT1A (1/1,000) (ab128568; Abcam), anti-CPT1B (1/1,000) (ab134988; Abcam), anti-CPT1C (1/1,000) (ab87498; Abcam), anti-CTP2 (1/1,000) (ab181114; Abcam), anti-heat-shock protein-60 (HSP60) (1/1,000) (ab46798; Abcam), anti-TOMM20 (1/1,000) (ab56783; Abcam), anti-NDUFS1 (1/500) (sc-50132; Santa Cruz Biotechnology), anti-UQCRC2 (1/1,000) (ab14745; Abcam), anti-GFAP (1/500) (G6171; Sigma), anti-NDUFB8 (1/1,000) (ab110242; Abcam), anti-NDUFA9 (1/1,000) (ab14713; Abcam), anti-SDHA (1/1,000) (ab14715; Abcam), anti-MTCO1 (1/1,000) (ab14705; Abcam), anti-COX IV (1/1,000) (ab16056; Abcam), anti-Iba1 (1/1,000) (019-19741; Wako), anti-MAP2 (1/1,000) (ab32454; Abcam), anti-OLIG2 (1/1,000) (ab109186; Abcam), anti-PDHA1 (1/1,000) (no. 3205; Cell Signaling), anti-phosphoSer293-PDHA1 (1/1,000) (no. 31866; Cell Signalling), anti-β-Tubulin III (1/300) (T2200; Sigma) and anti-β-actin (1/30,000) (A5441; Sigma).
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9

Immunohistochemical Staining of HRD1, CPT2, and Ki-67

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Standard immunohistochemical (IHC) staining procedures were performed according to the instructions of the IHC Kit (KIHC‐5; ProteinTech, Wuhan, China). HRD1 antibody (ab118483 1 : 100; Abcam), CPT2 antibody (ab181114 1 : 100; Abcam), and Ki‐67 antibody (27309‐1‐AP 1 : 20000; ProteinTech) were used as the primary antibodies. EDTA and citrate solution were used for antigen retrieval depending on the antibody instructions. The H‐score was used to assess the staining intensity.
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10

Western Blot Analysis of Apoptosis Regulators

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Western blotting analysis were performed in accordance with standard procedures. The antibodies used in this study were NKX2–8 (1:500, Abcam, ab125040), CPT1A (1:1000, Abcam, ab128568), CPT2 (1:1000, Abcam, ab181114), Sin3A (1:1000, Abcam, ab3479), SAP18 (1:1000, Abcam, ab31748), HDAC1 (1:2000, Abcam, ab7028), p-AKT1 (phospho S473) (1:500, Abcam, ab81283), p-mTOR (phospho S2448) (1:1000, Abcam, ab109268), p-S6K1 (phospho T389) (1:1000, Abcam, ab60948), p-Bad (phospho S112) (1:2000, Abcam, ab129192), activated caspase-3 (1:500, Abcam, ab2302) and Cytochrome C (5 μg/ml, Abcam, ab13575). Anti-α-Tubulin antibody (1:3000, Abcam, ab7291) was used as a loading control.
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