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Anti caspase3

Manufactured by R&D Systems
Sourced in United States

Anti-Caspase3 is a laboratory product that detects the presence and activity of the Caspase-3 enzyme. Caspase-3 is a critical executioner of apoptosis, or programmed cell death. The Anti-Caspase3 product can be used to measure Caspase-3 levels in various biological samples, providing researchers with information about the cell death processes occurring in their experiments.

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8 protocols using anti caspase3

1

Immunohistochemical Analyses of Intestinal Tissues

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Intestinal tissue was fixed, processed and haematoxylin and eosin stained as described previously [41 (link)]. The following antibodies were used for immunohistochemistry: anti-Cd4(1:100; eBioscience), anti-Cd8 (1:200; eBioscience) anti-Caspase 3 (1:750; R&D systems), anti-β-catenin (1/50; Becton Dickinson), anti-Ki67 (1:200; Vector Labs) and mouse anti-BrdU (1:100; Becton Dickinson). Staining for Treg cells was performed on a Ventana (Roche) Discovery Ultra Autostainer (Serial number 313108) using Antigen Retrieval CC1 buffer (Ventana) for 48 minutes at 95° C and an Anti-mouse/rat FoxP3 (1/25; eBioscience) in discovery antibody diluent (Roche).
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2

Western Blot Protein Analysis

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Western blotting analysis was performed using standard protocols as published elsewhere [10 (link), 14 (link)]. Briefly, protein lysates were extracted from the cells (1 × 107 cells) using a Qproteome Mammalian Protein Prep Kit (Qiagen), and the lysates were applied to 7.5% sodium dodecyl sulfate-polyacrylamide gel electrophoresis gels for separation. Proteins were then transferred onto Immobilon-P membranes (Millipore, Billerica, MA, USA). The membranes were probed with primary and secondary antibodies using standard techniques. Anti-FPGS (cat. no. ab184564; Abcam, Cambridge, UK), anti-DHFR (cat. no. 872442; R&D Systems, Minneapolis, MN, USA), anti-caspase 3 (cat. no. 9665; Cell Signaling Technology, Massachusetts, USA), anti-PARP (cat. no. 9542; Cell Signaling Technology), anti-cleaved PARP (cat. no. 9541; Cell Signaling Technology), and anti-β-actin (cat. no. A2066l Sigma-Aldrich Japan) antibodies were used as primary antibodies, and anti-rabbit polyclonal antibodies (cat. no. 7074; Cell Signaling Technology, Tokyo, Japan) were used as secondary antibodies. Protein detection and quantification were performed using Amersham ECL Prime Western Blotting Detection Reagent and an ImageQuant LAS4000mini system (GE Healthcare Life Sciences, Little Chalfont, UK).
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3

Lymph Node Imaging in Melanoma PDT

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1.5x106 B16F10 melanoma cells were injected subcutaneously into the footpad of 8-week-old C57BL/6 mice. BL-PDT was performed at day 21 after implantation by injecting 12 µg Ce6, 30 pmol Luc-QD conjugates and 70 nmol CTZ sequentially with 10 min intervals into the peritumoral dorsum of the foot. Two days after the treatment, the popliteal LNs of the mouse were fixed with 1% PFA in PBS and dehydrated with 20% sucrose. After rinse with PBS, resected LNs were embedded in tissue freezing medium (Leica). Mid-sectioned LNs were incubated with blocking solution containing goat serum (Jackson ImmunoResearch). The sectioned tissues were incubated overnight with one of more of the following primary antibodies (1:200): anti-vascular endothelial growth factor receptor 3, goat polyclonal (VEGFR3: R&D); anti-CD31, hamster monoclonal (Millipore); anti-Melan-A, mouse polyclonal (Abcam); and anti-caspase-3, rabbit polyclonal (R&D). After several rinse with PBS, the sectioned tissues were incubated for 2 h with one or more of the following secondary antibodies (1:1000): anti-goat cy3 (invitrogen), anti-hamster cy5 (Jackson ImmunoResearch), anti-mouse cy3 (Jackson ImmunoResearch), and anti-rabbit FITC (Jackson ImmunoResearch).
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4

Apoptosis Pathway Protein Analysis by Western Blot

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Western blot was performed as described previously [30 (link)]. Antibody concentrations of primary antibodies were used as follows: Anti-DR4 (1:1000; Pro Sci, Fort Collins, CO, USA), anti-caspase-8 (1:1000; Enzo), anti-CDK9, anti-PARP, anti-FADD, anti-Bax, anti-Bak, anti-Mcl-1, anti-Bcl-xL, anti-Bcl-2, anti-cFLIP (AdipoGen, San Diego, CA, USA), anti-cIAP1, anti-cIAP2, anti-XIAP, anti-survivin (1:1000; Cell Signaling Technology), anti-caspase-9 (1:500; Cell Signaling Technology), anti-DR5, anti-Bid (1:2000; Cell Signaling Technology), anti-β-actin (1:5000; Sigma-Aldrich), anti-caspase-3 (1:2000; R&D, Minneapolis, MN, USA), anti-RNA polymerase II total (RNA Pol II) (1:2000), anti-pSer2 RNA Pol II (1:5000; Covance, Princeton, NJ, USA). Immuno-complexes were detected using peroxidase-conjugated anti-mouse IgG, anti-rabbit IgG, and anti-goat IgG (1:5000; Cell Signaling Technology) followed by chemiluminescence detection (Pierce ECL Western Blotting Solution; Thermo Fisher Scientific).
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5

Larval Gut Immunostaining for Apoptosis

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The larval gut immunostaining was performed as described by D’Souza et al. [29 (link)]. The first instar larvae were transferred to control, and A.L. extract (100.0 µg/mL)-treated food. After 96 h, the guts of the larvae were dissected in 1X PBS, then fixed for 20 min at room temperature with a 4% paraformaldehyde (PFA) solution (made in 1XPBS). Following fixation, the guts were washed three times in 1XPBS for five minutes each. After washing, the gut tissues were blocked with 1% bovine serum albumin (BSA) for an hour. The larval guts were then incubated in primary antibody, anti-caspase 3 (1:500, #9661S, R&D systems), in 1% BSA at 4 °C overnight. The guts were then washed with 1XPBST (0.3 percent Triton X-100 in 1XPBS) and incubated in secondary antibody (#A11030; Goat anti-mouse Alexa flourTM 546; 1:500 dilution) for 3 h. The excess secondary antibody was washed three times with 1XPBST, followed by DAPI staining for 30 min. The guts were then mounted on a slide and analyzed using Olympus BX53 fluorescent microscope. At least three independent biological replicates per group were used to perform the experiment.
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6

Immunofluorescence Staining of Tumor Samples

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For immunofluorescence staining, the tumor samples were fixed in 1% PFA, dehydrated overnight in 20% sucrose solution, and frozen (Leica). The frozen blocks were sectioned into 50 μm-thick slices, which were permeabilized with 0.3% PBS-T (Triton X-100 in PBS), and blocked with 5% normal goat serum in 0.1% PBS-T for 30 min at room temperature. Next, the samples were incubated overnight with the following primary antibodies: Anti-PD-L1 (rabbit, clone 28–8, Abcam), anti-CD8 (rat, clone 53–6.7, BD Pharmingen), anti-CD31 (hamster, clone 2H8, Millipore; rabbit, Abcam), anti-L-Kyn (mouse, clone 3D4-F2, ImmuSmol), anti-Granzyme B (rat, clone NGZB, Invitrogen), anti-Ki67 (rabbit, Abcam), or anti-Caspase3 (rabbit, R&D Systems). After several washes, the samples were incubated for 2 h at room temperature with the following secondary antibodies: FITC- or Cy3-conjugated anti-rabbit IgG (Jackson ImmunoResearch), FITC- or Cy3-conjugated anti-rat IgG (Jackson ImmunoResearch), Cy3-conjugated anti-hamster IgG (Jackson ImmunoResearch), or FITC-conjugated anti-mouse IgG (Jackson ImmunoResearch). Cell nuclei were counterstained with 4ʹ,6-diamidino-2-phenylindole (DAPI, Invitrogen). Finally, samples were mounted with fluorescent mounting medium (DAKO), and images were acquired using a Zeiss LSM 880 microscope (Carl Zeiss).
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7

Immunohistochemistry and Proximity Ligation Assay

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For immunohistochemistry experiments, explants were fixed with 4% PFA for 10 mins at RT, followed by permeabilization with 0.1% NP40 for 30 mins at 37°C. Next, the cells were blocked with 1% BSA in PBS for 30 mins at 37°C, prior to incubation with the primary antibody for 1h at 37°C. Primary antibodies were prepared in blocking solution, and were used in the following dilutions: mouse anti-E-cadherin antibody (BD Biosciences) (1:200), mouse anti-Paxillin antibody (BD Biosciences) (1:200), and rabbit anti-Active Yap1 (Abcam)(1:200), anti-pH3(S10) (Abcam, 1:200), anti-Caspase3 (R&D Systems, 1:200). Following primary antibody incubation, the explants were washed 4X times in PBS for 10 mins and incubated in a secondary antibody cocktail for 30 mins at 37°C. Finally, cells were washed 3X times in PBS and stained with DAPI or Phalloidin for 20 mins at RT. Post antibody staining, imaging was performed using Andor/Olympus Spinning Disk Confocal microscope at BRC facility, Cornell University.For Proximity Ligation Assay (PLA), explants were fixed and permeabilized as described above.The primary antibodies used were: Mouse Anti-YAP1 (DSHB) (1:5) and Rabbit Anti-TEAD1 (Abcam) (1:200). Following primary antibody incubation, the remaining steps of PLA were performed using reagents from the Duolink PLA detection kit (Sigma Aldrich, DUO92101) according to the manufacturer’s protocol.
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8

Immunofluorescence Staining of Tumor Samples

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For immuno uorescence staining, the tumor samples were xed in 1% PFA, dehydrated overnight in 20% sucrose solution, and frozen (Leica). The frozen blocks were sectioned into 50 μm-thick slices, which were permeabilized with 0.3% PBS-T (Triton X-100 in PBS), and blocked with 5% normal goat serum in 0.1% PBS-T for 30 min at room temperature. Next, the samples were incubated overnight with the following primary antibodies: Anti-PD-L1 (rabbit, clone 28-8, Abcam), anti-CD8 (rat, clone 53-6.7, BD Pharmingen), anti-CD31 (hamster, clone 2H8, Millipore; rabbit, Abcam), anti-L-Kyn (mouse, clone 3D4-F2, ImmuSmol), anti-Granzyme B (rat, clone NGZB, Invitrogen), anti-Ki67 (rabbit, Abcam), or anti-Caspase3 (rabbit, R&D Systems). After several washes, the samples were incubated for 2 h at room temperature with the following secondary antibodies: FITC-or Cy3-conjugated anti-rabbit IgG (Jackson ImmunoResearch), FITC-or Cy3-conjugated anti-rat IgG (Jackson ImmunoResearch), Cy3-conjugated anti-hamster IgG (Jackson ImmunoResearch), or FITC-conjugated anti-mouse IgG (Jackson ImmunoResearch). Cell nuclei were counterstained with 4',6-diamidino-2-phenylindole (DAPI, Invitrogen). Finally, samples were mounted with uorescent mounting medium (DAKO), and images were acquired using a Zeiss LSM 880 microscope (Carl Zeiss).
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