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5 protocols using clarity max substrate

1

Western Blot Analysis of Myc-Tagged Proteins

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Cells were re-suspended in NuPAGE sample buffer supplemented with 50 mM of dithiothreitol (DTT) and loaded on 4–12% NuPAGE Bis-Tris Protein Gels and electrophoresed at 180 V for 1 h. Gels were transferred to Nitrocellulose membranes using wet transfer system XCell II Blot Module (Invitrogen) at a constant amperage of 350 mA for 2 h. Membranes were blocked with 5% skimmed milk in Tris Buffered saline-Tween for 1 h before incubation with primary antibody anti-myc tag monoclonal clone 4A6 (Millipore) diluted to a final concentration of 200 ng mL−1 in 3% skimmed milk in TBST for 1 h at room temperature. After washing membranes proceeded to incubation with secondary antibody anti-mouse IgG (H + L) conjugated to HRP (Molecular Probes) at 300 ng mL−1 in 3% skimmed milk in TBST for 1 h at room temperature. Membranes were washed, incubated with Clarity Max substrate (BioRad) and developed in ChemiDoc MP (BioRad).
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2

Oxytocin Receptor Quantification in Adipose Tissue

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OXTR protein expression was examined in adipose tissue membrane fractions. Adipose tissue was homogenized in ice-cold lysis buffer (15 mM KCl, 1.5 mM MgCl2, 10 mM HEPES, 1 mM DTT, protease inhibitors), centrifuged at 1000 x g for 5 min at 4 °C, and OXTR enriched membrane fractions in the supernatant were isolated by centrifugation at 100,000 g × 60 min at 4 °C. The membrane pellet was solubilized in SDS lysis buffer (50 mM Tris, pH 8.6, 1% SDS). Protein was measured with BCA Protein Assay (Pierce, Rockford, IL, USA). OXTR protein expression was evaluated using previously described methods and using a specific polyclonal anti-rabbit OXTR (cat. no. ab181077; Abcam, Cambridge, MA, USA) validated against tissues from OXTR knockout mice [10 (link)]. Immunoreactive bands were detected with appropriate peroxidase conjugated secondary antibody for 1 h and then visualized with chemiluminescence (Clarity Max substrate, Bio-Rad Laboratories, Hercules, CA, USA). To normalize for protein loading, the membranes were stripped and re-probed with chicken anti-actin antibody (Cat. no. SAB3500350; Sigma, St. Louis, MO) or sodium/potassium ATPase (Cat. no. ab76020; Abcam, Cambridge, MA, USA).
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3

Quantitative Western Blot Analysis

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Protein concentration was measured by the Bicinchoninic acid (BCA) assay. EV lysates (approximately 3 µg per sample) and cell lysates (approximately 10 µg per sample) were mixed with Laemmli buffer and heated at 95 °C. Samples were run on a 4–20% Tris/glycine gel (Invitrogen, Carlsbad, CA, USA) and then transferred to a PVDF membrane overnight. Blocked membranes were incubated with the appropriate primary antibody overnight at 4 °C. The primary antibodies used included α-CD63, α-CD81, α-CD9, α-GAPDH, α-Caspase 3, α-Cyclin A, α-Cyclin D1, α-Cyclin E, α-N-cadherin, α-E-cadherin, α-CD142, α-VEGF, α-DNA Polymerase β, α-p-AKT, and α-Akt, and α-Actin. See Table 1 below for primary antibody catalog information. After incubation with the appropriate secondary antibody, membranes were developed with Clarity™ or Clarity Max™ Substrate (Bio-Rad, Hercules, CA, USA), and images were taken with the ChemiDoc™ Imaging System (Bio-Rad). Images of full-length blots are included in Figure S1.
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4

Western Blot Analysis of SLC5A3

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From three patients (IBM1-3), sufficient muscle material was available to prepare protein samples, which was carried out using a commercial extraction kit (Thermo Fisher Scientific, Waltham, MA, USA). A positive control sample was prepared from a human kidney biopsy. Proteins were separated on a 10% bis-tris gel and blotted onto a nitrocellulose membrane (Thermo Fisher Scientific). The membrane was incubated simultaneously with primary antibodies directed against SLC5A3 and glyceraldehyde 3-phosphate dehydrogenase (GAPDH), in tris-buffered saline with 2% milk added. Chemiluminescence was generated after incubating for 1h with 1µg/mL peroxidase-labeled rabbit anti-mouse by adding the Clarity Max substrate (Biorad, Hercules, CA, USA), visualized with the Chemidoc Imaging System, and analyzed with Image Lab 6.0 software (Biorad). Quantification was done using GeneTools software (Syngene, Cambridge, UK), automatically detecting and measuring raw volume of protein bands. SLC5A3 levels were calculated as the raw volume relative to the GAPDH content of the sample.
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5

Western Blot Analysis of PNT1 and OPB Proteins

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1 x 10 7 cells lysed in NuPAGE sample buffer (supplemented with β-mercaptoethanol) were loaded on to a 4-12% NuPAGE Bis Tris Gel and run at 150V in MOPS buffer. The gels were transferred onto a PVDF membrane using the wet transfer system XCell II Blot Module of Invitrogen at a constant voltage of 30V for 90 min. The blot was blocked with 5% Skimmed Milk (Sigma) for 1 h. Primary antibodies were added at the following concentrations: rabbit polyclonal PNT1 antibody-1:500 overnight at 4°C, sheep polyclonal OPB antibody-1:20,000 1 h at room temperature. After 3 washes in 1X TBST, goat anti rabbit HRP (Promega) and donkey anti-sheep HRP (Santa Cruz) were added at 1;5000 dilution for 1 h. The blots were washed with 1X TBST and overlayed with Clarity Max substrate (BioRad). The blots were developed in a myECL Imager (Thermo Fisher Scientific).
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