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5 protocols using cerdulatinib

1

RSV-EV Modulation of Airway Cells

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A549 cells were placed in 24-well plates and grown overnight. The next day the cell media was removed, cells were washed with PBS, and fresh media containing equal amounts of mock- or RSV- EVs (15 µg/well) was added. Mock- or RSV- EVs were isolated and purified using a two-step EV purification method, Exoquick-TC followed by CD63 immuno-EV purification. The cells were allowed to incubate in the presence of EVs for 24 hours. Negative control wells were included that consisted of mock or RSV-infected cells not treated with EVs. For inhibition of IFN signaling, cells were pretreated with 5 μM of Cerdulatinib (Selleckchem, TX) 1 h prior to and throughout the EV treatment. At the end of the EV treatment, media were removed, and cells were infected with RSV for 24h. After infection, media were collected from each well and stored at -80°C for further analyses.
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2

Culturing Human Pancreatic Beta Cells and Islets

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The human beta cell line EndoC-βH1 (kindly provided by Dr. R. Scharfmann, University of Paris, France) was cultured in Matrigel-fibronectin-coated plates as described [4 (link)]. These cells are free from mycoplasma infection, as evaluated by MycoAlert Mycoplasma Detection kit (Lonza, Basel, Switzerland).
Isolation of human islets from 3 non-diabetic organ donors (ESM Table 1) was performed in accordance with the local Ethical Committee in Pisa, Italy. After arrival in Brussels, islets were dispersed and cultured as in [4 (link)]. All experiments shown with EndoC-βH1 cells or human islet cells (indicated as “n” in the figures) refer to independent biological data (i.e using EndoC-βH1 cells from different passages or human islets from different donors). Where indicated, cells were treated with human IFNα (PeproTech Inc., Rocky Hill, NJ) 20 or 1000 U/ml [4 (link)]. Cells were treated with ruxolitinib (kindly provided by Calibr, CA, USA), cerdulatinib (Selleckchem, Germany), Bayer-18 (Synkinase, UK), or cycloheximide (Sigma-Aldrich, Germany) as indicated.
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3

Respiratory Syncytial Virus Infection in Alveolar Epithelial Cells

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A549 cells, a human alveolar type II like epithelial cell line (American Type Culture Collection, Manassas, VA) and small alveolar epithelial cells (SAECs)(Lonza Inc., San Diego, CA), normal human AECs derived from terminal bronchioli, were grown according to the manufacturer’s instructions. RSV infection in A549 cells were done in F12K medium containing 2% FBS. When SAECs were used for RSV infection, they were changed to basal medium, not supplemented with growth factors, 6 h before and throughout the length of the experiment. At 90 to 95% confluence, cell monolayers were infected with RSV at multiplicity of infection (MOI) of 3. An equivalent amount of 30% sucrose solution was added to uninfected A549 and SAECs, as a control.
For Anacardic acid (10 μM) (172050, EMD Millipore, MA) and Cerdulatinib (5 μM) (PRT062070, Selleckchem, TX) experiments, cells were pretreated with the compounds for 1 h and then infected in their presence for the duration of the experiment. Equal amounts of diluent were added to cells uninfected and infected as control. Total number of cells and cell viability, following various treatments, were measured by trypan blue exclusion. There was no significant change in cell viability with all compounds tested. There was no effect of Anacardic acid on viral replication, while there was a trend in increased viral replication in cells treated with Cerdulatinib.
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4

SYK Inhibitors in Cell Culture

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The SYK inhibitors used in all experiments were fostamatinib disodium (MedChemExpress, (Monmouth Junction, NJ, USA)), entospletinib (MedChemExpress, (Monmouth Junction, NJ, USA)), cerdulatinib (Selleckchem, Houston, TX, USA), TAK-659 (Selleckchem, Houston, TX, USA), and RO9021 (Selleckchem, Houston, TX, USA), and their main pharmacological properties are listed in Table 4. A stock solution was prepared according to the manufacturer’s instructions before being aliquoted in RPMI-1640 or StemSpan SFEMTM medium (Stem Cell Technologies, Vancouver, BC, Canada) and being stored at −80 °C. Aliquots were thawed only once before being used in experiments.
StemSpan SFEMTM medium (Stemcell Technologies, Vancouver, BC, Canada) supplemented with exogenous G-CSF, stem cell factor (SCF), and FLT3 ligand (FLT3-L) (all from Peprotech, London, UK) was used as a cell culture medium in all experiments. Cytokines were used at a final concentration of 20 ng/mL.
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5

Cell Proliferation Analysis Using CCK-8

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The Cell Counting Kit-8 was used for cell proliferation analysis (APExBIO, USA). RAB27A overexpression stable cells and cells transfected with target siRNA or the corresponding negative controls were seeded into 96-well plates grown for 24, 48, and 72 h. Cell viability was determined according to the kit manufacturer’s instructions. Clone formation assay was used to detect cell proliferation. Briefly, the cells were diluted using a complete culture medium, and 3 × 103 cells were seeded into 60-mm plates. After 7–14 days incubation, depending on the cell growth rate, foci were stained using crystal violet (Beyotime) and counted. For the drug treatment assay, cells were plated into 96-well plates, and cerdulatinib (#S3566; Selleck Chemicals, Houston, TX, USA) was added to the culture medium. After 72 h treatment, cell viability was assessed.
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