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5 protocols using protan ba85

1

Western Blot Analysis of KLC Proteins

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Methods were modified from those previously described3 (link),24 (link). Samples were mixed with SDS buffer (125 mM Tris pH 6.8; 2% SDS; 5% 2-beta mercaptoethanol; 5% glycerol; with bromophenol blue). After boiling, samples were subjected to SDS-PAGE using 10% polyacrylamide gels and transferred to nitrocellulose membranes (Protan BA85, Whatman). After blocking non-specific sites with 5% skimmed milk protein, membranes were incubated with primary antibody: Rabbit pAb KLC1 [N2C2] (GeneTex, Cat No: GTX114510) or rabbit pAb KLC1 (Abcam, Cat No: ab187179), or the following mouse mAbs: KLC (H7) (Santa Cruz, Cat No: sc-515792), KLC (63–90) (Prof. Scott Brady43 (link), University of Illinois at Chicago), or MANEM1 5D10 against emerin44 (link), MANLAC1 4A7 against Lamin A/C45 (link), or mAb GST 17A10 (raised against recombinant GST). This was followed by washing and incubation with either peroxidase-labelled goat anti-rabbit immunoglobulins (Dako, Denmark, Cat No: P0448) or peroxidase-labelled rabbit anti-mouse immunoglobulins (Dako, Cat No: P0260) (1/1000). Antibody reacting bands were detected with SuperSignal West Femto chemiluminescent detection system (ThermoFisher Scientific, Cat No: 34094) and ChemiDoc Touch imaging system (BioRad Ltd.).
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2

Cell and Tissue Protein Extraction and Western Blot

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Cell lysis buffer (125 mM Tris pH 6.8, 2 % SDS, 5 % 2-beta mercaptoethanol, 5 % glycerol with protease inhibitors: Sigma P8340 and 1mM PMSF) was used for the extraction of cultured cells and tissue lysis buffer (50mM Tris pH 6.8, 1 % EDTA, 10 % SDS, 5 % beta mercaptoethanol, 10 % glycerol with protease inhibitors) was used for the extraction of tissue samples (250 mg/ml). Bromophenol blue was added to the samples which were then boiled and separated by SDS-PAGE using 4 to 12 % polyacrylamide gels (Ref: NW04125BOX; ThermoFisher Scientific) and then electroblotted onto nitrocellulose membranes (Protan BA85, Whatman). Non-specific sites were blocked with 5 % skimmed milk protein and the membranes then incubated with monoclonal antibody supernatants (diluted: 1/10, except MANNES1E: 1/50 and MANDRA1: 1/100), followed by washing and incubation with secondary antibody (peroxidase-labelled rabbit anti-mouse immunoglobulins; 1/1000, Dako, Denmark). Antibody reacting bands were detected with SuperSignal West Femto chemiluminescent reagent (Cat No: 34094; ThermoFisher Scientific) and visualized with a ChemiDoc Touch imaging system (BioRad Ltd.).
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3

Western Blot for Muscle Proteins

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Human muscle tissue was extracted in: 50 mM Tris pH 6.8, 1% EDTA, 10% SDS, 5% beta-mercaptoethanol, 10% glycerol with protease inhibitors. After the addition of bromophenol blue and after boiling, the extract was loaded, either as a single strip or in formed wells, and subjected to SDS-PAGE using 4 to 12% polyacrylamide gradient gels and transferred to nitrocellulose membranes (Protan BA85, Whatman). After blocking non-specific sites with 5% skimmed milk protein, membranes were incubated for 1 hour with monoclonal antibody (1/50), followed by washing and incubation for 1 hour with peroxidase-labelled rabbit anti-mouse immunoglobulins (1/1000, Dakopatts, Denmark). Antibody reacting bands were visualized with West Pico or West Femto chemiluminescent detection systems (Pierce, Thermofisher). Prestained Mr markers were EZ-Run 10–170 kD or PageRuler Plus 10–250 kD (both Thermofisher).
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4

SDS-PAGE and Western Blotting Protocol

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Cultured cells were extracted in 125 mM Tris pH 6.8, 2% SDS, 5% 2-beta mercaptoethanol, 5% glycerol with protease inhibitors (Sigma P8340 plus 1 mM PMSF). Tissue samples (250 mg/ml) were extracted in: 50 mM Tris pH 6.8, 1% EDTA, 10% SDS, 5% beta mercaptoethanol, 10% glycerol with protease inhibitors. After the addition of bromophenol blue and after boiling, samples were subjected to SDS-PAGE using 4 to 12% polyacrylamide gels and transferred to nitrocellulose membranes (Protan BA85, Whatman). After blocking non-specific sites with 5% skimmed milk protein, membranes were incubated with monoclonal antibody (1/50), followed by washing and incubation with peroxidase-labelled rabbit anti-mouse immunoglobulins (1/1000, Dako, Denmark). Antibody reacting bands were visualized with West Femto chemiluminescent detection system (Pierce, Thermo Scientific).
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5

Western Blot Analysis of XIRP1 and Annexin A5

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Samples were mixed with SDS buffer (125 mM Tris pH 6.8; 2% SDS; 5% 2-beta mercaptoethanol; 5% glycerol; with bromophenol blue), boiled and subjected to SDS-PAGE using 10% polyacrylamide gels and transferred to nitrocellulose membranes (Protan BA85, Whatman). Non-specific sites were blocked with 5% skimmed milk protein, membranes washed with PBS and then incubated with primary monoclonal antibodies against: XIRP1, (Xin-alpha (D-8); sc-166,658; 1/100; Santa Cruz Biotechnology, Insight Biotechnology Ltd., Wembly, UK); or GST, mAb 17A10 (1/100). This was followed by washing in PBS and incubation with secondary antibody (peroxidase-labelled rabbit anti-mouse immunoglobulins, P0260; 1/1000; Dako, Denmark). Alternatively, for the detection of annexin A5, pAb ANXA5 (Abcam; ab14196; 1.4 μg/mL) primary antibody followed by goat anti-rabbit Ig HRP (P0448; Dako; 1/1000) secondary antibody. All antibodies were diluted in PBS containing 0.05% Triton X, 0.1% BSA, 1% horse serum and 1% fetal bovine serum. XIRP1 and annexin A5 antibody reacting bands were detected with SuperSignal West Femto chemiluminescent reagent (Cat No: 34094; ThermoFisher Scientific) and GST antibody reacting bands were detected with SuperSignal West Pico Plus chemiluminescent reagent (Cat No: 34580; ThermoFisher Scientific) and visualized with a ChemiDoc Touch imaging system (BioRad Ltd.).
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