The largest database of trusted experimental protocols

Lsm 510 inverted confocal microscope

Manufactured by Zeiss
Sourced in Germany

The LSM 510 inverted confocal microscope is a high-performance imaging system designed for advanced fluorescence microscopy applications. It features a precise optical system and advanced detection capabilities to provide high-resolution, three-dimensional images of biological samples.

Automatically generated - may contain errors

48 protocols using lsm 510 inverted confocal microscope

1

Cellular Uptake of Functionalized Magnetic Nanoparticles

Check if the same lab product or an alternative is used in the 5 most similar protocols
NIH/3T3 fibroblasts were seeded onto 35 mm tissue culture dishes (FluoroDish, World Precision Instruments, Sarasota, FL, USA) and incubated for 24 h with 0.2 μm filtered 20 μg mL−1 MMNP@PEG@RA123 in DMEM supplemented with 10% fetal bovine serum (FBS, Life Technologies) and 1% penicillin/streptomycin. MMNP@PEG@RA123 were prepared by post-functionalization of MMNP@PEG with RA123 in water. The cells were then rinsed with PBS and treated with Hoechst nuclear stain (Life Technologies). Standard and z-stack images of the live cells were taken using a Zeiss LSM 510 inverted confocal microscope (Carl Zeiss AG, Oberkochen, Germany). Hoechst staining was observed at λem = 410 nm and two-photon excitation (λex = 760 nm), and MMNP@PEG@RA123 were visualized using λem = 525 nm and λex = 488 nm. z-Stack images were taken with slices spaced evenly over 8–15 μm z-stack heights. Images were processed using ZEN 2.3 Lite software (Blue edition, Carl Zeiss Microscopy GmbH, Munich, Germany).
+ Open protocol
+ Expand
2

Analyzing GFP-LC3 Puncta in Macrophages

Check if the same lab product or an alternative is used in the 5 most similar protocols
GFP-LC3 plasmid was purchased from Addgene and transfected into PMA-differentiated U937 macrophage-like cells cultivated on collagen-coated coverslips using Attractene transfection reagent (Qiagen). Following transfection, cells were rinsed with 0.05% Saponin in PBS and then fixed with 4% paraformaldehyde in PBS for 20 min. After washing the cells with PBS twice, the coverslips were washed with distilled water once and then mounted onto glass slides. Images were taken with a 63 × Plan Apochromat 1.4 NA objective on a Zeiss LSM-510 inverted confocal microscope (Carl Zeiss, Jena, Germany) at room temperature. Images were analysed and processed using ZEN acquisition software. To quantify the percentage of cells with GFP-LC3 puncta, at least 50 cells per experiment were counted in randomly selected fields.
+ Open protocol
+ Expand
3

Dextran Uptake in M. smegmatis

Check if the same lab product or an alternative is used in the 5 most similar protocols
M. smegmatis mc2 155 (1.1 × 108 CFU/ml) at mid-log phase (OD = 0.6) was treated with 250 µg/ml FITC-labeled, 150-kDa dextran (catalog number 46946; Sigma-Aldrich) and a D-AMP (D-LAK120-A or D-LAK120-HP13) or rifampin at the respective MIC for 20 min. Following treatment, the bacterial cells were centrifuged at 7,500 rpm for 10 min and washed three times with phosphate-buffered saline (PBS). Cells were then fixed in 2% formaldehyde at room temperature (RT) for 20 min. After fixation, the cells were washed twice and resuspended in PBS. Amounts of 20 µl of sample were then allowed to air dry on microscope slides overnight. Samples were then imaged with a 65× oil immersion objective lens using a Zeiss LSM-510 inverted confocal microscope (Carl Zeiss, Inc.). FITC was excited with a 488-nm laser and detected with a 505-nm long-pass filter.
+ Open protocol
+ Expand
4

Zebrafish Embryo Maintenance and Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
AB strain zebrafish were raised and maintained under standard laboratory conditions at 28.5°C [17 (link)]. For whole mount in situ hybridization experiments, embryos were raised in 0.2 mM 1-phenyl-2-thiourea (Sigma) to block pigmentation.
The transgenic fish Tg:[(fabp10a:dsRed;ela3A:GFP)gz15] line was generated by the Gong laboratory [18 (link)] and shared with us by the Leach laboratory. The transgenic fish Tg:[(P0-pax6b:GFP)ulg515] (abbreviated pax6b:GFP) was generated by the Martial laboratory [19 (link)] and shared with us by the Chen laboratory. For live imaging WT and sar1b-MO larvae were anesthetized in Tricaine (Sigma) and mounted in low-melt agarose. All confocal imaging in this manuscript was taken with a Zeiss LSM510 inverted confocal microscope (Vanderbilt Cell Imaging Shared Resource), while all other imaging was taken with a Zeiss AxioImager Z1. All experiments were conducted in accordance with the guidelines established by the IACUC at Vanderbilt University.
+ Open protocol
+ Expand
5

Labeling Neuromuscular Junctions in Frozen Muscle

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fresh frozen muscle sections from Patient 1 were labelled with Alexa Fluor® 594 conjugated α-bungarotoxin (Life Technologies, Cat. No. B13423) and Alexa Fluor® 488-fasciculin (Life Technologies, special order) at 1 μg/ml for 1 h at 37°C to stain for AChRs and acetylcholinesterase (AChE), respectively. The presynaptic Schwann cell marker S100β was labelled using a mouse monoclonal anti-S100β antibody (Sigma, Cat. No. SAB1402349) and the corresponding fluorescently conjugated secondary antibody (Life Technologies, Cat. No. R37115). Then, sections were washed in PBS and fixed for 10 min in 3% paraformaldehyde at room temperature. Images from the muscle endplates were taken using a Zeiss LSM 510 inverted confocal microscope. Co-localization studies were performed using ImageJ software (Schindelin et al., 2012 (link)).
+ Open protocol
+ Expand
6

Larval Neuromuscular Junction Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
Third-instar WCS and homozygous spastin5.75 or trans-heterozygous flowerDB25/DB56 larvae were filleted, dissected and immunostained using standard methods (e.g. Ozdowski et al., 2011 (link)). Briefly, larvae were dissected in room temperature PBS and fixed for 30 minutes in 4% paraformaldehyde, immunostained at 4°C overnight using the neuronal membrane marker rabbit anti-HRP (1:100; Jackson ImmunoResearch, PA, 323-005-021) alone or with mAb 22C10 to label microtubules (mouse anti-Futsch, 1:50; Developmental Studies Hybridoma Bank, University of Iowa, Iowa City, IA). Secondary antibodies (Alexa Fluor 488 goat anti-rabbit A-11070 and Alexa Fluor 568 goat anti-mouse A-11031; 1:400; Life Technologies, Grand Island, NY) were incubated for 2–3 hours at room temperature. Fillets were mounted in H-1000 (Vector Laboratories, Burlingame, CA) and z-series images of muscle 4 synapses from larval segments 2–4 acquired on a Zeiss LSM 510 inverted confocal microscope using 63× 1.4 N.A. or 100× 1.2 N.A. PlanApo objectives (Oberkochen, Germany).
+ Open protocol
+ Expand
7

Immunohistochemical Analysis of FOXP3 and CD3 in Colonic Biopsies

Check if the same lab product or an alternative is used in the 5 most similar protocols
A colonic biopsy was performed on patient A.II.1 at the time of her presentation, aged 19 years. The biopsy was stained with Hematoxylin and Eosin stain and reviewed by pathologists at the Hammersmith hospital, London, UK. Immunohistochemical staining of formalin-fixed paraffin-embedded (FFPE) sections was performed on patient and tissue-matched FFPE sections from healthy control donors as well as age-matched donors diagnosed with classical Crohn’s Disease (provided by the Oxford Centre of Histopathology Research and the Oxford Gastrointestinal Illness Biobank) using antibodies to FOXP3 (Abcam; 236A/E7) followed by TSA amplification (PerkinElmer) and CD3 (Dako; F7.2.38) followed by Alexa Flour 488-conjugated goat anti-mouse IgG (LifeTechnologies). Nuclei were stained using Vectashield antifade mounting medium with DAPI (Vector Laboratories) and slides were examined with a Zeiss LSM510 inverted confocal microscope. ImageJ (ImageJ) and Photoshop (Adobe) were used for the processing and presentation of the images.
+ Open protocol
+ Expand
8

Confocal Microscopy Image Acquisition

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunofluorescence images were obtained using a Zeiss LSM 510 inverted confocal microscope and prepared for publication with Zeiss LSM 5 Image Browser software and Adobe Photoshop CS4.
+ Open protocol
+ Expand
9

Immunostaining of Lung Tissue Sections

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffin sections were de-waxed and incubated in primary antibody overnight at 4°C. Primary antibodies were detected using the Vectastain Elite ABC kit (Vector Labs, UK) and diaminobenzidine detection (BD Bioscience, UK) following the manufacturers' instructions. Antigen retrieval was performed for Vangl2, phospho-histone H3 and CC10 staining using citrate buffer (pH 6) incubation in a microwave for 3×3 min. Cryosections were incubated with Rhodamine-conjugated Phalloidin (Biotium, Hayward, CA, 00027; 1:200) following the manufacturer's instructions.
Lung slices were fixed in 4% paraformaldehyde (PFA) for 15 min, and permeabilized in 0.5% Triton X-100 for 30 min. Non-specific protein binding was blocked for 1 h at room temperature using 1% BSA and 0.2% Triton X-100 in PBS (PBS-BT). Slices were incubated with primary antibody overnight at 4°C, washed several times in PBS then incubated with donkey anti-rabbit-conjugated Alexa Fluor 594 (Life Technologies, A21207; 1:500) or goat anti-Armenian-Hamster-conjugated Cy3 (Jackson ImmunoResearch, West Grove, PA, 127-165-099; 1:500) secondary antibodies, and imaged using a Zeiss LSM-510 inverted confocal microscope. Controls, where the primary antibody was omitted, were included in every immunostaining experiment.
+ Open protocol
+ Expand
10

Measuring Cytosolic and Mitochondrial ROS in HPASMCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
To measure cytosolic and mitochondrial ROS production in HPASMCs, cytosolic specific staining with DCFH and DHE and mitochondrial specific staining with Mitosox were used [18 (link)]. HPASMCs were incubated in 24-well plates and treated with different reagents for 4 h. Then washed the cells with PBS and incubated with pre-warmed PBS containing at a final working concentration of 10 μM DCFH dye for cytosolic H2O2 detection at 37 °C for 30 min and 10 μM DHE fluorescent probe for cytosolic superoxide anion (O2−) at 37 °C for 1 h. The same process for mitochondrial ROS detection, except incubation in Mitosox at 200 nM. The fluorescence of DCFH was measured using excitation and emission wavelengths of 480 and 535 nm, and the fluorescence of DHE was measured using excitation 510–560 nm and emission of 590 nm, respectively. MitoSOX Red fluorescence was measured at 583 nm following excitation at 488 nm using a Zeiss LSM 510 inverted confocal microscope. Thirty smooth muscle cells in each group were randomly photographed, and their total fluorescence was recorded. Data were analyzed using Flow Version software.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!