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73 protocols using t8200

1

Immunofluorescence Analysis of Autophagy

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Cells were seeded on coverslips and treated with cisplatin for 24 h, and then rinsed three times with PBS, fixed for 15 min in 4% paraformaldehyde, and again washed three times with PBS for 3 min per wash. The fixed cells were permeabilized with 0.1% Triton X-100 (Solarbio, T8200) in PBS for 20 min at room temperature, then blocked with normal goat serum for 30 min at room temperature. The cells were then incubated with the indicated primary antibodies overnight at 4°C, followed by incubation with fluorescent-tagged secondary antibodies for 1 h at 37°C in the dark. All nuclei were stained with DAPI for 15 min at room temperature in the dark. Cells were then visualized under a confocal microscope (Leica TCS-SP8, Germany), and the number of LC3 and LAMP1 double-positive dots was counted. The antibodies used are listed in Table 1.
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2

Immunofluorescent Localization of LAIR-1

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First, SW‐1088 cells were allowed to climb cell climbing sheets in a 6 well plate, fixed at room temperature with 4% paraformaldehyde (Solarbio, P1110) for 15 min, washed with PBS three times, permeabilized with 0.5% triton x‐100 (Solarbio, T8200) for 20 min at room temperature. Next, the sheets were blocked with 10% goat serum for 1 h and washed three times with PBS. The cells were then incubated with the rabbit anti‐LAIR‐1 (LAIR‐1, 1: 400, 67220‐1‐Ig, Proteintech) at 4°C overnight and then with fluorescent anti‐rabbit IgG (H + L) antibody (1:200, Jackson ImmunoResearch) in the dark at room temperature for 1 h. Finally, nuclei were counterstained with DAPI for 40s followed by phalloidin staining for 10 min. The cells were photographed using confocal laser scanning microscopy (Nikon, C2si/C2).
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3

Immunofluorescent Labeling of Brain Cell Types

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The brain-like tissues were fixed with 4% paraformaldehyde for an hour and washed with 1× phosphate-buffered saline (PBS) 3 times at 5-min intervals. After being incubated in 1× PBS with 5% goat serum (AR0009, Boster, USA), a primary antibody diluted 1:200 and 0.3% Triton X-100 (T8200, Solarbio) overnight at 4 °C, the tissues were washed with 1× PBS 6 times at 10-min intervals and then incubated in 1× PBS with 5% goat serum, a secondary antibody diluted 1:200 and 0.3% Triton X-100 for 4 h before DAPI (AR1176, Boster) was added for an additional 10 min. Finally, the tissues were washed 6 times in 1× PBS at 10-min intervals and observed under an LSCM. All antibodies used are summarised in Table 2. The LSCM software NIS-elements AR was used for measuring and counting the length and the number of axons and dendrites.

Summary of antibodies used in this study

Cell typePrimary antibodySecondary antibody
NeuronsRabbit anti-MAP2 (8707S, CST, USA)Goat anti-rabbit IgG, Cy3-conjugated (CW0159S, CWBIO, China)
Anti-neurofilament (2838S, CST)Goat anti-mouse IgG, Cy3-conjugated (CW0145S, CWBIO)
AstrocytesMouse anti-GFAP (3670S, CST)Goat anti-mouse IgG, FITC-conjugated (CW0113S, CWBIO)
Rabbit anti-GFAP (16825-1-AP, Proteintech, USA)Goat anti-rabbit IgG, FITC-conjugated (CW0114S, CWBIO)
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4

Immunofluorescence Staining of Frozen Tissue

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4 μm thick section slides from frozen human tissue were washed three times in PBS. Then the sections were permeabilized with 0.5% Triton X-100 (T8200, Solarbio) for 20 min. After 5% BSA incubation for 1 h, sections were incubated in ARPC1B and glial fibrillary acidic protein (GFAP) antibodies at 4°C overnight. Following incubation with fluorescein (FITC) or rhodamine (TRITC) secondary antibody and 4’,6-diamidino-2-phenylindole (DAPI, C0060, Solarbio), the samples were detected using fluorescence microscope (Leica). The images were merged digitally to monitor the co-localization condition.
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5

Immunofluorescence Staining of Cultured Cells

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Cells grown on glass coverslips in a 24-well plate were fixed in 4% paraformaldehyde (Keshi, 30525-89-4) for 20 min, permeabilized with 0.2% Triton X-100 (in PBS, Solarbio, T8200) for 20 min, and then blocked with 5% BSA (in PBS, Beyotime, ST023) for 2 h at room temperature (RT). Primary antibodies were incubated with cells overnight at 4°C and then with Alexa Fluor-conjugated secondary antibodies for 1 h at 37°C. Next, the cells were counterstained with DAPI (4′,6′-diamidino-2-phenylindole, 1:100; Solarbio, C0060) in the dark for 10 min to visualize the nuclei. Finally, the tablets were sealed using an anti-fluorescence quenching agent (Beyotime, P0128S).
Images were captured with a confocal laser scanning microscope at 400× magnification (eyepiece 10×, objective 40×). Photo software: OlyVIA; the fluorescence microscope (80i) and microscope lens (including color filter, E400) were from Nikon, Japan. The software used for localization statistics was ImageJ.
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6

Immunofluorescence Staining of Macrophage Subsets

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Macrophages were washed with PBS three times. Four percent fixative solution (Solarbio, P1110) was added to the Petri dish for 10 min. Then, the solution was removed and cells washed three times. Next, 0.5% Triton X-100 (Solarbio, T8200) was added to the dish for 10 min. The solution was removed and cells washed three times. Five percent BSA (Solarbio, A8010) was added to the dish, and it was incubated for 1 h at room temperature. Then, primary antibodies were added to the M0 (GLRX1: 1:500, Abcam, ab45953; CD11b: 1:100, Proteintech, 66519-1-lg) and M2 macrophages (GLRX1: 1:500, Abcam, ab45953; CD163: 1:100, Abcam, ab156769) (18 (link)), respectively, and they were incubated overnight at 4°C. The solution was removed and cells washed three times. Secondary antibodies (DyLight 488 goat antirabbit polyclonal antibody, Abcam, ab96899, 1:200; DyLight 594 goat antimouse polyclonal antibody, Abcam, ab96881, 1:200) were used for 1 h at room temperature. The solution was removed and cells washed three times. Prolong™ Diamond Antifade Mountant with DAPI (Invitrogen, P36962) was added to the dish, and photos were taken with confocal microscopy.
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7

Immunofluorescence Analysis of Autophagy Markers

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The paraffin-embedded kidney tissues were cut into 3-μm sections, dewaxed, rehydrated, and antigen retrieved as previously described. To increase the cell membrane permeability to antibodies, 0.2% Triton 100X (Solarbio, T8200) was extracted. After incubation with the blocking serum for 1 hour at room temperature (approximately 25°C), the sections were stained with the anti-LC3B antibody (ab51520, Abcam, 1 : 1000) and the anti-p62 antibody (ab56416, Abcam, 1 : 200) at 4°C overnight, followed by the donkey anti-rabbit/mouse IgG (H + L) highly crossadsorbed secondary antibody (A-21206/A-21203, Invitrogen, 1 : 1000). The nuclei were counterstained with 4′6-diamidino-2-phenylindole. Image acquisition and processing were performed as previously described. The immunofluorescence staining was assessed with a semiquantitative scoring method by two independent observers unware of the treatment received by each group.
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8

Quantitative Immunofluorescence Analysis

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Cells were cultured in 24-well plate. Following treatments, samples were fixed in 4% paraformaldehyde,permeabilized in 0.5% Triton X-100 (T8200, Solarbio, Beijing, China)and blocked with 5% goat serum, followed by incubation with anti-COL2A (1:100, YT1022, Immunoway), anti-GSDMD (1:100, A18281, ABclonal) and anti-GRP78 (1:200, ab21685, Abcam) overnight at 4°C. Subsequently, samples were incubated with secondary antibodies (Invitrogen, United States) for 1 h in the dark. Cell nuclei staining was performed with DAPI (Solarbio, China) and photographed immediately with a fluorescence microscope (IX73, Olympus, Japan).
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9

Immunofluorescence Localization of F-Actin

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After transfection, SGC7901 and SNU1 cells were mounted on slides, fixed with 4% formaldehyde for 30 minutes, and then permeabilized using 0.5% Triton X-100 (T8200; Solarbio) for 10min. After blocking with 1% BSA (A8010; Solarbio) for 30 minutes, cells were incubated with a mouse monoclonal anti-F-actin antibody (Ab205; Abcam) at 4°C overnight, followed by a secondary antibody (Beyotime) for 30 minutes at 37°C in the dark. DAPI (C1002; Beyotime) was used for cell-nuclei staining. Confocal laser-scanning microscopy (FV1000, Olympus) was used for location detection.
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10

Immunofluorescence Analysis of Expanded Islet Clusters

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Expanded islet clusters were harvested using cell recovery solution (Corning, 354253) and fixed in 4% paraformaldehyde for 30 min at room temperature, followed with blocking and permeabilizing in PBS with 0.5% Triton X-100 (Solarbio, T8200) and 5% donkey serum (Solarbio, SL050) for 30 min at room temperature. Then, samples were incubated with primary antibody at 4 °C overnight, followed by incubation with secondary antibody for 2 h at room temperature. DAPI (Beyotime, C1002) was used to stain the nucleus and find islets. The following antibodies were used for immunofluorescence: anti-insulin (1:200, sc-9168; Santa), anti-somatostatin (1:600, ab30788; Abcam), anti-glucagon (1:200, G2654; Sigma). anti-PDX1 (1:200, ab47267; abcam), anti-SOX9 (1:200, ab185966; abcam), anti-NKX6.1 (1:200, ab221549; abcam), anti-MAFA (1:200, ab26405; abcam), anti-KI67 (1:200, D3B5; Cell Signaling Technology). Imaging of the expanded islet clusters was performed on Zeiss LSM 780 and processed using ImageJ or Adobe illustrator software.
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