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21 protocols using rosa26 creert2

1

Genetically Modified Murine Models

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All mice were bred in our specific pathogen–free animal facility at the Albert Einstein College of Medicine. We used 6- to 8-week-old WT B6 male or female mice, congenic CD45.1+/+ (JAX#002014), B6-Kd (58 (link)), OT-I+ (JAX#003831) crossed to Rosa26Actin-tomato-loxP-STOP-loxP (LSL)–GFP (Td+) (JAX#007576), gBT-I+ [gift from F. Carbone (59 (link))] crossed to UBCGFP/GFP (JAX#004353) or to CD45.1+/+ mice, Ccr2DTR-CFP/WT [gift from E. Pamer (60 (link))], Itgax/Cd11cDTR/WT (JAX#004509), Rosa26CreERT2 (JAX#008463), Irf4loxP/loxP (or fl/fl) (JAX#009380), Ifngr1−/− (JAX#003288), and CX3CR1ERT2Cre (JAX#020940) crossed to Rosa26LSL-PTX [gift from S. Coughlin (46 (link))] purchased from the Jackson laboratories unless otherwise indicated. All mice are on the B6 genetic background unless otherwise specified.
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2

Conditional Knockout Mice Generation

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Rorcfl/fl (36 (link)) mice were crossed Il17fRFP (37 (link)), Rosa26-CreERT2, or Cd4cre (38 (link)) mice to generate conditional knockout mice as indicated. The C57BL/6J, CD45.1, Rag1−/−, Tcrbd−/−, Il4GFP, Rosa26-CreERT2, and 2d2 TCR transgenic mice were obtained from the Jackson Laboratory. All the mice were bred and maintained at specific pathogen–free condition in the animal facility of Tsinghua University. Six- to eight-week-old and sex-matched mice were used for all experiments. Animal experiments were performed according to the protocols approved by the Institutional Animal Care and Use Committee.
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3

Characterization of Mob1 Knockout Mouse Models

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Mouse strains used in this study were PGR-Cre (27 (link)); Mob1aflox/flox;Mob1b−/− (23 (link)); Rosa26-LSL-YFP reporter (The Jackson Laboratory); Rosa26-LSL-tdTomato reporter (The Jackson Laboratory); Rosa26-CreERT2 (The Jackson Laboratory); Trp53flox/flox (The Jackson Laboratory) and Tazflox/flox (kindly provided by Dr. J. Wrana, Lunenfeld-Tanenbaum Research Institute). Yap1flox/flox mice were generated using Yap1flox/flox ES cells from the Knockout Mouse Project Repository. PGR-Cre and Rosa26-CreERT2 mice were of the C57BL/6 background, and Mob1aflox/flox;Mob1b−/− mice were back-crossed to C57BL/6 for more than six generations. Postnatal Mob1a/b double homozygous mutant mice (Rosa26-CreERT2;Mob1aflox/flox;Mob1b−/− mice; designated roMob1 DKO) were generated by administering a single i.p. dose of 1 mg TAM (Toronto Research Chemicals, Toronto, Canada) at 8 to 12 wk of age. Primers used for genotyping PCR are listed in SI Appendix, Table S1A. All mice were kept in specific pathogen-free facilities at Kobe University.
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4

Generating Transgenic Mouse Lines for Immunological Studies

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Pdcd1−/− (Odorizzi et al., 2015 (link)), EomesGFP (Paley et al., 2013 (link)), Tcf7flox/flox (Weber et al., 2011 (link)) and Eomesflox/flox (Intlekofer et al., 2008 (link)) mice have been described. Cd4CRE and Rosa26-CREERT2 mice were purchased from Jackson Laboratory. Tcf7flox/flox mice were bred to Cd4CRE mice and TCR transgenic P14 C57BL/6 mice (TCR specific for LCMV DbGP33–41). Eomesflox/flox mice were bred to Rosa26-CREERT2 mice and TCR transgenic P14 C57BL/6 mice. Pdcd1−/− and EomesGFP mice were bred to TCR transgenic P14 C57BL/6 mice. 6-8 week-old C57BL/6 Ly5.2CR (CD45.1) or C57BL/6 (CD45.2) mice were purchased from NCI. Both male and female mice were used. All mice were used in accordance with Institutional Animal Care and Use Committee guidelines for the University of Pennsylvania.
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Genetic Mouse Models for T cell Development

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C57BL/6J, plck-Cre, Rosa26-STOP-tdTomato, Rosa26-CreERT2, B6.129S2-Tcratm1Mom/J (TCRα−/−), and B6(SJL)-Foxn1nu-2J; GrsrJ (nude) mice were purchased from the Jackson Laboratory. plck-Id1 transgenic mice (Kim et al., 1999 (link)) and plck-Cre; E2Af/f; HEBf/f (Wojciechowski et al., 2007 (link)) were as described. All animal experiments were performed according to protocols approved by the Institutional Animal Care and Use Committee policies at the Oklahoma Medical Research Foundation.
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6

Mouse Genotypes for Experimental Assays

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Ptpn6fl/fl, Cx3cr1-Cre, and Rosa26LSL−YFP mice have been described elsewhere (25 (link), 35 (link), 36 (link)). Rosa26-CreERT2 and dLck-Cre mice were obtained from the Jackson Laboratory (37 (link), 38 (link)). C57BL/6 mice used for controls were obtained from Jackson Laboratories or Envigo. Mice were kept in specific pathogen-free facilities at the University of California, San Francisco (UCSF), Revolution Medicines or Taconic Biosciences, and cared for in accordance with institutional guidelines. All genotypes of mouse strains used were confirmed by PCR analysis of tail DNA.
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7

Transgenic Mouse Breeding and Tamoxifen Induction

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Mice were bred and maintained at the Kansai Medical University Research Animal Facility in accordance with the Kansai Medical University guidelines. C57BL/6 J, Bmi1CreER/+27 (link), Rosa26CreERT2/+, and Rosa26rbw/+ mice were purchased from Jackson Laboratories (Sacramento, CA, USA) or generated as previously described15 (link)16 (link)17 (link). The experiments were approved by the Kansai Medical University Welfare Committee. Tamoxifen (Sigma, St. Louis, MO, USA) was dissolved in corn oil (Sigma) and intraperitoneally injected into adult mice at concentrations of 9 and 5 mg/40 g body weight for Bmi1CreER/+ mice and Rosa26CreERT2/+ mice, respectively.
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8

Generation and Characterization of RecQL4 Mouse Models

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Recql4K525A and Recql4G522Efs mice were generated using Cripsr/Cas9 methods by the Mouse Engineering at Garvan/ABR (MEGA) services (Garvan Institute, Darlinghurst, Australia). Lysine 525 was mutated to Alanine (AAG>GCA) in single cell C57Bl/6 embryos via sgRNA-directed gene targeting and homologous recombination with a single stranded DNA oligonucleotide substrate. Viable pups were screened by DNA sequencing and one C57Bl/6 male carrying the K525A mutation on one allele and a 2bp insertion (GA) after the T521 codon (G522Efs) on the other allele was identified as a founder. The chemically (ENU) induced Recql4M789K and Recql4R347X mutations were obtained from the Australian Phenomics Facility (APF, Canberra, Australia: IGL01381 and IGL01809). Recql4fl/fl mice (C57BL/6-Recql4tm2272Arte) have been previously described [20 (link), 44 (link)]. Rosa26-CreERT2 mice on a C57Bl/6 background were purchased from The Jackson Laboratory (B6.129-Gt(ROSA)26Sortm1(cre/ERT2)Tyj/J, Stock Number: 008463) and have been previously described [20 (link)]. All lines were on a backcrossed C57Bl/6 background. ENU mutants were outcrossed at least 6 times and assessed across multiple generations to eliminate effects of any additional mutations. Tamoxifen containing food was prepared by Specialty Feeds (Perth, Australia) at 400mg/kg Tamoxifen citrate (Sigma Aldrich) in a base of standard mouse chow.
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9

Generation and Characterization of Knockout Mouse Models

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Mice harboring a loxP-flanked Tfap4 allele were generated in 129P2/Ola-derived E14TG2a ES cells essentially as described (Supplementary Fig. 1a)24 (link). Tfap4−/− mice were described previously24 (link). Both AP4 mutant strains were backcrossed to C57BL6 mice for more than 10 generations before intercrossing or breeding to other transgenic mice. Myc-flox mice and c-Myc-GFP fusion protein knock-in mice were described previously35 (link), 40 (link). C57BL6 and B6-Ly5.2 (CD45.1) mice were purchased from the National Cancer Institute. OT-I transgenic43 (link), Tcra−/− (ref. 44 (link)), Il2ra−/− (ref. 45 (link)), ROSA26-CreERT2 (ref. 41 (link)) and B6-Thy-1.1 mice were purchased from the Jackson Laboratory and P14 transgenic mice28 (link) were purchased from Taconic. Il2ra−/− P14 T cells were collected from mixed bone marrow chimeric mice reconstituted with a mixture of bone marrow cells from Il2ra−/− (Thy-1.2) and WT (Thy-1.1) P14 mice. CD8-Cre mice were generated previously in the C57BL6 background27 (link). All mice were maintained in a specific pathogen free facility at Washington University in St. Louis, and all experiments were performed according to the protocol approved by Washington University’s Animal Studies Committee. All mice were analyzed at 6 – 14 weeks of age, and both sexes were included without randomization or blinding.
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10

Genetic Tracing of Cardiac Development

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Mouse strains Numbfl/fl&Numblikefl/fl (65 (link), 76 (link)), Cdh2fl/fl (49 (link)), Gt(ROSA)26Sortm4(ACTB-tdTomato,-EGFP) (mTmG) (53 (link)), Rosa26CreERT2 (63 (link)), and R26R-Confetti (64 (link)) were purchased from The Jackson Laboratory. Robert Schwartz, University of Houston, Houston, TX, provided Nkx2.5Cre/+ mice (41 (link)). The aMHC-cN-cadherin transgene was injected into fertilized oocytes as previously described (67 (link)). Embryos harvested at around noon on embryonic day 9 were counted as E9.5, and those harvested at around 6 PM were counted as E9.75. All animal experiments are approved by the Institutional Animal Care and Use Committee at Albany Medical College and performed according to the Guide for the Care and Use of Laboratory Animals (77 ).
Various experimental protocols were applied in this study, and most of the experiments were briefly introduced in the text to make the content easier to be understood. The details of each protocol are available in SI Appendix.
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