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11 protocols using cd20 clone 2h7

1

Monitoring Immune Response after Vaccination

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Immunologic parameters were monitored following vaccination and in monthly intervals after the start of immunosuppression in blood and BAL. Blood samples were collected from all animals and leukocytes were isolated with red blood cell lysis buffer. Cells were stained in FACS buffer containing 20% FBS, 2% Human Serum, 2% Goat serum, 5mM EDTA, and 0.05% Azide. Cells were stained with CD3, clone SK1, Biolegend; CD4, clone L200, BD; CD8, clone SP34, Biolegend; CD20, clone 2H7, Biolegend. After staining, cells were fixed with paraformaldehyde and analyzed in the LSRII Flow cytometer (BD Bioscience). Data analysis was performed in FLowJo v10.
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2

Murine and Human Monoclonal Antibody Panel

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Murine specific monoclonal antibodies: CD3 (clone 17A2), CD11a (clone M17/4), CD18 (clone M18/2), CD16/CD32 (Fc Block, clone 2.4G2), CD19 (clone 6D5), CD39 (clone Duha59), CD44 (clone IM7), CD47 (clone miap301), CD49d (clone R1-2), CD54 (clone YN1/1.7.4), CD81 (clone Eat-2), CD98 (clone RL388), CD130 (clone 4H1B35), CD138 (clone 281-2), CD155 (clone TX56), CD172a (clone P84), CD205 (clone NLDC- 145), CD229 (clone Ly9ab3), CD267 (clone 8F10), CD274 (clone 10F.9G2), CD319 (clone 4G2), CD326 (clone G8.8), IgA (clone mA-6E1), IgM (clone RMM-1), LAG-3 (Clone eBioC9B7W), SCA-1 (clone D7) and human specific monoclonal antibodies: CD3 (clone UCHT1), CD14 (clone M5E2), CD19 (clone SJ25C1), CD20 (clone 2H7), CD27 (clone L128), CD39 (clone A1), CD81 (clone 5A6), CD130 (clone 2E1B02), CD138 (clone MI15), and CD326 (clone 9C4) were purchased from BioLegend, Miltenyi Biotec, BD Biosciences, Thermo Fisher or produced in house. LEGENDScreen™ Mouse PE Kit was purchased from BioLegend.
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3

PBMC Isolation and Flow Cytometry Analysis

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PBMCs were isolated from peripheral blood samples collected on days 0 (n = 9), 7 (n = 17), and 28 (n = 17) using Lymphoprep (Abbott Diagnostics, Lake Forest, IL, USA), and were stained with CD2 (clone RPA‐2.10; BioLegend, San Diego, CA, USA), CD3 (clones HIT3a and UCHT1; BioLegend), CD4 (clone RPA‐T4; BioLegend), CD10 (clone eBioCB‐CALLA; Thermo Fisher Scientific), CD19 (clone HIB19; BioLegend), CD20 (clone 2H7; BioLegend), CD27 (clone O323; Thermo Fisher Scientific), CD38 (clone HIT2; Thermo Fisher Scientific), and IgD (clone IA6‐2; BD Biosciences, San Jose, CA, USA) in the presence of human Fc receptor (FcR) block (Miltenyi Biotec, Bergisch Gladbach, Germany). CD19+ CD38++ CD27++ cells that were negative for CD2, CD3, CD4, CD10, IgD, and CD20 were counted as plasma cells.14 Data were acquired on an FACS Canto II (BD Biosciences) and analyzed using FlowJo software (FlowJo, Ashland, OR, USA).
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4

Isolation and Expression of Antigen-Specific Rhesus Macaque Antibodies

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Cryopreserved rhesus macaque PBMCs were thawed and stained with LIVE/DEAD fixable violet dead cell stain (Life Technologies). After washing, cells were stained with a cocktail of anti-human antibodies, including CD3 (clone SP34–2; BD Biosciences), CD4 (clone OKT4; BioLegend), CD8 (clone RPA-T8; BioLegend), CD14 (clone M5E2; BioLegend), CD20 (clone 2H7; BioLegend), IgG (G18–145; BD Biosciences), and IgM (clone G20–127; BD Biosciences), and with fluorescently labeled trimer probe (BG505 DS-SOSIP.avi) and peptide probe (FP10–1M6T.avi or FP9-PEG12-biotin) (Kong et al., 2016 (link)). Vivid-CD3-CD4-CD8-CD14-CD20+IgG+IgM- memory B cells that are positively stained with both trimer and peptide probes were sorted into 96-well plates containing lysis solution as previously described (Kong et al., 2016 (link)). Nested PCR was performed using published primers (Mason et al., 2016 (link); Sundling et al., 2012 (link)). Heavy and light chain sequences were cloned into expression vectors containing rhesus macaque immunoglobulin constant regions. IgG was expressed by cotransfecting Expi293F™ cells with equal amounts of paired heavy and light chain plasmids and purified using protein A Fast Flow (GE Healthcare) according to the manufacturer’s instructions.
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5

Isolation and Expansion of SIV-Reactive Memory B Cells

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Cryopreserved PBMCs were thawed, washed, and stained with an antibody cocktail (1:100 dilution) of CD3 (clone SP34-2, BD Biosciences), CD4 (clone OKT4, Biolegend), CD8 (clone RPA-T8, BD Biosciences), CD14 (clone M5E2, BD Biosciences), CD20 (clone 2H7, Biolegend), IgM (MHM-88, Biolegend), IgG (clone G18-145, BD Biosciences) and fluorescently labeled biotinylated SIVmac239 SOSIP.664 Env at room temperature for 20 min in the dark. SIVmac239 Env trimer probes were labeled with two different fluorophores, from which SIVmac239 Env dual positive memory B cells (CD3CD4CD8CD14CD20+IgMIgG+SIVmac239 SOSIP2+) were analyzed with BD FACSMelody or BD FACSFusion, and single-cell sorted, cultured, expanded in 384-well plates as described previously28 (link),29 (link). Briefly, sorted B cells were cultured with Iscove’s modified Dulbecco’s medium (IMDM) with GlutaMAX (Gibco) supplemented with 10% heat-inactivated fetal bovine serum (FBS), 1× MycoZap Plus-PR (Lonza), 100 U/mL human IL-2 (Roche), 50 ng/mL human IL-21 (Invitrogen), 50 ng/mL human IL-4 (Miltenyi), 0.1 μg/mL anti-rhesus IgG (H + L) (BioRad), and irradiated 3T3msCD40L feeder cells. Flow cytometric data were subsequently analyzed using FlowJo (v10.7.1).
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6

Immunofluorescence Analysis of TK Cells

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TK cells were left untreated or were treated with GEM for 48 h. The cells were then pasted to a prepared slide (Mastsunami, Osaka, Japan) by the Shandon cytospin 3 centrifuge (Thermo Fisher Scientific). The cells were fixed with 4% formaldehyde for 15 min at room temperature and methanol for 10 min at −20°C. Each slide was treated with 100 μL blocking solution (PBS/0.3% Triton/5% BSA) for 1 h at room temperature. The slides were subsequently incubated with primary antibody (CD20, clone 2H7; BioLegend) diluted in antibody solution (PBS/0.3% Triton/1%BSA) overnight at 4°C. The slides were incubated with secondary antibody (Alexa488 anti‐rabbi IgG; Thermo Fisher Scientific) for 1 h at room temperature and mounted with 30 μL of VECTASHIELD mounting medium containing DAPI (Vector, CA, USA). Each slide was observed under DeltaVision (GE Healthcare UK, Buckinghamshire, England).
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7

Quantifying CD157 Expression in AML

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Surface expression of CD157 was assessed by flow cytometry (Navios, Beckman Coulter, Krefeld, Germany) using a fluorochrome-conjugated monoclonal antibody (SY11B5; e-Bioscience, San Diego, California). CD157 expression on CD34+/CD38 cells from BM of AML patients and HDs was analyzed using the following antibodies: CD45 (J33), CD34 (581), CD38 (LS198.4.3) and CD33 (D3HL60.251). Corresponding isotype controls were used. All antibodies were purchased from Beckman Coulter (Krefeld, Germany). A CD45DIM/SSCLOW gate was used to limit the analysis to myeloid progenitor cells.
Surface expression analysis of CD157 on AML cell lines and CD20 (clone 2H7, BioLegend, San Diego, California) on RAJI cells was performed on a BD LSR II (Becton Dickinson, Heidelberg, Germany). Staining was performed according to the manufacturer's instructions.
MFI values were determined using FlowJo (Version 9.4.11) (Tree Star Inc., Ashland, Oregon), and surface expression intensity (MFI ratio) was determined as previously described [20 (link)].
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8

Isolation and Expansion of Env-specific Memory B Cells

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Cryopreserved PBMCs were thawed, washed, and stained with an antibody cocktail of CD3 (clone SP34-2, BD Biosciences), CD4(clone OKT4, Biolegend), CD8 (clone RPA-T8, BD Biosciences), CD14 (clone M5E2, BD Biosciences), CD20 (clone 2H7, Biolegend), IgM (clone G20-127, BD Biosciences or clone MHM-88, Biolegend), IgG (clone G18-145, BD Biosciences) and fluorescently labeled BG505 Env at room temperature for 20 min in the dark. BG505 SOSIP.664 was labeled with two fluorophores separately, from which dual positive Env-specific (CD3-CD4-CD8-CD14-CD20+IgM-IgG+BG505 SOSIP2+) and/or 398F1 SOSIP+ memory B cells were analyzed with a FACSFusion sorter and then single-cell sorted, cultured, and expanded as previous described (Huang et al., 2013 (link)). In brief, cells were sorted into Iscove’s modified Dulbecco’s medium (IMDM) with GlutaMAX (GIBCO) supplemented with 10% heat-inactivated fetal bovine serum (FBS), 1X MycoZap Plus-PR (Lonza), 100 U/mL IL-2 (Roche), 50 ng/mL IL-21 (Invitrogen), 50 ng/mL IL-4 (Miltenyi), 0.1 μg/mL anti-rhesus IgG (H+L) (BioRad) and irradiated 3T3msCD40L feeder cells.
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9

Identifying Dual-Specific Memory B Cells

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FACS analysis of PBMC was performed as described previously (Kong et al., 2019 (link)). Briefly, NHP PBMCs were stained with LIVE/DEAD fixable violet dead cell stain (Life Technologies), washed, and then stained with a cocktail of anti-human antibodies, including CD3 (clone SP34–2; BD Biosciences), CD4 (clone OKT4; BioLegend), CD8 (clone RPA-T8; BioLegend), CD14 (clone M5E2; BioLegend), CD20 (clone 2H7; BioLegend), IgG (G18–145; BD Biosciences), and IgD (Dako, polyclonal), and with fluorescently labeled trimer probe (BG505 DS-SOSIP) for 15 mins, and followed by peptide probe FP9-PEG12-PE for another 15 mins. Stained PBMCs were analyzed on BD LSRFortessa X-50. Vivid−CD3−CD4−CD8−CD14−CD20+IgG+IgD− memory B cells that were positively stained with both trimer and peptide probes were considered FP and trimer dual-specific memory B cells. The analysis of the PBMCs was performed using FlowJo.
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10

Isolation and Priming of Human DCs

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PBMCs were isolated from buffy coats as described earlier and pan-DCs (including myeloid and plasmacytoid DCs) were further enriched by negative selection using EasySepTM human pan-DC pre-enrichment kit (STEMCELL Technologies) according to the manufacturer´s instructions. Cell purity of enriched live (fixable viability stain 780 from BD Biosciences), lineage negative cells (CD14 (clone M5E2, BD Biosciences), CD16 (clone 3G8, BD Biosciences), CD3 (clone UCHT1 BD Biosciences), CD20 (clone 2H7, Biolegend) or CD19 (clone HIB19, Biolegend), CD56 (clone MEM-188, Biolegend), but HLA DR+ (clone L243, Biolegend)) was confirmed by flow cytometry. Isolated DCs were seeded at 1 × 106 cells/ml in 96-well plates with 200 μl/well complete culture medium. Following 1–2 h rest, DCs were primed with 10% L. reuteri-CFS or were kept in RPMI as the control. Following 24 h incubation, cells were collected and washed twice with warm PBS and fresh medium with RA (1,15 μg/ml) or without RA was added. On day 4, the medium was replaced and on day 6 cells were re-activated with 10 μg/ml of Pam3SCK4 for 24 h. Supernatants were collected following 24 h priming with the first stimuli on day 1 and following 24 h stimulation with the second stimulus on day 7. Supernatants were stored at −20°C until further analysis.
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