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Nb100 56875

Manufactured by Novus Biologicals
Sourced in United States, Macao

The NB100-56875 is a laboratory centrifuge designed for general-purpose applications. It features a compact and durable construction, accommodating a wide range of sample types and volumes. The centrifuge is equipped with a microprocessor-controlled system for precise speed and time settings.

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7 protocols using nb100 56875

1

Purification and Characterization of SNAP-25

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Molecular biology reagents were obtained from New England Biolabs (Beverly, MA, U.S.A.), the vector expressing His6-SNAP-25b from pET-15b was a gift from Dr. James McNew (Rice University, TX, U.S.A.), recombinant alpha-CaMKII and calmodulin were gifts from Dr. M. Neal Waxham (University of Texas Medical School at Houston, TX, U.S.A.), Glutathione sepharose beads was obtained from Amersham Biosciences (Piscataway, New Jersey, U.S.A.), Ni-NTA agarose was from Qiagen (Hilden, Germany). Anti-SNAP-25 monoclonal antibody (Cl 71.1) was obtained from Synaptic Systems (Göttingen, Germany), monoclonal antibodies against CtBP2 and Munc18 were obtained from BD Biosciences (San Jose, CA, U.S.A.) and against PSD-95 (7E3-1B8) from Pierce/Thermo Fisher Scientific (Waltham, MA). Polyclonal rabbit antibody against glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (NB100-56875) was obtained from Novus Biologicals (Littleton, CO).
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2

Western Blot Analysis of OX1R in Hippocampus

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Hippocampal tissue was micro-dissected and protein extraction was performed using a RIPA commercial protein extraction kit (Thermo Fisher Scientific, Rockford, IL) [33 (link)]. Protein quantification was determined using a Bradford assay (BioRad, Hercules, CA) and samples (10 μg per well) were separated on 10% Criterion TGX gel (BioRad) and then transferred to PVDF membrane, and blocked (Super Blocker; Thermo Fisher Scientific) using Snap ID system (Millipore, Billerica, MA). Antibodies: OX1R (ab68718, Abcam, Cambridge, MA) and GAPDH (NB100-56875; Novus) primary; HRP conjugated anti-rabbit IgG (NB710H, Novus, Littleton, CO) secondary. All primary antibodies were used at a 1:1000 dilution, while secondary antibodies were used at a final dilution of 1:60,000. Protein samples were visualized and band density was determined (LICOR Image Studio Lite 3.1, Lincoln, NE). Data were normalized to GAPDH [36 (link),37 (link)], and analyzed using unpaired t-test using GraphPad Prism.
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3

Exosome Marker Identification Protocol

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To identify the exosome markers, the exosomes were extracted with RIPA lysis buffer (89900; Thermo Fisher Scientific) containing a protease inhibitor (87786; Thermo Fisher Scientific). The exosome lysates were mixed with LDS Sample Buffer (B0007; Thermo Fisher Scientific) and boiled at 95°C for 5 minutes. Then, 25 μg of protein was electrophoresed on 4%–12% Bis-Tris Plus gels (NP0335; Thermo Fisher Scientific) with MOPS SDS running buffer (B0001, NuPAGE; Thermo Fisher Scientific). The polyvinylidene fluoride membranes (LC2002; Thermo Fisher Scientific) were blocked with 5% skimmed milk for 1 hour at room temperature. The cells were then incubated overnight with primary antibodies against glyceraldehyde-3-phosphate dehydrogenase (GAPDH, NB100-56875; Novus Biologicals), calnexin (NB100-1965; Novus Biologicals), CD9 (NBP1-28363; Novus Biologicals), CD81 (NBP1-44861; Novus Biologicals), flotillin 2 (NBP1-30881; Novus Biologicals), and TSG101 (NB200-112; Novus Biologicals) at 4°C. The cells were then incubated with the horseradish peroxidase-conjugated secondary antibodies, anti-mouse immunoglobulin G (IgG, 31430; Thermo Fisher Scientific), and anti-rabbit IgG (31460; Thermo Fisher Scientific). Western blot development was performed using ECL (enhanced chemiluminescence) solution (2332638, EzWest Lumi plus; ATTO, Tokyo, Japan).
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4

Western Blot Analysis of VGLL3 Protein Expression

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Total cell lysates were isolated using cell lysis buffer (RIPA buffer: Cell Signaling Technology #9806, Danvers, MA) containing protease inhibitor cocktail (Roche, Nutley, NJ). Protein concentrations were determined by BCA assay (Sigma-Aldrich, St. Louis, MO). Proteins were separated by SDS-PAGE and transferred from gels to 0.2 μm nitrocellulose membranes (Pall Corporation, Washington, NY). The nitrocellulose membrane was further incubated overnight at 4°C with rabbit anti-VGLL3 (1:1000, Novus Biologicals, NB100-56875, Centennial, USA) and rabbit anti-GAPDH (1:2000, Novus Biologicals, 4650S, Centennial, USA). After that membranes were incubated with HRP-conjugated anti-Rabbit IgG (1:1000, Cell Signaling Technology, 7074S, Danvers, MA) secondary antibody for 1 hour at RT, protein bands were visualised using western blotting luminol reagent (Santa Cruz Biotechology, Inc., Dallas, Texas).
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5

Western Blot Analysis of Telomeric and Signaling Proteins

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Cells were collected in 1X PBS and spin down (250 g, 5 min) and pellet stored at -80 °C for further use. Whole cell lysates were prepared from cells by adding cell lysis RIPA buffer, complemented with phosphatase inhibitors (Roche) and kept 30 min on ice. For each sample, 30 μg of protein was resolved in a 4-15% gradient mini-protean precast polyacrylamide gels (BioRad) and transferred to nitrocellulose membranes (Whatman, GE Healthcare) for 1 h at 4 °C. After blocking for 1 h with 5% skim milk in PBST (0.1% Tween-20 in PBS), the membranes were incubated overnight at 4 °C with primary antibodies diluted in 5% milk. The following primary antibodies were used: TRF2, mouse monoclonal, (NB100-56506, 1:1000, Novus Biologicals); TRF2, rabbit monoclonal, (NB110-57130, 1:5000, Novus Biologicals); FOXO3a, rabbit monoclonal (clone 75D8, 1:1500, Cell Signaling Technology); GAPDH, rabbit polyclonal (1:2000, NB100-56875, Novus Biologicals). The membranes were then rinsed three times in PBST for 10 min and incubated 1 h at room temperature with appropriate secondary antibodies diluted (1:5000) in 5% PBST-milk (e.g. anti-mouse HRP IgG and anti-rabbit HRP IgG, Vector Labotratories). Membranes were developed using the Luminata Forte HRP substrate (Millipore) and exposed in the Fusion Solo apparatus (Vilbert Lourmat).
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6

Chondrocyte Protein Expression Analysis

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Chondrocytes were lysed with immunoprecipitation lysis buffer (Sigma‐Aldrich, MO) to extract total protein. BCA Protein Assay Kit (P0010, Beyotime, China) was used for the quantification of total protein. Protein extracts were subjected to 10% SDS‐PAGE, and transferred to polyvinylidene fluoride membranes. After blockade of 3% BSA, the membranes were incubated with primary antibodies FoxO3 (ab109629, Abcam, UK, 1:1000), COL2A1 (NB‐600‐844, Novus, MO, 1:1000), Sox9 (ab185966, Abcam, UK, 1:5000), ACAN (A11691, ABclonal, China, 1:500), ADAMTS5 (ab41037, Abcam, UK, 1:1000), Runx2 (ab236639, Abcam, UK, 1:1000), Bcl‐2 (ab32124, Abcam, UK, 1:1000), Bax (ab32503, Abcam, UK, 1:1000), PCNA (ab92552, Abcam, UK, 1:1000), and GAPDH (NB100‐56875, Novus, MO, 1:5000) at 4°C for 12 hours, and incubated with HRP goat anti‐rabbit IgG (AS014, ABclonal, China, 1:2000). The membrane was detected using BeyoECL Star (P0018AS, Beyotime, China). GAPDH was used as the internal reference.
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7

Protein Extraction and Western Blot Analysis

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Total protein of tissues or cells was extracted using RIPA lysis buffer (Beyotime, P0013B) with 1× Protease and Phosphatase Inhibitor Cocktail (Beyotime, P1048). The BCA protein assay kit (Beyotime, P0010S) was used to determine the protein concentration in the supernatant. 10 μg total protein was uploaded on sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) with 15% separation gel and transferred onto polyvinylidene fluoride (PVDF) membranes. The condition of primary antibodies of DNMT1 (Novus, NB100-56519, 1: 2,000), DNMT3A (Novus, NB120-13888, 1: 2,000), DNMT3B (Novus, NB300-516, 1: 2,000), REC8 meiotic recombination protein (REC8) (Proteintech, 10793-1-AP, 1: 2,000) and GAPDH (Novus, NB100-56875, 1: 5,000) incubating overnight as well as secondary antibody of goat anti-rabbit (Novus, VC002, 1: 5,000) or horse anti-mouse (Novus, MP-7500-NB, 1: 5,000) IgG-HRP incubating 2-h was carried out. BeyoECL Plus (Beyotime, P0018S) was used to develop the protein band. Image Pro-plus 7.0 was used to assess the protein expression levels.
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